GENSCAN 1.0	Date run:  4-Nov-116	Time: 14:19:54

Sequence gi568815596r:47590719_47791246 : 200528 bp : 45.61% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   8829   8998  170  2  2  106   53   107 0.726   8.03
 1.02 Intr +  16674  16863  190  0  1   99   71    46 0.207   3.59
 1.03 Term +  21322  21420   99  0  0   36   54    84 0.120  -2.07
 1.04 PlyA +  23159  23164    6                               1.05

 2.00 Prom +  23985  24024   40                              -1.36
 2.01 Init +  36499  36587   89  0  2   87   94    71 0.355   7.71
 2.02 Term +  60801  60849   49  0  1  113   48    42 0.049  -0.52
 2.03 PlyA +  61587  61592    6                               1.05

 3.05 PlyA -  61704  61699    6                               1.05
 3.04 Term -  68791  68595  197  2  2   97   44   103 0.932   4.37
 3.03 Intr -  69462  69313  150  1  0   45   65   126 0.972   6.13
 3.02 Intr -  69813  69713  101  2  2   66   75    93 0.981   5.55
 3.01 Init -  95563  95448  116  1  2   76   84    89 0.760   6.98
 3.00 Prom -  99773  99734   40                              -6.76

 4.02 PlyA -  99968  99963    6                               1.05
 4.01 Sngl - 100528  99998  531  1  0   87   43   906 0.998  82.07
 4.00 Prom - 119554 119515   40                              -3.66

 5.07 PlyA - 125643 125638    6                               1.05
 5.06 Term - 144953 144851  103  1  1  115   31    98 0.054   4.55
 5.05 Intr - 154638 154501  138  2  0   16  109   117 0.280   6.18
 5.04 Intr - 167051 166964   88  0  1   84   97    59 0.079   5.43
 5.03 Intr - 172083 171996   88  0  1   62   19    51 0.020  -4.86
 5.02 Intr - 181521 181426   96  0  0   63  106    56 0.333   5.11
 5.01 Init - 192811 192353  459  1  0   84   62   200 0.753  12.86
 5.00 Prom - 197495 197456   40                              -2.56

 6.00 Prom + 198598 198637   40                              -7.86
 6.01 Init + 200246 200405  160  1  1  109  110    74 0.569  11.69

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  72418  72366   53  1  2   65   65    26 0.800  -1.36


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:47590719_47791246|GENSCAN_predicted_peptide_1|152_aa
MEIIRTTCPGVSSHLSELACWPLCARQLLEGIHDQHQHLPVAVPADKAVITDGGTMRPYS
HPKHTAPDTELGMCGLSLALAELPAPAGHLASFSGEGPASRTPTASTTPAEFQPLLSRLQ
KAEKREPDISVFQETLSDRKCEPEIGLVPCYN

>gi568815596r:47590719_47791246|GENSCAN_predicted_CDS_1|459_bp
atggagataatccggaccacctgccctggtgtctcttctcatctctcagagctcgcatgc
tggccgctgtgtgccaggcagctcctggagggcattcatgatcagcaccagcatcttcct
gtggctgtcccagcagataaagcagttattactgatggagggacaatgagaccctactcc
cacccgaaacacacagcccctgacacagagctgggcatgtgtgggctctcactagcgctg
gctgaactgcctgcaccggcagggcatctggcctccttcagcggagagggcccagcaagc
aggactccgaccgcctccactactccagctgaattccagcccctgctctcccgtctccag
aaggcagagaagagggaacccgacatctcagtctttcaggaaacattaagtgacagaaaa
tgtgaacctgagatcggcttggtgccctgctataactga

>gi568815596r:47590719_47791246|GENSCAN_predicted_peptide_2|45_aa
MMKRDFQGAVGGMEEKTSYGPGQRQGGLNRALSKPFFLWGRVPVT

>gi568815596r:47590719_47791246|GENSCAN_predicted_CDS_2|138_bp
atgatgaagagggactttcaaggtgcagttggagggatggaagagaagacaagttatggt
ccaggacaaagacaaggaggcctgaacagggctctgtcgaagcccttcttcctctggggc
agggtgccggtcacttga

>gi568815596r:47590719_47791246|GENSCAN_predicted_peptide_3|187_aa
MWFLACFQLKVSEKIVKDVGIWRNFRMSYVLCQVLFQVLPVTKKVKKNRLYCDCFSLWED
CLANWEVKPDEKGHNGKVRATGKKVPGVDKNKETVIPAKRKDRPFQRETEQKAMMYDLQA
TCAVHRVASPMGYGQGLKAKATNMCGSPQGTLLILSDYGCAFTVWGEDVPLEALMVKFQD
YHNLALL

>gi568815596r:47590719_47791246|GENSCAN_predicted_CDS_3|564_bp
atgtggtttctggcctgttttcaattgaaggtgtcagaaaaaattgtgaaagacgttgga
atatggagaaatttccggatgtcctatgtcctgtgccaggtactcttccaggttctgcca
gttaccaaaaaggtaaagaagaaccgcctgtactgtgactgcttctccttatgggaagac
tgtttagctaactgggaagtcaaacctgatgaaaaaggccacaacggcaaagttagagcc
acaggaaaaaaagttccaggagttgacaaaaataaggagacagttatcccagccaagcga
aaagatagaccttttcaaagggaaacagaacagaaggcaatgatgtatgacctgcaagcc
acgtgtgccgtacaccgagttgccagccccatgggatatggccagggcctcaaggcaaag
gctaccaacatgtgtgggtctcctcagggcacactccttattttgtctgactatgggtgt
gcatttacagtctggggtgaagatgtgcctctagaagcactaatggtgaagtttcaggac
tatcacaacctggccttgctctag

>gi568815596r:47590719_47791246|GENSCAN_predicted_peptide_4|176_aa
MKASGTLREYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGE
IVYCGQVFEKFPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTRCYRDMSARHGGR
AHSIQIMKVEEIAASKCRRPAVKQFHDSKIKFPLPHRVLRRQHKPRFTTKRPNTFF

>gi568815596r:47590719_47791246|GENSCAN_predicted_CDS_4|531_bp
atgaaggcctcgggcacactacgagagtacaaagtagtgggtcgctgcctgcccaccccc
aaatgccacacaccacccctctaccgcatgcgaatctttgcgcctaatcatgtcgtcgcc
aagtcccgcttctggtacttcgtatctcagttaaagaagatgaagaagtcttcaggggag
attgtctactgtgggcaggtgtttgagaagttccccttgcgggtgaagaacttcgggatc
tggctgcgctatgactcccggagcggcacccacaacatgtaccgggaataccgggacctg
accaccgcaggcgctgtcacccggtgctaccgagacatgagcgcccggcacggcggccgg
gcccactccattcagatcatgaaggtggaggagatcgcggccagcaagtgccgccggccg
gctgtcaagcagttccacgactccaagatcaagttcccgctgccccaccgggtcctgcgc
cgtcagcacaagccacgcttcaccaccaagaggcccaacaccttcttctag

>gi568815596r:47590719_47791246|GENSCAN_predicted_peptide_5|323_aa
MPPPSTPPPPRYLVGAAGATDLRSPPLRFFALGGDAERAKGLGPGPASLQAASPPGEGEA
PGAAAARPPSREALAEALLASLSAGDLGKKLYRVLCRDIPTAGKAQPFCRTELLKAPHLP
RGSCWREIWGEARSAGGTRAPVANQQAPRRARASLCTGFALCPVLSVPDFTLLAPSHPSR
LRQSKRTLTNTIITIEKQKRKEEVKMKHPILNNSNGEGEIRKSPKDSQESNCWQIPWVGG
VSGSTKQLMEPTKTKEIRRYNAKRNRALDLKEIAHNTSDSIRKTETPKSSFFTYFFPQFD
QFLIRKLFSLSANKLMNILFIDV

>gi568815596r:47590719_47791246|GENSCAN_predicted_CDS_5|972_bp
atgcccccgccttcgaccccacccccaccccgctacctggtgggggcagcaggcgctacc
gatctccgcagccctccgttgaggttcttcgccttgggcggtgacgcggagcgcgccaag
ggcctgggcccaggcccagcctcgctccaggccgcatccccgcctggggaaggagaggcc
ccgggggcagcggcggcacggccgccttcgcgtgaggccctggccgaggccttgttggca
tcactcagcgccggagacttggggaagaagctgtacagggtgctctgtcgcgacataccg
acagccggcaaggcccaaccgttctgtcggacggagctcctaaaagcaccgcatctaccg
cgcggctcctgctggcgggaaatctggggggaggcgcgctccgccggaggaacccgggcc
ccagtggccaatcaacaggcgcctcgccgtgcgcgggcgagcctctgcactggctttgcc
ctctgtccagtgctctctgtccccgactttacattgctggctccttctcatccttcacgt
cttcggcaatctaaaagaacgctgactaatacaataataacaattgaaaaacagaaaagg
aaggaagaagtgaaaatgaagcatcccattctcaacaactcaaatggagaaggtgagatt
aggaaaagtcctaaagatagtcaagaatccaactgctggcagattccatgggtaggagga
gtttctggaagcacaaagcaactcatggaacccactaaaaccaaagagattaggcgatac
aatgcaaaaaggaatagagctttagacctgaaagaaattgcccacaacacttcagactcc
ataaggaaaacagaaactccaaaaagcagcttcttcacttatttcttcccccagtttgat
cagttcctcattagaaagctcttcagcctcagtgccaacaagctcatgaatatcctcttt
attgatgtctaa

>gi568815596r:47590719_47791246|GENSCAN_predicted_peptide_6|54_aa
MEGYPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTX

>gi568815596r:47590719_47791246|GENSCAN_predicted_CDS_6|162_bp
atggagggttacccctggtggccttgtctggtttacaaccacccctttgatggaacattc
atccgcgagaaagggaaatcagtccgtgttcatgtacagttttttgatgacagcccaaca
aggggctgggttagcaaaaggcttttaaagccatatacagnn