GENSCAN 1.0	Date run:  7-Nov-116	Time: 02:22:50

Sequence gi568815596r:162044026_162249178 : 205153 bp : 38.14% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   1587   1507   81  0  0  110   93    53 0.024   6.92
 1.03 Intr -  13417  13337   81  1  0   81   75    67 0.167   3.62
 1.02 Intr -  29531  29330  202  1  1    5   71   284 0.062  16.77
 1.01 Init -  29956  29805  152  1  2   85  -32   143 0.065   1.83
 1.00 Prom -  32623  32584   40                              -8.35

 2.02 PlyA -  33295  33290    6                               1.05
 2.01 Sngl -  33640  33386  255  1  0   87   42   210 0.775   9.19
 2.00 Prom -  33912  33873   40                              -7.75

 3.00 Prom +  34037  34076   40                              -5.85
 3.01 Init +  49293  49427  135  2  0   73   89   121 0.714  10.89
 3.02 Term +  60150  60425  276  2  0  107   41   119 0.044   3.58
 3.03 PlyA +  61731  61736    6                               1.05

 4.00 Prom +  66282  66321   40                              -3.25
 4.01 Init +  74523  74712  190  2  1   60   66   136 0.459   7.82
 4.02 Intr +  76208  76254   47  0  2  102   94     8 0.082   0.01
 4.03 Intr +  81893  81984   92  1  2   49   90    56 0.039  -0.23
 4.04 Intr +  82828  82966  139  1  1   70   80    77 0.510   4.65
 4.05 Term +  96916  97071  156  0  0   14   47   113 0.002  -3.25
 4.06 PlyA +  98598  98603    6                               1.05

 5.21 PlyA -  98875  98870    6                               1.05
 5.20 Term - 100145  99998  148  1  1   29   42   164 0.292   2.29
 5.19 Intr - 101652 101515  138  2  0   88   89   169 0.994  15.66
 5.18 Intr - 103489 103328  162  0  0   64  110   106 0.985   8.57
 5.17 Intr - 105162 105062  101  0  2   99   67    58 0.472   2.79
 5.16 Intr - 125696 125529  168  2  0   63   63   106 0.457   4.82
 5.15 Intr - 128859 128786   74  1  2  121   43    61 0.899   3.11
 5.14 Intr - 129196 129124   73  1  1  112   77    55 0.969   4.86
 5.13 Intr - 140589 140559   31  2  1   84  102    20 0.059   0.21
 5.12 Intr - 144338 144144  195  1  0   90   99   189 0.387  17.81
 5.11 Intr - 145147 145078   70  2  1   67   31    34 0.155  -7.08
 5.10 Intr - 145729 145631   99  2  0   42   46   121 0.140   2.46
 5.09 Intr - 150155 149993  163  2  1   96    9    93 0.127   0.83
 5.08 Intr - 150723 150676   48  0  0  116   73    34 0.732   2.66
 5.07 Intr - 154298 154154  145  1  1   50   97    74 0.521   3.86
 5.06 Intr - 154856 154728  129  1  0   92   65   125 0.538   9.49
 5.05 Intr - 156594 156541   54  2  0   74   91    58 0.386   1.88
 5.04 Intr - 158917 158847   71  1  2   72   93     3 0.335  -3.74
 5.03 Intr - 170048 169913  136  1  1   93   97    51 0.843   6.15
 5.02 Intr - 171976 171873  104  1  2   84   63    85 0.957   3.65
 5.01 Init - 174110 173961  150  2  0   52   95   139 0.907  11.09
 5.00 Prom - 176988 176949   40                              -6.85

 6.00 Prom + 178381 178420   40                              -5.35
 6.01 Init + 183637 183694   58  0  1   67   46    85 0.735   3.72
 6.02 Intr + 184506 184538   33  1  0   95   93    25 0.495   0.98
 6.03 Intr + 191235 191356  122  1  2  105   88    91 0.345  10.09
 6.04 Term + 196037 196084   48  1  0   56   42    67 0.109  -4.77
 6.05 PlyA + 198469 198474    6                               1.05

 7.02 PlyA - 199613 199608    6                               1.05
 7.01 Term - 204793 204653  141  1  0   74   33   157 0.834   5.75

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 117343 117121  223  1  1   71   75   121 0.888   7.86


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_1|172_aa
MKVSAAPRTSPGRAVGTSSPNSPNGPKAGETGPGTPLRRKPQGHPLTGEGTPDPPTETGA
TRFPLIGLDLLGLQTPWKVLLGLLGAAALVTIITVPVVLLNKGSKFETFEKDRTVGAQNL
ARILQMRLLGNIAVEPFPRITEQGRDEFGHSINDYSISPDGQFILLEYNYVK

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_1|516_bp
atgaaggtgagtgccgcgccacgtacgtccccggggcgagctgtggggacctcttcgcca
aactccccaaatggcccaaaagctggcgaaaccggaccagggactccccttaggcggaag
ccccaaggccaccctctgacaggtgaagggacccccgaccctcctacggaaactggggcc
acacgcttccctctaattggacttgatctgctcggcttgcagacaccgtggaaggttctt
ctgggactgctgggtgctgctgcgcttgtcaccatcatcaccgtgcccgtggttctgctg
aacaaaggcagtaagtttgaaacatttgaaaaagataggacagttggagctcagaaccta
gcaagaatcctgcagatgaggcttcttggaaatatagctgtagagcccttccccagaatt
actgagcaaggaagggatgagtttggacattctatcaatgattattcaatatctcctgat
gggcagtttattctcttagaatacaactacgtgaag

>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_2|84_aa
MVVLGWIPPALPLRRVWVQWTRSCSIFIEVETQKQRFQQLVHQMTELCWEKCMDKPGPKL
DSRAEACFVNCIERFIDTSQFILN

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_2|255_bp
atggttgtcctgggatggattcctcctgctcttcctctgcggcgggtttgggtgcagtgg
acccgcagttgcagcattttcattgaggtagagactcaaaagcagcgcttccagcagctg
gtgcaccagatgactgaactttgttgggagaagtgcatggacaagcctgggccaaagttg
gacagtcgggctgaggcctgttttgtgaactgcattgagcgcttcattgatacaagccag
ttcatcttgaattga

>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_3|136_aa
MTQVLKNMIHATKNTLQLSLKRKRLGVNIPVAQMAVHEWALVRRMVLTPALWTHFPDKLP
TCKPLFQGLLSEIQSTLKSMELLVGIHIIGAQGTVLQLKASSQGKERAPGKLGWGSCDLK
APVSVFTCIAYLSVSG

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_3|411_bp
atgactcaagtgttgaaaaatatgatccacgcaactaaaaatacattgcaactgagtttg
aagaggaaaagactgggtgtcaacattccagtggcccaaatggctgtgcatgaatgggct
ttggttcgaaggatggtcctaacccctgcactctggactcatttcccagataaactaccc
acatgcaagcctttatttcagggtcttctttctgagatccagagtacgctaaagtccatg
gagctgctggtgggaattcatattataggtgcccaaggaacagtgctccaactcaaggcc
agcagtcaggggaaagagagggcaccaggaaagctaggctggggctcctgtgaccttaag
gccccagtctctgtgttcacctgtattgcatatctgtctgtttctggctga

>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_4|207_aa
MPVKVPMKERLICKHLPGLESPKPVQEGHFLALYHVSLLALALAQKLAGKLRGGHQKGGG
KALAVTQRKPKTATYSGSQSEMHMNRYKDYLHFVDMGGPDTHKEINKCLRLSNAPPPQRC
PCPGPQDCEYVTLPGKRDFADMSKDLEMGRVSRIIQVRAEDGAATLQSGVTMGGKPFVSD
GRTERKRPRAIPDMFTFDILSSGLLIL

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_4|624_bp
atgcccgtgaaagtgcccatgaaagaaagactcatctgcaaacatttgccaggcctggaa
agcccgaagccagtacaagaaggacatttcctggccctttaccatgtctctcttctagct
ctggccttagcccagaaactggctggcaagctgcggggagggcatcagaagggaggaggg
aaagcactagctgtcacacagaggaaacccaagacagcaacatattctggaagccagagc
gaaatgcacatgaatcgatataaagattatctgcattttgtggacatgggtggtccagac
acccacaaggagataaataaatgtttgagactgagtaatgctcccccaccccaaagatgt
ccgtgtcctggtccccaggactgtgaatatgttaccttgcctggcaaaagggactttgca
gatatgagtaaggaccttgagatggggagagtatccagaattattcaggtaagagctgaa
gatggagcagccacacttcaatctggagttaccatgggaggaaagccatttgttagtgat
ggcagaacagaaagaaaaagaccacgagctatccctgacatgtttacctttgatattctt
tcctctggacttctgattttgtga

>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_5|752_aa
MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI
FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFR
EDWQTWDCPKENAIQITSGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPP
SKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGREISNSHIQGNEQRLGNPRCPRRRSI
IPQTVVSMGIEDEPLSFLNLENIAQASPFPPFMMDALIKLHHIVATYERPEIWRLFPFST
AIKTVLLYPVFVILVQNSSHLKDDQFCSQQSCPKIKILEENKELENALKNIQLPKEEIKK
LEVDEITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIA
LVDGRGTAFQGDKLLYAVYRKLGVYEVEDQITAVRLLSVLQNQCRNSTVMARAEYFRNVD
YLLIHGTADDNVHFQNSAQIAKALVNAQVDFQAMLSETIAPNSGHIAPPHTSGRDVLWWS
GILDNTFPDSGLATAPLFFLHAMAVALRTRTAEMKSIYFVAGLFVMLVQGSWQRSLQDTE
EKSRSFSASQADPLSDPDQMNEDKRHSQGTFTSDYSKYLDSRRAQDFVQWLMNTKRNRNN
IAKRHDEFERHAEGTFTSDVSSYLEGQAAKEFIAWLVKGRGRRDFPEEVAIVEELGRRHA
DGSFSDEMNTILDNLAARDFINWLIQTKITDR

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_5|2259_bp
atgcttgctacaaaatatgctctctggtggtctcctaatggaaaatttttggcatatgcg
gaatttaatgatacggatataccagttattgcctattcctattatggcgatgaacaatat
cctagaacaataaatattccatacccaaaggctggagctaagaatcccgttgttcggata
tttattatcgataccacttaccctgcgtatgtaggtccccaggaagtgcctgttccagca
atgatagcctcaagtgattattatttcagttggctcacgtgggttactgatgaacgagta
tgtttgcagtggctaaaaagagtccagaatgtttcggtcctgtctatatgtgacttcagg
gaagactggcagacatgggattgtccaaaggaaaatgctattcaaattacaagtggcaag
tgggaggccataaatatattcagagtaacacaggattcactgttttattctagcaatgaa
tttgaagaataccctggaagaagaaacatctacagaattagcattggaagctatcctcca
agcaagaagtgtgttacttgccatctaaggaaagaaaggtgccaatattacacagcaagt
ttcagcgactacgccaagtactatgcacttgtctgctacggtagagaaatatcaaactct
cacatccaggggaatgaacaacggcttggaaacccgagatgcccacgtcggaggtcaatc
attcctcaaactgtagtttcaatggggatagaagatgaacctttgtcctttctaaatttg
gaaaacatcgcccaggcatccccatttccacccttcatgatggacgcactgatcaagcta
catcacattgttgccacgtatgaacgccctgaaatttggaggctctttccattttcaact
gctatcaagacagtcctcctctatcctgtatttgtgatattggttcaaaatagttcacat
ctcaaagacgaccagttttgctcgcagcagagttgtccaaaaattaaaatcctggaagaa
aacaaggaattggaaaatgctttgaaaaatatccagctgcctaaagaggaaattaagaaa
cttgaagtagatgaaattactttatggtacaagatgattcttcctcctcaatttgacaga
tcaaagaagtatcccttgctaattcaagtgtatggtggtccctgcagtcagagtgtaagg
tctgtatttgctgttaattggatatcttatcttgcaagtaaggaagggatggtcattgcc
ttggtggatggtcgaggaacagctttccaaggtgacaaactcctctatgcagtgtatcga
aagctgggtgtttatgaagttgaagaccagattacagctgtcagactcctcagtgtcctt
cagaatcagtgtcggaattcaactgtgatggcaagagcagaatatttcagaaatgtagac
tatcttctcatccacggaacagcagatgataatgtgcactttcaaaactcagcacagatt
gctaaagctctggttaatgcacaagtggatttccaggcaatgctttctgaaaccattgcc
cctaactcaggccacatagctccacctcacacatcaggaagggatgttctgtggtggtca
ggaattctggacaacaccttcccagattcaggactggccacagcccctcttttcttcctc
catgcaatggctgttgccctgaggaccagaacagcagaaatgaaaagcatttactttgtg
gctggattatttgtaatgctggtacaaggcagctggcaacgttcccttcaagacacagag
gagaaatccagatcattctcagcttcccaggcagacccactcagtgatcctgatcagatg
aacgaggacaagcgccattcacagggcacattcaccagtgactacagcaagtatctggac
tccaggcgtgcccaagattttgtgcagtggttgatgaataccaagaggaacaggaataac
attgccaaacgtcacgatgaatttgagagacatgctgaagggacctttaccagtgatgta
agttcttatttggaaggccaagctgccaaggaattcattgcttggctggtgaaaggccga
ggaaggcgagatttcccagaagaggtcgccattgttgaagaacttggccgcagacatgct
gatggttctttctctgatgagatgaacaccattcttgataatcttgccgccagggacttt
ataaactggttgattcagaccaaaatcactgacaggtga

>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_6|86_aa
MTLPVKTTDDDLVGLQTPAATYSMAVRIVAVPGPMDGPRAEECQRMARDWRAAPPAAPVR
DPLGEASWAPETKRGDACEEEPQKKK

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_6|261_bp
atgactcttccagtaaagaccacagatgatgatctggttggactacagacaccggctgca
acttattccatggctgtaagaatagtggctgtgcccggtcccatggatggcccaagggct
gaggagtgccagcgcatggcgcgggactggcgggcagctccacctgcggctccggtgcga
gatccactgggtgaggccagctgggctcctgagacgaagaggggtgatgcttgtgaagaa
gaacctcaaaagaaaaagtga

>gi568815596r:162044026_162249178|GENSCAN_predicted_peptide_7|46_aa
IKNEVRLERSRYTVGGFKDKGQKAIKLEDWIDFDALTPIHAPRINA

>gi568815596r:162044026_162249178|GENSCAN_predicted_CDS_7|141_bp
attaagaatgaggtgagactggagagatcccggtatacagttggtgggtttaaggataaa
ggtcagaaagccattaaactggaggactggattgactttgatgcactgactcccatacat
gctcctaggataaatgcttag