GENSCAN 1.0	Date run:  5-Nov-116	Time: 00:26:11

Sequence gi568815596r:180772870_180973414 : 200545 bp : 35.48% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +  30813  30852   40                              -2.45
 1.01 Init +  48835  48884   50  0  2   67   93    28 0.152   1.67
 1.02 Term +  54372  54555  184  0  1   26   42   205 0.967   5.73
 1.03 PlyA +  54721  54726    6                               1.05

 2.04 PlyA -  55186  55181    6                               1.05
 2.03 Term -  56907  56830   78  0  0   84   40    74 0.505  -1.02
 2.02 Intr -  57188  57068  121  1  1   20   66   104 0.470   0.98
 2.01 Init -  64542  61451 3092  0  2   44   53  1046 0.635  88.17
 2.00 Prom -  64800  64761   40                              -5.25

 3.03 PlyA -  64882  64877    6                              -4.04
 3.02 Term -  65452  64900  553  0  1  -48   43   347 0.677   9.40
 3.01 Init -  65916  65531  386  0  2   88   44   342 0.915  26.16
 3.00 Prom -  69395  69356   40                              -5.35

 4.04 PlyA -  69631  69626    6                               1.05
 4.03 Term -  85668  85487  182  1  2   -1   44   201 0.023   3.59
 4.02 Intr - 100709 100522  188  1  2   14   85   214 0.092  12.11
 4.01 Init - 121691 121591  101  2  2   95   83    27 0.451   2.68
 4.00 Prom - 121993 121954   40                              -2.45

 5.00 Prom + 141304 141343   40                              -1.75
 5.01 Sngl + 191885 192421  537  1  0   20   44   377 0.401  22.33
 5.02 PlyA + 192833 192838    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:180772870_180973414|GENSCAN_predicted_peptide_1|77_aa
MMTNALEHNYKELQMGSNLDAGDTRSTFQEYGHDTRNHKHDENGMTGEEVPDASLVNEDP
ASGDADTTSLKKLNICR

>gi568815596r:180772870_180973414|GENSCAN_predicted_CDS_1|234_bp
atgatgaccaatgctcttgaacataattataaggaattacaaatgggaagcaatctagat
gctggggacacaaggtccaccttccaggaatatggccatgacaccagaaatcacaaacat
gatgagaatggaatgactggggaagaagtgccagatgcttcacttgtaaatgaagaccca
gcctctggggatgcagataccacctccctgaagaagctgaatatctgcagataa

>gi568815596r:180772870_180973414|GENSCAN_predicted_peptide_2|1096_aa
MVKGSIQQEELTILNIYAPNTGAPRFIKQVLSDLQRDLDSHTLIMGDFNTPLSTLDRSTR
QKVNKDTQELNSALHQADLIDIYRTLHPKSTEYTFFSAPHHTYSKIDHIVGSKALLSKCK
RTEIITNYLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFFETNE
NKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLTSQLKELEKQEQTHSKASRRQ
EITKIRAELKEIETQKTLQKINESRSWFFERINKIDRPLARLIKKKREKNQIDTIKNDKG
DITTDPTEIQTTIREYYKHLYANKLENLEEMDTFLDTYTLPRLNQEEVESLNRPITGSEI
VAIINSLPTKKSPGPDGFTAEFYQRYKEELVPFLLKLFQSIEKEGILPNSFYEASIILIP
KPGRDTTKKENFRPISLMNIDAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNICK
SINVIQHINRAKDKNHMIISIDAEKAFDKIQQPFMLKTLNKLGIDGTYFKIIRAVYDKPT
ANIILNGQKLEVFPLKTGTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLS
LFADDMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELP
FTIASKRIKYLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAIL
PKVIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAPITKSILSQKNKAGGITLPDFKLY
YKATVTKTAWYWYQNRDIDQWNRTEPSEIMLHIYNYLIFDKPEKNKQWGKDSLFNKWCWE
NWLAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGVGKDFMSKT
PKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTTWEKIFATYSSDKGLISRIYNELK
QIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSSSLAIREMQIKTTMRYHLTPVR
MAIIKKSGNNRTTLLKIVHSKVLIKLATVPASNINVILFGEEPFEGVAGTIIVATQEGAR
EPSASPKSLVSESEFA

>gi568815596r:180772870_180973414|GENSCAN_predicted_CDS_2|3291_bp
atggtaaagggatcaattcaacaagaggagctaactatcctaaatatttatgcacccaat
acaggagcacccagattcataaagcaagtcctgagtgacctacaaagagacttagactcc
cacacattaataatgggagactttaacaccccactgtcaacattagacagatcaacgaga
cagaaagtcaacaaggatacccaggaattgaactcagctctgcaccaagcagacctaata
gacatctacagaactctccaccccaaatcaacagaatatacatttttttcagcaccacac
cacacctattccaaaattgaccacatagttggaagtaaagctctcctcagcaaatgtaaa
agaacagaaattataacaaactatctctcagaccacagtgcaatcaaactagaactcagg
attaagaatctcactcaaaaccgctcaactacatggaaactgaacaacctgctcctgaat
gactactgggtacataacgaaatgaaggcagaaataaagatgttctttgaaaccaacgag
aacaaagacaccacataccagaatctctgggacgcattcaaagcagtgtgtagagggaaa
tttatagcactaaatgcctacaagagaaagcaggaaagatccaaaattgacaccctaaca
tcacaattaaaagaactagaaaagcaagagcaaacacattcaaaagctagcagaaggcaa
gaaataactaaaatcagagcagaactgaaggaaatagagacacaaaaaacccttcaaaaa
atcaatgaatccaggagctggttttttgaaaggatcaacaaaattgatagaccgctagca
agactaataaagaaaaaaagagagaagaatcaaatagacacaataaaaaatgataaaggg
gatatcaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacacctc
tacgcaaataaactagaaaatctagaagaaatggatacattccttgacacatacactctc
ccaagactaaaccaggaagaagttgaatctctgaatagaccaataacaggctctgaaatt
gtggcaataatcaatagtttaccaaccaaaaagagtccaggaccagatggattcacagcc
gaattctaccagaggtacaaggaggaactggtaccattccttctgaaactattccaatca
atagaaaaagagggaatcctccctaactcattttatgaggccagcatcattctgatacca
aagccgggcagagacacaaccaaaaaagagaattttagaccaatatccttgatgaacatt
gatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatcaaaaagctt
atccaccatgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgcaaa
tcaataaatgtaatccagcatataaacagagccaaagacaaaaaccacatgattatctca
atagatgcagaaaaagcctttgacaaaattcaacaacccttcatgctaaaaactctcaat
aaattaggtattgatgggacgtatttcaaaataataagagctgtctatgacaaacccaca
gccaatatcatactgaatgggcaaaaactggaagtattccctttgaaaactggcacaaga
cagggatgccctctctcaccactcctattcaacatagtgttggaagttctggccagggca
atcaggcaggagaaggaaataaagggtattcaattaggaaaagaggaagtcaaattgtcc
ctgtttgcagacgacatgattgtttatctagaaaaccccatcgtctcagcccaaaatctc
cttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatca
caagcattcttatacaccaacaacagacaaacagagagccaaatcatgagtgaactccca
ttcacaattgcttcaaagagaataaaatacctaggaatccaacttacaagggatgtgaag
gacctcttcaaggagaactacaaaccactgctcaaggaaataaaagaggacacaaacaaa
tggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaaatggccatactg
cccaaggtaatttacagattcaatgccatccccatcaagctaccaatgactttcttcaca
gaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccccatcaccaag
tcaatcctaagccaaaagaacaaagctggaggcatcacactacctgacttcaaactatac
tacaaggctacagtaaccaaaacagcatggtactggtaccaaaacagagatatagatcaa
tggaacagaacagagccctcagaaataatgctgcatatctacaactatctgatctttgac
aaacctgagaaaaacaagcaatggggaaaggattccctatttaataaatggtgctgggaa
aactggctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaa
atcaattcaagatggattaaagatttaaacgttagacctaaaaccataaaaaccctagaa
gaaaacctaggcattaccattcaggacataggcgtgggcaaggacttcatgtccaaaaca
ccaaaagcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagc
ttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctacaacgtgggagaaa
attttcgcaacctactcatctgacaaagggctaatatccagaatctacaatgaactcaaa
caaatttacaagaaaaaaacaaacaaccccatcaaaaagtgggcgaaggacatgaacaga
cacttctcaaaagaagacatttatgcagccaaaaaacacatgaagaaatgctcatcatca
ctggccatcagagaaatgcaaatcaaaaccactatgagatatcatctcacaccagttaga
atggcaatcattaaaaagtcaggaaacaacagaactactcttttgaagattgtgcactca
aaagtattaattaaattggcaactgtgcctgccagcaacattaatgtgatactctttggg
gaggagccatttgaaggtgttgctggaactataatagtagccactcaagagggtgccagg
gaaccttctgcttctcctaaaagcttggtttcagaaagtgaatttgcttga

>gi568815596r:180772870_180973414|GENSCAN_predicted_peptide_3|312_aa
MGKKQNRKTGNSKTQSASPPPKELSSSPATEQSWMENDFDELREEGFRRSNYSELREDIQ
TKGKEVENFEKNLEECITRITNTEKCLKELMELKTKAQELCEECRSLRSRCDQLEERVSA
MEDEMNEMKPNLRLIGVPESDVENGTKLENTLQDIIQENFPNLARQANVQIQEIQRTPQR
YSSRRATPRHIIVRFTKVEMKEKMLRAAREKGRVTLKGKPIRLTADLSAETLQARREWGP
IFNILKEKNFQPRISYPAKLSFISEGEIKYFIDKQMLRDFVTTRPALKELLKEALNMERN
NRYQPLQNHAKM

>gi568815596r:180772870_180973414|GENSCAN_predicted_CDS_3|939_bp
atggggaaaaaacagaacagaaaaactggaaactctaaaacgcagagcgcctctcctcct
ccaaaggaactcagctcctcaccagcaacagaacaaagctggatggagaatgattttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggacattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttagaagaatgtataactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctcaagaacta
tgtgaagaatgcagaagcctcaggagccgatgcgatcaactggaagaaagggtatcagca
atggaagatgaaatgaatgaaatgaaaccaaatctacgtctgattggtgtacctgaaagt
gatgtggagaatggaaccaagttggaaaacactctgcaggatattatccaggagaacttc
cccaatctagcaaggcaggccaacgttcagattcaggaaatacagagaacgccacaaaga
tactcctcgagaagagcaactccaagacacataattgtcagattcaccaaagttgaaatg
aaggaaaaaatgttaagggcagccagagagaaaggtcgggttaccctcaaaggaaagccc
atcagactaacagcggatctctcggcagaaaccctacaagccagaagagagtgggggcca
atattcaacattcttaaagaaaagaattttcaacccagaatttcatatccagccaaacta
agcttcataagtgaaggagaaataaaatactttatagacaagcaaatgctgagagatttt
gtcaccaccaggcctgccctaaaagagctcctgaaggaagcgctaaacatggaaaggaac
aaccggtaccagccgctgcaaaatcatgccaaaatgtaa

>gi568815596r:180772870_180973414|GENSCAN_predicted_peptide_4|156_aa
MGLFFHLVLPDTLKGFDSSSFISKYFKEGPPEVRVSDERRSSPRVVGVSPIASPPSPLHG
ALGLPQGSRRCSSAAQPLPPPPPLLSRRNDDRVHLAGRGWNSLEGSEEEGKMWESLELPG
DLESSEDRKMWESLELPRDLLNGCDHNTHNDTDNEV

>gi568815596r:180772870_180973414|GENSCAN_predicted_CDS_4|471_bp
atggggcttttttttcaccttgttcttccagacactctgaagggttttgattcttcaagt
tttatttcaaagtacttcaaagagggacctcctgaagtgagagtctctgatgagagacgt
tcttcgccgagagtcgtaggggtttcgcccatagccagccctccgtcacctcttcacggc
gccctgggactgccccaaggctcccgccgctgctccagcgcggcgcagccactgccgccg
ccgccgcctctccttagtcgccgcaatgacgaccgcgtccacctcgcagggagaggttgg
aacagtttggagggttcagaagaagaagggaaaatgtgggaaagtttggaacttcctgga
gacttggagagctcagaagacaggaagatgtgggaaagtttggaacttcctagagactta
ctgaatggctgtgaccacaacactcataatgatacggacaatgaagtctag

>gi568815596r:180772870_180973414|GENSCAN_predicted_peptide_5|178_aa
MICTNKWVHRSQEVRFENLRLHFRSCMETPRIPRQKFAAGVGPLWRTSARAVQKGNVGSE
PPHRVPTGALPSGAVRRGPLSSRHQNGRSTDSLHCAAGKATGIQCQPMKAAGSGAVPCKA
TGEELPKTMGIHLLHQLDLDVRHGVKGDHFGALRFHRRAQFRTCMGPTAPLLLPISPI

>gi568815596r:180772870_180973414|GENSCAN_predicted_CDS_5|537_bp
atgatatgcacaaacaaatgggtgcacagaagtcaagaagtgaggtttgaaaacctccgc
ctgcatttcagaagttgtatggaaacacctagaatcccccggcagaaatttgctgcaggg
gtggggcccttatggagaacctctgctagggcagtgcagaaaggaaatgtggggtcggag
cccccacacagagttcctactggggcactgcctagtggagctgtgagaagagggccactg
tcctccagacaccagaatggtagatccactgacagcttgcactgtgcagctggaaaagcc
acaggcattcaatgccagcccatgaaagcagctgggagtggggctgtaccctgcaaagcc
acaggggaggagctgccaaagaccatgggaatccacctcttgcatcagcttgacctggat
gtgagacatggagtcaaaggagatcattttggagctttaagatttcaccgccgtgctcaa
tttcggacttgcatggggcctacagctcctttgcttttgccaatttctcccatttga