GENSCAN 1.0	Date run:  3-Nov-116	Time: 08:23:45

Sequence gi568815596r:25828981_26081917 : 252937 bp : 45.03% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 Intr -  16583  16501   83  2  2   92  109    48 0.559   5.74
 1.01 Init -  27959  27723  237  2  0   58   85   357 0.831  30.41
 1.00 Prom -  46162  46123   40                              -2.96

 2.00 Prom +  56086  56125   40                              -4.86
 2.01 Init +  57216  57384  169  2  1   92  107   134 0.623  15.40
 2.02 Term +  60153  60196   44  1  2  133   36    28 0.597  -0.58
 2.03 PlyA +  60226  60231    6                               1.05

 3.13 PlyA -  60327  60322    6                               1.05
 3.12 Term -  82643  82540  104  0  2   75   37   158 0.315   7.84
 3.11 Intr -  86632  86496  137  0  2   67   15    48 0.222  -4.39
 3.10 Intr -  86949  86697  253  1  1   47   97   138 0.317   7.09
 3.09 Intr -  89020  88912  109  1  1   51   76    64 0.132   1.36
 3.08 Intr - 101083 100975  109  0  1   43   90   146 0.020  10.59
 3.07 Intr - 122925 122809  117  2  0   99   67   231 0.111  21.68
 3.06 Intr - 125405 125287  119  2  2   54   30   273 0.998  17.36
 3.05 Intr - 126683 126561  123  2  0   69  100   249 0.999  24.98
 3.04 Intr - 127464 127363  102  0  0  105   91   168 0.987  19.17
 3.03 Intr - 128697 128645   53  1  2   77   96    40 0.888   2.33
 3.02 Intr - 130841 130814   28  2  1   90   79    35 0.193   0.49
 3.01 Init - 144821 144735   87  2  0   92   42   151 0.448   9.54
 3.00 Prom - 145584 145545   40                              -3.26

 4.02 PlyA - 146353 146348    6                              -0.45
 4.01 Sngl - 152937 151321 1617  0  0   95   54  2718 0.956 263.64
 4.00 Prom - 163323 163284   40                              -8.56

 5.03 PlyA - 165153 165148    6                               1.05
 5.02 Term - 165859 165765   95  2  2  134   36   171 0.956  14.49
 5.01 Init - 180362 180329   34  2  1   99   62    14 0.120  -0.07
 5.00 Prom - 180577 180538   40                              -4.26

 6.02 PlyA - 180720 180715    6                               1.05
 6.01 Sngl - 199632 199225  408  0  0   87   38   415 0.927  30.69
 6.00 Prom - 199823 199784   40                              -9.16

 7.03 PlyA - 199948 199943    6                               1.05
 7.02 Term - 205762 205473  290  2  2   80   55   296 0.907  21.04
 7.01 Init - 225773 225704   70  2  1   70   66    43 0.294   1.51
 7.00 Prom - 231262 231223   40                              -1.96


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 122925 122805  121  2  1   99   47   247 0.886  19.65


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_1|107_aa
MRYRTLSQLPPRLVSIEDPFDQNDWATWTSFLSGVDIQIVGDDLTVTNPKRIAQSFEKKV
CSCLLLKVNQIGSVTESIQVLEKYPNTPMSHKEILQVIQREGLKEIS

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_1|321_bp
atgaggtataggacactgtcccagctgccacctagactcgtctccatcgaggaccccttt
gaccagaatgactgggccacttggacctcgttcctctcaggggtggacatccagattgtg
ggggatgacctgacagtcaccaaccccaagaggattgcccagtcctttgagaagaaggtc
tgcagctgtctgctgctgaaggtcaaccagatcggctcggtgactgaatcgatccaggtc
ttagaaaaataccccaatacacccatgagtcataaagaaattcttcaagttatccagaga
gaaggactaaaagaaatcagn

>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_2|70_aa
MVAGMEATNGPNTVGSHSPLNFYLLLLLNVQSASKKDENQPPDLTPSLKYTNQPLGGVDP
EGTSNELPTC

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_2|213_bp
atggtggcaggaatggaggctacaaatggacccaacaccgtgggttcccactcaccactg
aacttttacctactactgctactgaatgtccaatctgccagcaagaaagatgaaaaccaa
ccccctgatttgacaccatccctcaagtacaccaatcagccacttggaggtgttgatcct
gaaggcacctctaatgaacttcccacatgctag

>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_3|446_aa
MGLPILLLIALFLCPGLLLVTREYELWKQVPQMIGPHDSGLLLPKSDSTPCFEIPQAMES
KLLIGGRNIMDHTNEQQKMLELKRQEIAEQKRREREMQQEMMLRDEETMELRGTYTSLQQ
EVEVKTKKLKKLYAKLQAVKAEIQDQHDEYIRVRQDLEEAQNEQTRELKLKYLIIENFIP
PEEKNKIMNRLFLDCEEEQWKFQPLVPAGVSSSQMKKRPTSAVGYKRPISQYARVAMAMG
SHPRYRPQLYALALFLFTVHALYSLGSGLFAKSKRLSQEQSQDPGAQLASPSGSPTGAAG
GAACQSRAVCLHSSALGWSMGLGAVEQEAALIGEARAAQEPTEWRGGSGMVGCRSRALPG
GKAAKARASRPAALSAGSAGATPTRNSRWPASTAYSPGSRPRLSLHTSPQAEVYVYRYRY
LYLYLSHAEPKLDCTAAISAHCNLPA

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_3|1341_bp
atgggcctccctatcctactgctgattgcactgtttttgtgtcctggattgttgctggta
accagggagtacgaattatggaagcaggttccccagatgatcgggccccatgacagtggt
ctcctgctccccaagtctgacagcaccccctgctttgagatccctcaggccatggagagc
aagctcctcatcgggggcaggaacatcatggatcacaccaacgaacagcagaagatgttg
gaactgaagaggcaggagattgccgagcagaaacgtcgtgagcgggagatgcagcaggag
atgatgctccgggacgaggagactatggagctccggggcacctacacatccctgcagcag
gaggtggaggtcaaaaccaagaaactcaagaagctctacgccaagctgcaggcggtgaag
gcggagatccaggaccagcatgatgagtatatccgcgtgcggcaggacctggaggaggcg
cagaacgagcagacccgcgaactcaagctcaagtacctaatcatcgagaacttcatcccg
ccggaggagaagaacaagatcatgaaccggcttttcctggactgtgaggaggagcagtgg
aagttccagccactggtgccagccggcgtcagtagcagccagatgaagaagcggccaaca
tctgcagtgggctacaagaggcctatcagccagtatgctcgggttgccatggcaatgggg
tcccaccccaggtacaggccacagctgtatgcactggccctgttcctgttcacagtgcat
gctctgtattccttaggctctggtctctttgcaaagtccaagcgtctcagccaggagcag
agccaagacccaggagcccagctggcttcacccagtggatcccccacgggggctgcaggt
ggagctgcctgccagtcccgcgccgtgtgcctgcactcctcagcccttggatggtcgatg
ggactgggcgccgtggagcaggaggcggcgctcatcggggaggctcgggccgcacaggag
cccacggagtggcggggaggctcaggcatggtgggctgcaggtcccgagccctgcccggc
gggaaggcagctaaggcccgggccagccggccggctgctctgagtgcagggtccgccggg
gccacgcccacccggaactcgcgctggcccgcaagcaccgcgtacagccccggttcccgc
ccgcgcctctccctccacacctccccgcaagctgaggtctacgtctaccgctaccgctac
ctctacctctacctctcccatgccgagccgaagctggactgtactgctgccatctcggct
cactgcaacctccctgcctga

>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_4|538_aa
MASKTKASEALKVVARCRPLSRKEEAAGHEQILTMDVKLGQVTLRNPRAAPGELPKTFTF
DAVYDASSKQADLYDETVRPLIDSVLQGFNGTVFAYGQTGTGKTYTMQGTWVEPELRGVI
PNAFEHIFTHISRSQNQQYLVRASYLEIYQEEIRDLLSKEPGKRLELKENPETGVYIKDL
SSFVTKNVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFIITVECSERGSDGQDHIRVG
KLNLVDLAGSERQNKAGPNTAGGAATPSSGGGGGGGGSGGGAGGERPKEASKINLSLSAL
GNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFAN
RAKNIKNKPRVNEDPKDTLLREFQEEIARLKAQLEKRGMLGKRPRRKSSRRKKAVSAPPG
YPEGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEKAAIQDDRS
LVSEEKQKLLEEKEKMLEDLRREQQATELLAAKYKVRAPEELGTRDVPAGDPGKEALL

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_4|1617_bp
atggccagtaagaccaaggccagcgaggccctcaaggtggtggcccggtgccgccccctc
agcaggaaggaggaggctgctggtcacgagcagatcctgaccatggacgtgaaactgggc
caggtgaccctgcggaacccccgcgccgccccgggggagctgcccaagaccttcaccttt
gacgccgtgtatgatgccagctccaagcaggccgacctgtatgacgaaaccgtgaggccc
ctgatagactccgtgctccagggtttcaatggcacggtgtttgcctatggccagacgggc
actggcaagacctataccatgcaggggacctgggtggagcccgagctgcgcggggtcatc
ccgaatgcctttgagcacatcttcacccacatctcccgctcccagaaccaacagtacctg
gtccgggcctcctatttggagatctaccaggaagagattcgagacctgctctccaaggag
ccgggcaagaggctagagctgaaagagaaccccgagactggcgtctacatcaaggacctc
tcctccttcgtcaccaagaatgtcaaggagattgagcatgtgatgaacctggggaaccag
acccgggctgtgggcagcacccacatgaatgaggtcagctcccgctcccatgccatcttc
atcatcactgtggagtgcagcgaacgtggctctgatggccaggaccacatccgagtgggc
aagctcaacctcgtggacctggctggcagcgagaggcagaacaaggcaggccccaacaca
gcgggaggggcagccacaccatcctcgggtggcggtggtggcggtggaggcagtggtggt
ggtgctggtggagagaggcctaaggaagcctccaaaatcaacctctcattatctgccctg
ggcaacgtgattgctgccctggcgggcaacaggagcacccacattccctaccgggactcc
aagctgacccggctgctccaggactccctgggggggaatgccaagaccatcatggtagcc
acactggggccagcttctcacagctacgatgagagcctctccaccttgcgctttgccaac
cgagccaagaacatcaagaacaagccccgggtgaacgaggaccccaaggacacactgctg
cgggaattccaagaggagattgcccgcctgaaggcccagctggagaagagggggatgctg
gggaagcggccccggaggaagagcagccgcaggaagaaggccgtgtccgccccgcctggg
taccctgagggcccagtgattgaggcctgggtggcagaagaggaggatgacaacaacaac
aaccaccgcccgccccagcccatcctggagtcagccttggagaagaacatggagaattac
ctgcaggaacagaaggagcggctggaggaggagaaggcagccatccaggatgaccgcagc
ctggtgagcgaggagaagcagaagctgctggaggagaaggagaagatgctggaggacctg
cggcgggaacagcaggccacagagctgcttgcggccaagtacaaggtaagggccccagag
gagctgggcactcgagatgtccccgcaggggatcccggcaaggaggctcttctttga

>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_5|42_aa
MPVMVRDKKNFGSPDSVSIFRSSSSPMSGYGSGFNTSSNCGT

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_5|129_bp
atgcctgtcatggtcagggataaaaagaactttggatctccagactcggtcagcatcttt
cgctcgtcctccagtcctatgtctggctacggttctggattcaacacgagcagcaactgc
ggcacctaa

>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_6|135_aa
MKLLTHNLLSSHVRGMGSRGFPLCLQATEVRICPVEFNPQFMWHHTWHVSYVVHMIPKVE
WSAFLEAADSLRLIQMPKGPVEGYEENEEFLRTMHHLLLEVEVIEGTLQCPESGRMFPIS
RGIPNMLLSEEETES

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_6|408_bp
atgaaactgctcacccacaatctgctgagctcgcatgtgcgggggatggggtcccgtggc
ttccccctgtgcctccaggccaccgaggtccgtatctgccctgtggagttcaacccccaa
tttatgtggcatcatacgtggcacgtatcatacgtggtacatatgatacctaaggtggag
tggtcggcgttcctggaggcggccgatagcttgcgcctgatccagatgcctaaagggcca
gttgagggatatgaggagaatgaagagtttctgaggaccatgcaccacctgctgctggag
gtggaagtgatagagggcaccctgcagtgcccggaatctggacgtatgttccccatcagc
cgcgggatccccaacatgctgctgagtgaagaggaaactgagagttga

>gi568815596r:25828981_26081917|GENSCAN_predicted_peptide_7|119_aa
MLTTGESGRSKGIHRNECSNFPAGLTYGGNKGSIEGIIRKTKKDAGLPHSGIPDQEQLEK
QVVRLLRHWEERLGLSPPAAPRDRSLSLRPTPHSGVLRPEDRGSVGKRLETARATYEQL

>gi568815596r:25828981_26081917|GENSCAN_predicted_CDS_7|360_bp
atgctgacaactggtgaatctggaagatctaaggggattcatcgtaatgagtgttctaac
tttcctgcaggtcttacctatggtggaaataaaggtagtattgaaggcatcatccgaaaa
acgaaaaaggacgcaggtcttccccactccggaatccccgatcaggagcagcttgaaaag
caggtcgtacgtcttcttcgccattgggaggagcggctcgggctctcgccgccggcggcc
ccaagggatcggtccctctcactacggccaactcctcactcgggcgttctcaggccggag
gaccggggaagcgtgggaaaaaggctcgagacggcgcgggcgacctacgaacagctttga