GENSCAN 1.0	Date run:  6-Nov-116	Time: 18:11:06

Sequence gi568815596r:187246187_187485595 : 239409 bp : 33.71% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   9229   9419  191  0  2   54   49   148 0.085   4.96
 1.02 Intr +  18731  18786   56  2  2   90   59    50 0.423   0.00
 1.03 Intr +  20386  20502  117  2  0   64   65    64 0.236   1.22
 1.04 Term +  20867  21027  161  0  2   15   48   178 0.620   3.62
 1.05 PlyA +  23024  23029    6                               1.05

 2.02 PlyA -  23043  23038    6                               1.05
 2.01 Sngl -  30620  30450  171  2  0   57   48   160 0.840   3.48
 2.00 Prom -  41953  41914   40                              -3.65

 3.00 Prom +  53318  53357   40                              -3.75
 3.01 Sngl +  82667  82936  270  1  0   87   38   204 0.742  10.33
 3.02 PlyA +  84038  84043    6                               1.05

 4.04 PlyA -  84093  84088    6                               1.05
 4.03 Term - 100213  99998  216  1  0   77   48   138 0.900   4.86
 4.02 Intr - 106146 105928  219  0  0   94   80   198 0.957  17.18
 4.01 Init - 111542 111537    6  2  0   61   66    17 0.126  -3.27
 4.00 Prom - 114914 114875   40                              -5.85

 5.00 Prom + 118537 118576   40                              -4.65
 5.01 Init + 119608 119657   50  0  2   69   97     3 0.281   0.00
 5.02 Term + 131790 132048  259  0  1    9   47   452 0.870  27.24
 5.03 PlyA + 132758 132763    6                               1.05

 6.06 PlyA - 133076 133071    6                               1.05
 6.05 Term - 133658 133596   63  2  0  100   55    26 0.930  -2.59
 6.04 Intr - 134393 134281  113  0  2   67   95    36 0.945   1.38
 6.03 Intr - 134601 134491  111  1  0   30   98    85 0.880   3.13
 6.02 Intr - 137106 136987  120  1  0   62  121    72 0.546   7.45
 6.01 Init - 138801 138783   19  0  1   73  102    30 0.447   3.22
 6.00 Prom - 139747 139708   40                              -3.55

 7.00 Prom + 150591 150630   40                              -4.35
 7.01 Init + 155735 155859  125  1  2   66   99    60 0.906   4.59
 7.02 Term + 159464 159659  196  2  1   48   50   147 0.851   2.80
 7.03 PlyA + 160329 160334    6                               1.05

 8.00 Prom + 168204 168243   40                              -2.05
 8.01 Init + 169345 169656  312  0  0   42   69   405 0.079  31.37
 8.02 Term + 189035 189241  207  1  0   58   37   113 0.001  -0.44
 8.03 PlyA + 190357 190362    6                               1.05

 9.06 PlyA - 190687 190682    6                               1.05
 9.05 Term - 210941 210794  148  1  1   21   47   202 0.674   5.79
 9.04 Intr - 215609 215429  181  0  1   89   25    58 0.001  -2.40
 9.03 Intr - 221746 221567  180  2  0   75   75    46 0.009   0.92
 9.02 Intr - 238030 237938   93  2  0   85   91    44 0.859   3.42
 9.01 Intr - 238801 238625  177  2  0   58   91   164 0.985  12.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 169345 169812  468  0  0   42   50   428 0.908  30.28


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_1|174_aa
SVLLLTKNTLTVKQPHIGLSGDIPEKGIVIIGKENSMPVIIPENLLVKQAVEVKDSDADD
PDPVGDGHIGVGNRRAEEREKGWTTVMEQNSTQVTWGPANRKCQPGICVLSLRRKEMDGS
EASGRCIQINPTENQEQDAGQVGDTICAQNAEALASHAKVLTLEQHEAMKDSRQ

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_1|525_bp
agtgtactcctacttactaaaaatacattaactgtaaaacagcctcacataggtctttca
ggagatattccagaaaaaggcattgtcatcatagggaaagagaattctatgcctgttatt
atccctgaaaaccttctagtgaaacaagctgtggaagtcaaagacagtgatgcagatgat
cctgaccctgttggggacgggcacattggtgtgggaaataggagagctgaagagagagag
aaggggtggactactgtcatggaacagaattccactcaggtaacatggggcccagccaat
cgcaaatgccaaccaggcatttgtgtgctgtctttaagaagaaaggagatggatgggtct
gaggccagtgggagatgcatacagataaatccaacagagaatcaggagcaagatgcagga
caagtcggagatacaatttgtgctcagaatgccgaggcccttgccagccatgcaaaggtc
ttaaccctagagcagcatgaagccatgaaggattctaggcagtga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_2|56_aa
MAKETLPLTLQKQENTLGDYYKHLYEHKLENLEETDKILETCNLPRLKKEETETPN

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_2|171_bp
atggcaaaggaaacattgccactgaccctgcagaaacaggaaaacacccttggagactat
tacaaacacctctatgaacacaaactagaaaacttagaagaaacggataaaatcctagaa
acatgcaacctcccaagattgaaaaaggaagaaactgaaacacctaactga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_3|89_aa
MEPSRAVCRGNVRLEPPHRVPTGALPSGAVRRGPLPSRPENGRSIDSLHHASGKAAGTQC
QPVKGAMGPVPYRTTGVELPKDLEIYSLC

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_3|270_bp
atggagccctctagggcagtgtgcaggggaaatgtgaggttggagcccccacacagagtt
cccactggggcactgcctagtggtgctgtgagaagaggaccactgccctccagacctgag
aatggcagatccattgacagcttgcaccatgcatctggaaaagctgcaggcactcaatgc
cagcctgtgaaaggagccatggggcctgtaccctacagaaccacaggagtggaactgccc
aaggacttggaaatttattccttgtgttag

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_4|146_aa
MLVNLFFLLNIVRVLITKLKVTHQAESNLYMKAVRATLILVPLLGIEFVLIPWRPEGKIA
EEVYDYIMHILMHFQVQAILRRNWNQYKIQFGNSFSNSEALRSASYTVSTISDGPGYSHD
CPSEHLNGKSIHDIENVLLKPENLYN

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_4|441_bp
atgctggtgaatctttttttcttgttaaatattgtacgcgttctcatcaccaagttaaaa
gttacacaccaagcggaatccaatctgtacatgaaagctgtgagagctactcttatcttg
gtgccattgcttggcattgaatttgtgctgattccatggcgacctgaaggaaagattgca
gaggaggtatatgactacatcatgcacatccttatgcacttccaggttcaagcaattctg
agaagaaactggaatcaatacaaaatccaatttggaaacagcttttccaactcagaagct
cttcgtagtgcgtcttacacagtgtcaacaatcagtgatggtccaggttatagtcatgac
tgtcctagtgaacacttaaatggaaaaagcatccatgatattgaaaatgttctcttaaaa
ccagaaaatttatataattga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_5|102_aa
MNRKKDCMLSLTCGSFNRRRKLEEEGGVGRGIREEEEEEEKEEQEEGEGEEETRKRRRRR
RKKKNKKKEKEKKKEEREGAAVAVAATGAKGAEDDYNAMKIQ

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_5|309_bp
atgaacagaaagaaagactgcatgctctcactcacttgtggaagctttaatagaagaagg
aagttggaggaagaaggaggggtaggaagaggaataagagaagaggaggaggaggaggaa
aaagaagaacaagaagaaggagaaggagaagaagaaacaagaaagagaaggaggaggagg
aggaaaaagaagaacaagaagaaggagaaggagaagaagaaagaagaaagagaaggagca
gcagtggcggtggcagccacaggagcaaaaggagcagaagatgactacaatgcgatgaag
atacaatga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_6|141_aa
MGPKVEAELEESPEDSIQLGVTRNKIMTAQYECYQKIMQDPIQQAEGVYCNRTWDGWLCW
NDVAAGTESMQLCPDYFQDFDPSEKVTKICDQDGNWFRHPASNRTWTNYTQCNVNTHEKV
KLFDLEKAILHLSASVPSYMK

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_6|426_bp
atggggcccaaggtggaagcagaattagaagagagtcctgaggactcaattcagttggga
gttactagaaataaaatcatgacagctcaatatgaatgttaccaaaagattatgcaagac
cccattcaacaagcagaaggcgtttactgcaacagaacctgggatggatggctctgctgg
aacgatgttgcagcaggaactgaatcaatgcagctctgccctgattactttcaggacttt
gatccatcagaaaaagttacaaagatctgtgaccaagatggaaactggtttagacatcca
gcaagcaacagaacatggacaaattatacccagtgtaatgttaacacccacgagaaagtg
aagctgtttgaccttgaaaaagccattttacatctctctgcttcagtcccctcatatatg
aaatga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_7|106_aa
MEKRNQGKKEGRKEEGKEGRKEEGKEGRKAGRKERNQYVYLRGRAKPVKLKVWDSLPGIS
TRLLVGDKFVQGDKMQTAETVRKKSLQPAIKLSRKFVSLEEWLLCS

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_7|321_bp
atggaaaaaagaaatcaaggaaagaaggaaggaagaaaggaagaagggaaggaaggaaga
aaggaagaagggaaagaaggaaggaaggcaggaaggaaggagagaaatcaatatgtgtat
ctcagaggaagagcaaaaccagtgaaactgaaggtgtgggattcattacctggaattagc
actcggttattagttggagataaatttgtgcaaggagataaaatgcagacggctgaaaca
gtaagaaagaaaagcttgcagccagcaattaagcttagcagaaagtttgttagtttggag
gaatggctgctgtgttcctga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_8|172_aa
MFGTGNSANVSVVDLTCRLEKPANYDDVKKVVNQASEGPLKDILGYTEHQVVSSDFNSDT
HSSTFSEGAGIALNDHFVKLISLYDNEFGYTNRVVDHGPHGLQKSLRKSTIMTKGELTYP
HISYLVATEGAREGAERSYTLSNNQTLCELTKRELTYHQGDGARSFMREPSP

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_8|519_bp
atgtttgggacaggaaactctgccaatgtgtcagtggtggacctgacctgccgtctggaa
aaacctgccaattatgatgacgtcaagaaggtggtgaaccaggcatcggagggccccctc
aaggacattctgggctacactgagcaccaggttgtctcctccgacttcaacagtgacacc
cactcttccaccttcagtgagggggctggcattgctctcaacgaccactttgtcaagctc
atttccttgtatgacaatgaatttggctacaccaacagggtggtggatcatggtccacat
ggcctccagaaaagcctcaggaagtctacaatcatgacaaaaggggagctgacatatcct
catatctcctatctcgtggcaacagagggagcaagagagggagcagaaaggtcctatact
ctttcaaacaaccagactttgtgtgaactaactaagcgagaactcacttatcaccaaggg
gatggtgctaggtcattcatgagggagccatccccatga

>gi568815596r:187246187_187485595|GENSCAN_predicted_peptide_9|259_aa
XKPDFCFLEEDPGICRGYITRYFYNNQTKQCERFKYGGCLGNMNNFETLEECKNICEDGP
NGFQVDNYGTQLNAVNNSLTPQSTKVPSLFEFHGPSWCLTPADRGLCRANENRFYYNSVI
GKCRPFKYSGCGGNENNFTSKQECLRACKKVNGLLSCQCLSCALPLACSPRHPLDVRLLV
SSSADPLLWTSRRLCIYLPARVSVFIRPGWGLFRRTTIQKKALFIIRDDSSMRIIAPEDL
PVGQDVRVEDSDIDDPDHA

>gi568815596r:187246187_187485595|GENSCAN_predicted_CDS_9|780_bp
naaaagccagatttctgctttttggaagaagatcctggaatatgtcgaggttatattacc
aggtatttttataacaatcagacaaaacagtgtgaacgtttcaagtatggtggatgcctg
ggcaatatgaacaattttgagacactggaagaatgcaagaacatttgtgaagatggtccg
aatggtttccaggtggataattatggaacccagctcaatgctgtgaataactccctgact
ccgcaatcaaccaaggttcccagcctttttgaatttcacggtccctcatggtgtctcact
ccagcagacagaggattgtgtcgtgccaatgagaacagattctactacaattcagtcatt
gggaaatgccgcccatttaagtacagtggatgtgggggaaatgaaaacaattttacttcc
aaacaagaatgtctgagggcatgtaaaaaagtcaatggcctgctgtcctgccagtgtctg
tcatgtgctcttccactggcatgctcccctcgacatcctctcgatgtccggctgcttgtg
tcttcttccgctgatcccctcctctggacgtccagacgcttgtgtatctatctgcctgct
agggtctcagtttttatccgcccaggatgggggctgttcagaaggacgacaatccagaag
aaggcattgtttatcatcagagatgacagctccatgcgtattattgcccctgaagacctt
ccagtaggacaggatgtgagggtagaagacagtgatattgatgatcctgaccatgcgtag