GENSCAN 1.0	Date run:  4-Aug-121	Time: 20:39:11

Sequence gi568815596r:183507438_183708119 : 200682 bp : 36.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.07 PlyA -    286    281    6                               1.05
 1.06 Term -    707    648   60  2  0  109   42    67 0.234   1.03
 1.05 Intr -   2231   2130  102  2  0   73   92    62 0.186   4.55
 1.04 Intr -   3414   3313  102  0  0   80   55    52 0.254   0.55
 1.03 Intr -   4104   3989  116  1  2   74   97    98 0.852   8.55
 1.02 Intr -  17107  17056   52  1  1  105   93   -18 0.063  -2.04
 1.01 Init -  22096  22046   51  1  0  103  107    46 0.914   9.21
 1.00 Prom -  26783  26744   40                              -5.45

 2.00 Prom +  34160  34199   40                              -7.35
 2.01 Init +  36851  37166  316  1  1   50   71   200 0.975  12.04
 2.02 Intr +  38538  38771  234  1  0   47   22   206 0.658   6.64
 2.03 Intr +  39162  39340  179  1  2   27   59   155 0.668   5.22
 2.04 Term +  41826  42350  525  2  0   24   41   224 0.391   4.57
 2.05 PlyA +  42458  42463    6                               1.05

 3.00 Prom +  43219  43258   40                              -3.75
 3.01 Init +  64578  64666   89  2  2  100   76    71 0.840   7.27
 3.02 Term +  72320  72452  133  2  1   77   48    99 0.728   1.38
 3.03 PlyA +  73436  73441    6                               1.05

 4.00 Prom +  77031  77070   40                              -7.95
 4.01 Sngl +  79791  80267  477  2  0   88   38   449 0.987  35.74
 4.02 PlyA +  80663  80668    6                               1.05

 5.00 Prom +  81198  81237   40                              -6.15
 5.01 Sngl +  82464  83507 1044  2  0   37   41   367 0.620  23.78
 5.02 PlyA +  83654  83659    6                               1.05

 6.03 PlyA -  84452  84447    6                               1.05
 6.02 Term - 100593  99998  596  1  2    6   53   549 0.998  36.90
 6.01 Init - 100682 100613   70  2  1   92   51    86 0.411   6.56
 6.00 Prom - 109687 109648   40                              -4.65

 7.04 PlyA - 109804 109799    6                               1.05
 7.03 Term - 114024 113759  266  1  2   21   43   247 0.479   8.19
 7.02 Intr - 115324 115231   94  1  1   86   93    42 0.505   3.12
 7.01 Init - 117469 117374   96  1  0   75   58    44 0.272   0.46
 7.00 Prom - 129333 129294   40                              -3.65

 8.00 Prom + 152363 152402   40                              -3.65
 8.01 Init + 156228 156280   53  2  2   75   85    19 0.091   0.98
 8.02 Intr + 183914 184010   97  2  1  100   66    31 0.764   1.19
 8.03 Term + 184053 184271  219  2  0  123   48   156 0.957  11.16
 8.04 PlyA + 185448 185453    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_1|160_aa
MDHSRSIPEAKELAKGETHQQSIWSTFYVFPNLKGGQARVQVFENVSVRATKSDIPRSAL
WSRRKTSVSAAVLKEISKEISKGPQKPPGYRLCPLQAVGGGEFGPTRLSSRSITIRGIMG
QPVTRYFSHLLSCNWETLLQIDQGHQATDGLKNGTPNELN

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_1|483_bp
atggaccactcaaggagcataccagaagcaaaggagcttgcaaagggggagactcatcaa
caaagtatatggtcaacgttttatgtgttccccaatttgaaaggaggacaggcaagggtg
caggtttttgagaatgtgtccgtaagggccactaaatctgacattcctcggtccgccttg
tggtctaggaggaaaactagtgtttctgctgctgtgttgaaggaaataagcaaagaaatc
tccaaaggaccacaaaaacccccaggctatcggttatgtccccttcaagctgtaggggga
ggggaatttggcccaacccggctgtcctcaaggtccattaccatccgaggaatcatggga
cagcctgtaaccaggtatttctcccacctcctcagttgtaattgggagactttgctacag
atagatcaaggccatcaagctacagatggtcttaaaaatggaaccccaaatgagctcaac
taa

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_2|417_aa
MGRHLSAELDRHITQESSGWDLAGATLGRSFQGKEQAAIFAVLQPPLVIPRQTGSGVDLQ
QTPTDLQQRGLLEEKLMNIKEEHQHQQKGCPHRNPIQRPPTSKTKGVKLRTLAVSVTALK
AAYLELFVPPGGFVVSLASGVKLQTFKVCVTAHEGRVDPKSEQQQDLSQRVKEQSFHSVE
GDPRAQLASPSGSCTGAAGGAACQYRAMHPHSSALGWSMGLGAVEQGAVLIEEAPAAQEP
RGEIGNFSKVLGYKINVEKSQAFLYTNNRPTESQIMSELPFTIATKKIKFLGIQLTLDVK
DLFKENYKPLLKEIRGHKQVEKHSMFMDKKNIMKMAIMPKGIYRFNAIPIKLPFTFFTEL
EKTTLNFISNQKRACTAKTILSKRNKAGGITLLDFKLYYKATVTKTAWYWYGTKIDI

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_2|1254_bp
atggggagacacctctcagcagagcttgacagacatatcacacaggagagctctggctgg
gatctggcgggtgccactctgggacgaagcttccaggggaaggaacaggcagcaatcttt
gctgttctgcagcctccactggtgatacctaggcaaacagggtctggagtggacctccag
caaactccaacagacctgcagcagaggggcctgttagaagaaaaactaatgaacataaag
gaagagcatcaacatcaacaaaaaggatgtccacacagaaaccccatccaaaggccacca
acatcaaagaccaaaggagtgaagctgcggaccttggcggtgagtgttacagctcttaag
gcagcgtatctggagttgttcgttcctcccggtgggtttgtggtctcgctggcttcagga
gtgaagctgcagaccttcaaggtgtgtgttacagctcatgaaggcagggtggacccaaag
agtgagcagcagcaagatttatcgcaaagagtgaaagaacaaagcttccacagtgtggaa
ggggacccgagagcccagctggcttcacccagtggatcctgcactggggcagcaggtgga
gctgcctgccagtaccgcgccatgcacccacactcctcagcccttgggtggtcgatggga
ctgggcgccgtggagcagggggcggtgctcattgaggaggctccggcagcacaggagccc
aggggggagataggcaacttcagcaaagtcttaggatacaaaatcaatgtggaaaaatca
caagcattcttatacaccaataatagaccaacagagagccaaatcatgagtgaactccca
ttcacaattgctacaaagaaaataaaattcctaggaatccaacttacactggatgtgaag
gaccttttcaaggagaactacaaaccactgctcaaggaaataagaggacacaaacaagtg
gaaaaacattccatgttcatggataagaagaatatcatgaaaatggccataatgcccaaa
ggaatttatagattcaatgctatccccatcaagctaccattcactttcttcacggagtta
gaaaaaactactttaaatttcatatcgaaccaaaaaagagcatgtacagcaaagacaatc
ctaagcaaaaggaacaaagctggaggcatcacactacttgacttcaaattatactacaag
gctacagtaaccaaaacagcatggtactggtatggtaccaaaatagatatatag

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_3|73_aa
MAETGQCGAQAVASLGATSSFESFHVVLSLLVEIHPTADYLFWYHSIRQVIHVISSPFRT
THSQLLSLCLMSR

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_3|222_bp
atggctgaaacaggtcaatgtggagctcaggccgtggcttcattgggtgcaacctcaagc
tttgaaagcttccatgtggtgttgagcctacttgtggaaattcaccccacagcagattat
ctcttttggtatcacagcatccggcaggtgatccatgtaatcagtagccctttcaggaca
actcacagtcagctcctgtctctgtgccttatgtctagataa

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_4|158_aa
MGKKQSRKTGNSKKQSTCPPPKNRSSSPAMEQRWTENDFDELREEGFSRSNYELQEEIQT
KDKEVKNFEKNLDECITRITNTEKCLKELTELKAKARELREECRSLRSQCDQLEERVSAM
EDEVNEMKREGKFREKRIKRNEQSLQEIWDYVKNQIYV

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_4|477_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcacctgtcctcct
ccaaagaatcgcagttcctcaccagcaatggaacaaaggtggacggagaatgactttgat
gagttgagagaagaaggcttcagtcgatcaaactacgagctacaggaggaaatacaaacc
aaagacaaagaagttaaaaactttgaaaaaaatttagacgaatgtataactagaataacc
aatacagagaagtgcttaaaggagttgacggagctgaaagccaaggctcgagaactacgt
gaagaatgcagaagcctcaggagccaatgcgatcaactggaagaaagagtatcagcgatg
gaagatgaagtgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaaaga
aatgaacaaagcctgcaagaaatatgggactatgtgaaaaaccaaatctatgtctga

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_5|347_aa
MNIDAKILNKILANRIQQHIKNLIHHDQVGFIPGMQGWFNIRKSVNVTQHINRTKDKNHM
IISIDAEKAFDKIQQLFMIKTLNKLGIDGTYLKIIRAIYDKPAANIILNGQKLEAFPLKT
GTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMTVYLENPIVSA
QNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DMKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIMKMAILPKVIYRFNAIPIKLPMT
FFTELEKTTLKFIWNQKRACIAKSVLAKRTKLEASRYLTLNYTTRLQ

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_5|1044_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaaccttatccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaat
atacgcaaatcagtaaatgtaacccagcatataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacaactcttcatgataaaa
actctcaataaattaggtattgatgggacgtatctcaaaataataagagctatctatgac
aaacccgcagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtc
aaattgtccctgtttgcggacgacatgactgtatatctagaaaaccccattgtctcagcc
caaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagg
gacatgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagaggat
acaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcatgaaaatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcctgc
attgccaagtcagtcctagccaaaagaacaaagctggaggcatcacgctacctgacttta
aactatactacaaggttacagtaa

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_6|221_aa
MASEELQKDLEEVKVLLEKATRKTEKSKIETEIKNKLQQKSQKKAELLDNEKPAAVVAPI
TTGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSM
IVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKEKPSYDTETDP
SEGLMNVLKKIYEDGDDDMKQTINKAWVKSREKQAKGDTEF

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_6|666_bp
atggcttcagaagagctacagaaagatctagaagaggtaaaggtgttgctggaaaaggct
actaggaagactgaaaaatccaagattgagaccgaaatcaagaacaagttgcaacagaaa
tcgcagaagaaagcagaacttcttgataatgaaaaaccagctgctgtggttgctcccatt
acaacgggctatacggtgaaaatcagtaattatggatgggatcagtcagataagtttgtg
aaaatctacattaccttaactggagttcatcaagttcccactgagaatgtgcaggtgcat
ttcacagagaggtcatttgatcttttggtaaagaatttaaatgggaagagttactccatg
attgtgaacaatctcttgaaacccatctctgtggaaggcagttcaaaaaaagtcaagact
gatacagttcttatattgtgtagaaagaaagtggaaaacacaaggtgggattacctgacc
caggttgaaaaagagtgcaaagaaaaagagaagccctcctatgacactgaaacagatcct
agtgagggattgatgaatgttctaaagaaaatttatgaagatggagatgatgatatgaag
caaaccattaataaagcctgggtgaaatcaagagagaagcaagccaaaggagacacggaa
ttttga

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_7|151_aa
MTAVFIKRGNLDIDTNMRMPCEDEGRDWGDASISAYRIAASAYSQLFSLTATSTIKDISQ
IPTGHTASSSGSLIPMAPDGETPPSRGQQTPHKGELQLASGRYPFGTNLPEEGAGSNICC
SAASTGDTKANNVWSGPAANASRPAEERPDC

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_7|456_bp
atgactgctgtcttcataaaaagaggtaatttggacatagacactaacatgagaatgcca
tgtgaagatgaaggcagagattggggtgatgcttctatttctgcttatagaattgctgct
tctgcctactcccaactattctccctaactgctacttccactattaaagacattagtcag
attccaacaggacacactgcctcctcaagtgggtccctgatccccatggctcctgatggg
gagacacctcccagcaggggtcaacagacacctcataaaggagagctccagctggcatct
ggcaggtacccctttgggacaaatcttccagaggaaggagcaggcagcaatatttgttgt
tctgcggcctccactggtgataccaaggcaaacaacgtctggagtggacctgcagcaaat
gccagcagacctgcagaagagaggcctgactgttag

>gi568815596r:183507438_183708119|GENSCAN_predicted_peptide_8|122_aa
MTGWQKCEREEQKMHLGRSQGTILEPGIGVKHLRNLPGILLYCGQAGIQTVEEPIPMATT
TASTQGGLPGHHQCSLKAQVIFSQLVVNAARARTLLSGQWAPLWPRAGPDMLYKNLGLDS
GI

>gi568815596r:183507438_183708119|GENSCAN_predicted_CDS_8|369_bp
atgactggatggcagaaatgtgagagggaggaacagaagatgcatttgggaaggtcccaa
ggtactatattggagccagggatcggagtcaaacaccttagaaatctacctggcatccta
ttgtactgtggccaagctggcattcaaaccgtggaggagcctatccccatggccaccacc
actgccagcacacagggaggtctgccaggccaccaccaatgttcacttaaggcccaagtt
atcttcagtcagcttgtggtgaatgctgccagggctaggactctcctttcaggacagtgg
gctcccctctggcccagggcaggtccagatatgctgtacaagaacctaggcctggactca
gggatctga