GENSCAN 1.0	Date run:  7-Nov-116	Time: 18:01:10

Sequence gi568815596f:68545822_68755573 : 209752 bp : 39.81% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   9705   9744   40                              -3.85
 1.01 Init +  10119  10293  175  2  1   71   80   116 0.715   8.66
 1.02 Intr +  31999  32182  184  2  1   90   10   343 0.041  24.62
 1.03 Intr +  43399  43474   76  1  1   60   27    81 0.011  -2.20
 1.04 Intr +  45466  45744  279  0  0   23   53   175 0.035   4.25
 1.05 Intr +  49568  49604   37  1  1   56   80    39 0.057  -3.18
 1.06 Intr +  51124  51177   54  2  0  116   74    62 0.119   5.63
 1.07 Intr +  53276  53722  447  0  0   67   86   195 0.172   9.59
 1.08 Term +  53778  54268  491  1  2   75   45   149 0.990   3.13
 1.09 PlyA +  55806  55811    6                               1.05

 2.03 PlyA -  58776  58771    6                               1.05
 2.02 Term -  60686  60623   64  1  1  140   38    30 0.713  -0.42
 2.01 Init -  61412  61267  146  2  2   73   68    88 0.780   4.94
 2.00 Prom -  68313  68274   40                              -3.65

 3.03 PlyA -  69077  69072    6                               1.05
 3.02 Term -  70121  69219  903  2  0  -16   41   337 0.521   9.93
 3.01 Init -  70590  70411  180  0  0   70   41   181 0.521  10.83
 3.00 Prom -  71540  71501   40                              -6.15

 4.02 PlyA -  71709  71704    6                               1.05
 4.01 Sngl -  72953  72624  330  2  0   88   44   285 0.988  19.87
 4.00 Prom -  76274  76235   40                              -7.05

 5.00 Prom +  77332  77371   40                              -6.85
 5.01 Init +  81289  81513  225  0  0   49   20   189 0.224   6.72
 5.02 Intr +  89512  89704  193  0  1   82   88    38 0.045   1.34
 5.03 Intr +  89947  90102  156  2  0   42   76    93 0.046   2.56
 5.04 Intr +  97262  97353   92  0  2  104   47    83 0.027   4.59
 5.05 Term +  97427  97987  561  1  0   -4   48   234 0.026   3.58
 5.06 PlyA +  98325  98330    6                               1.05

 6.00 Prom +  99509  99548   40                              -9.35
 6.01 Init + 100013 100485  473  1  2  110  109   670 0.788  66.34
 6.02 Intr + 109059 109675  617  0  2  107  115   717 0.459  67.36
 6.03 Intr + 110542 110645  104  2  2   68   74   104 0.510   5.97
 6.04 Intr + 110815 110861   47  0  2   86   91    63 0.450   2.69
 6.05 Term + 121926 122049  124  0  1   63   41    69 0.025  -3.42
 6.06 PlyA + 122243 122248    6                               1.05

 7.00 Prom + 126012 126051   40                              -4.25
 7.01 Init + 134066 134274  209  1  2   68  116   154 0.217  12.54
 7.02 Intr + 146851 146932   82  1  1   90   77    45 0.035   2.32
 7.03 Intr + 162956 163136  181  1  1   75   55   135 0.003   7.42
 7.04 Intr + 163875 163927   53  1  2   52   89     6 0.013  -5.19
 7.05 Intr + 164731 164877  147  0  0   83  109    32 0.009   4.31
 7.06 Term + 175128 175262  135  2  0   52   38   129 0.001   1.34
 7.07 PlyA + 175300 175305    6                               1.05

 8.04 PlyA - 175452 175447    6                               1.05
 8.03 Term - 177793 177558  236  2  2   35   49   205 0.274   6.80
 8.02 Intr - 187011 186896  116  2  2   83   42   107 0.051   4.77
 8.01 Init - 194706 194591  116  0  2   69  110    52 0.700   5.23

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  31999  32201  203  2  2   90   39   339 0.953  25.77


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_1|580_aa
MEPTQMRINKRVDKQCKESMMEYYSTVRRNELMALTVTWMRLETIILSEVSQEWKTKHVR
NVLDEDNDNVGQPNEYDLNDSFLDDEEEDYEPTDEDSDWEPGKEDEEKEDVEELLKEAKR
RNRAEDKVGGNFAEEKPQAELSEHGHTKETENAVNFSLYVTGNEYMRPPDSASEPKSDLI
LNGGDVEKRVQPGPTEGQITDNFHQSSPKEGADSTLAKNVNLNLIKPLNLTPRIHVKMTG
WCSSKELPDLEHNIVNGENTLSIDIEVPMLEVLARAIRQEKEIKGIQLGKEEVKFSLFAD
DMILYLENPIVSTQNLLKLISNFSKVSGYKINVQESQAFLYTNNRKTESQIMSELPFTIA
SKRIKYLGIQLTRDVKDLFKENYKPLHNKIKGHKQMEEHSMLMDRKNQYRENGHTAQELE
KTTLKFIWNQQRACIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYSYQNIDIDQWNR
TEPSEIIPHIYNYLIFDKSDKNKKWEKDSLFNKWCWEKLDPFLTPYTKINSRWIKDLNDR
PKTIKTLEENLGNTFQDIGMGKNFMSKTPKAMAMKAKIDK

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_1|1743_bp
atggaaccaacccaaatgcgcatcaataaacgagtggataaacagtgcaaagaaagtatg
atggaatactactcaactgtaagaaggaatgaattaatggcactcacagtgacctggatg
agattggagactattattctaagtgaagtatctcaggaatggaaaaccaaacatgtgaga
aatgttttagatgaagataatgataatgttgggcaacccaatgagtatgacctgaacgac
agctttctagatgatgaggaagaagactatgagccaacagatgaagattctgactgggaa
ccaggaaaggaagatgaagagaaggaagatgtggaagagcttttgaaagaagcaaaaagg
agaaacagggctgaagacaaggttggaggtaactttgcagaggagaagccacaggcagaa
ctctcagaacatgggcataccaaggagacagagaatgctgtgaacttcagtttatatgta
acaggcaatgaatacatgaggccaccagactcagcttctgagcccaagtcagacctgata
ctcaatggaggtgacgtggaaaagagagtgcagccaggtcccaccgaggggcagatcaca
gataacttccatcagagttcgcccaaagaaggagctgactccacccttgccaaaaatgtt
aacctgaatctaattaagcctttaaacctaactcccaggatacatgtaaaaatgacaggg
tggtgtagcagcaaagagctcccagacctggaacataatatcgttaatggagaaaatact
ctcagtatagatattgaagtacccatgttggaagttctggccagggcaatcaggcaggag
aaagaaataaagggtattcaattaggaaaagaggaagtcaaattttccctgtttgcagat
gacatgattctatatctagaaaaccccattgtctcaacccaaaatctccttaagctgata
agcaacttcagcaaagtctcaggatacaagatcaatgtgcaagaatcacaagcattttta
tatacaaataacagaaaaacagagagccaaataatgagtgaactcccattcacaattgct
tcaaagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaag
gagaactacaaaccactgcacaacaaaataaaaggacacaaacaaatggaagaacattcc
atgctcatggataggaagaatcaatatcgtgaaaatggccatactgcccaagaattggaa
aaaacaactttaaagttcatatggaaccaacaaagagcctgcattgccaagtcaatccta
agccaaaagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggct
acagtaaccaaaacagcatggtactcttaccaaaacatagatatagaccaatggaacaga
acagagccctcagaaataataccacacatctacaactatctgatctttgacaaatctgac
aaaaacaagaaatgggaaaaggattccctgtttaacaaatggtgctgggaaaaactggat
cccttccttacaccttatacaaaaataaattcaagatggattaaagacttaaatgataga
cctaaaaccataaaaaccctagaagaaaacctaggcaatacctttcaggacataggcatg
ggcaagaacttcatgtctaaaacaccaaaagcaatggcaatgaaagccaaaattgacaaa
tag

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_2|69_aa
MDPNHGPGSPSTSHAEKLLEHQGFTCRCLTDQCFLTELLSTLNTTDPNRTWCLVLSTLHK
CRSKFYAVI

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_2|210_bp
atggatcccaaccatggaccaggttcccccagtacaagccatgctgagaaactgctggag
caccagggttttacctgtagatgcttaacggaccaatgctttctgactgaactcctctct
accctgaatacaacagaccctaataggacctggtgtttggtcttatcaacgctacacaaa
tgtaggtccaaattctatgctgtcatttag

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_3|360_aa
MDKFLDTYTLPRLNQEEVASLNRPITGAEIVAIINSLPTKKSPGPDGFTAKFYQRYKEEL
HINRITDKNHMIISIDAEKAFDKIQQRFMLKTLNKLGIDGTYLKIVRAIYDKPTANIILN
GQKLEAFPLKTGTRWRCPLSPLLFNIVLEVLARPIRQEKEIKGIQLGKEEVKLSLFADDM
TVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQALLYTNNKQTESQIMSELPFTIASK
RIKCLGIQLTRDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWVGRINLMKMAILPKEIYR
FNATPIKLPMTFFTELEKTTSKFIWNQKRACITKSILSQKNKAGGITLPDFKLYYKATVT

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_3|1083_bp
atggataaattcctcgacacatacactctcccaagactaaaccaggaagaagttgcatct
ctgaatagaccaataacaggagctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccaaattctaccagaggtacaaggaggaactg
catataaacagaatcacagacaaaaaccacatgattatctcaatagatgcagaaaaggcc
tttgacaaaattcaacaacgcttcatgctaaaaactctcaataaattaggtattgatggg
acatatctcaaaatagtaagagctatctatgacaaacccacagccaatatcatactgaat
gggcaaaaactggaagcattccctttgaaaactggcacaagatggagatgccctctctca
ccactcctattcaacatagtgttggaagttctggccaggccaattaggcaggagaaggaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtccctgtttgcagacgacatg
actgtatatctagaaaaccccattgtctcagcccaaaatctccttaagctgataagcaac
ttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattattatacacc
aacaacaaacaaacagagagccaaatcatgagtgaactcccattcacaattgcttcaaag
agaataaaatgcctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaac
tacaaaccactgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcaatctcatgaaaatggccatactgcccaaggaaatttacaga
ttcaatgccacccccatcaagctaccaatgactttcttcacagaattggaaaaaactact
tcaaagttcatatggaaccaaaaaagagcctgcatcaccaagtcaatcctaagccaaaag
aataaagctggaggcatcacactacctgacttcaaactatactacaaggctacagtaacc
taa

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_4|109_aa
MGKKQSRKTGNSKKQSTSPPPKEHSSSPATEQSWRENDFDELREEGFRRSNYSELREEIQ
TKGKEVENFEKSLEECLTRITNTEKCLKELMELKTKAGELHEECRSLRS

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_4|330_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcacctctcctcct
ccaaaggaacacagttcctcaccagcaacggaacaaagctggagggagaatgactttgac
gagctgagagaagaaggcttcagacgatcaaattactctgagctacgggaggaaattcaa
accaaaggcaaagaagttgaaaactttgaaaaaagtttagaagaatgtttaactagaata
accaatacagagaagtgcttaaaggagctgatggagctgaaaaccaaggctggagaacta
catgaagaatgcagaagcctcaggagctga

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_5|408_aa
MTHSALEYFNVIGQGLKHLFWQQPKKSSMSPCDVQKIQADPEPEIDLESQNTCAETESSP
TSHPTALNQFLQQIQSPTAHDPATTGLSQEDQNLRQTPCVGSVSDLHLSPQLSPYKILQN
GDSTELSDFTPRHIRILTPGRRGVCLYLSESSFIPPPWGVGKWRGPAESGPPDQLSGLWE
TSQAYWLARCRESTSLSLFYGEVGQLATKMALVSVQAGPGDQLAAERGRVRPLRRRWAAK
VSRRGAPCPEAGTAALHGCPRRGIDAEPCPEPQRPRSCPRRPFRSLSRATRSPPGPAPSR
ASSSRAAAWELQTLPPRAIRTLPPRAIPASAAQLATRLAKSPHLGASRPPEAGTGSPARA
GSGDLQRRREGNSPARAGKEPRAEEEGSGDLPFACRLLEEASPDPAPE

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_5|1227_bp
atgacccatagtgctctggagtactttaatgtgattggccaaggcttgaagcatctcttc
tggcagcagcccaagaagtcatccatgtctccatgtgatgtgcagaaaattcaggcagat
ccagaacctgaaatagatctggaaagccagaacacatgtgctgagactgagagtagcccc
acctcccaccccacagctctgaatcagttcctgcaacaaatccaaagtcccactgcccat
gaccctgccaccactggacttagtcaggaagaccagaatctgaggcagacaccatgtgtg
ggctctgtctctgaccttcacctgtctcctcaactgtctccatataaaatactccagaat
ggcgattccactgagctatcagacttcacgcccaggcatatccggatcttgacaccagga
aggaggggcgtgtgtctgtacctatctgagtcttccttcatacctcctccttggggtgtg
gggaagtggagaggaccagcagagagcggcccaccggatcagctgagtgggctttgggag
accagtcaagcttactggctcgcacgctgcagagaaagcacttctctgagcctcttttac
ggagaggtagggcagctggcaacaaagatggccctggtgtccgttcaggctggcccaggg
gaccagctcgcggctgagcggggccgtgtccgtccactccgacggcgctgggctgccaag
gtgagccgccgaggagccccgtgccccgaggcgggcacagccgccctgcatgggtgcccc
cggcgcgggattgacgcagagccctgcccggagccccagcgaccccgttcctgccccagg
cggccgttccgaagcctgagccgggcaacgcgcagcccgcctggcccggctccctcccgc
gcgtcctcgtcgcgagctgccgcctgggagctccagacgctcccgcccagggcgatccgg
acgctcccgcccagggcgatcccggcctctgcagcccagctggcgacacgcctcgccaag
agcccgcacctcggcgcctcacggccaccggaggcggggacagggagtccggcgcgggcc
gggtcgggggatctgcagcggcggcgcgaaggtaactcccccgccagagccgggaaagag
ccccgagcagaggaggaagggagcggggacctgcccttcgcctgccggcttctggaagaa
gcgtctcctgatccggccccggaataa

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_6|454_aa
MGFMDDNATNTSTSFLSVLNPHGAHATSFPFNFSYSDYDMPLDEDEDVTNSRTFFAAKIV
IGMALVGIMLVCGIGNFIFIAALVRYKKLRNLTNLLIANLAISDFLVAIVCCPFEMDYYV
VRQLSWEHGHVLCTSVNYLRTVSLYVSTNALLAIAIDRYLAIVHPLRPRMKCQTATGLIA
LVWTVSILIAIPSAYFTTETVLVIVKSQEKIFCGQIWPVDQQLYYKSYFLFIFGIEFVGP
VVTMTLCYARISRELWFKAVPGFQTEQIRKRLRCRRKTVLVLMCILTAYVLCWAPFYGFT
IVRDFFPTVFVKEKHYLTAFYIVECIAMSNSMINTLCFVTVKNDTVKYFKKIMLLHWKAS
YNGVRREMQVEETQNGKAKLEACRAQCSSGVAGAQALQLSNVSDEEFPPNQTAWHGGPES
RKDNGPMVTCGVHANTGLIISPSPSEIPISFHLV

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_6|1365_bp
atggggttcatggatgacaatgccaccaacacttccaccagcttcctttctgtgctcaac
cctcatggagcccatgccacttccttcccattcaacttcagctacagcgactatgatatg
cctttggatgaagatgaggatgtgaccaattccaggacgttctttgctgccaagattgtc
attgggatggccctggtgggcatcatgctggtctgcggcattggaaacttcatctttatc
gctgccctggtccgctacaagaaactgcgcaacctcaccaacctgctcatcgccaacctg
gccatctctgacttcctggtggccattgtctgctgcccctttgagatggactactatgtg
gtgcgccagctctcctgggagcacggccacgtcctgtgcacctctgtcaactacctgcgc
actgtctctctctatgtctccaccaatgccctgctggccatcgccattgacaggtatctg
gctattgtccatccgctgagaccacggatgaagtgccaaacagccactggcctgattgcc
ttggtgtggacggtgtccatcctgatcgccatcccttccgcctacttcaccaccgagacg
gtcctcgtcattgtcaagagccaggaaaagatcttctgcggccagatctggcctgtggac
cagcagctctactacaagtcctacttcctctttatctttggcatagaattcgtgggcccc
gtggtcaccatgaccctgtgctatgccaggatctcccgggagctctggttcaaggcggtc
cctggattccagacagagcagatccgcaagaggctgcgctgccgcaggaagacggtcctg
gtgctcatgtgcatcctcaccgcctacgtgctatgctgggcgcccttctacggcttcacc
atcgtgcgcgacttcttccccaccgtgtttgtgaaggagaagcactacctcactgccttc
tacatcgtcgagtgcatcgccatgagcaacagcatgatcaacactctgtgcttcgtgacc
gtcaagaacgacaccgtcaagtacttcaaaaagatcatgttgctccactggaaggcttct
tacaatggcgtgagaagggagatgcaagtggaggagactcagaacgggaaggcaaaactg
gaagcatgcagggctcaatgcagctcaggtgtggcaggggctcaggctctccagctctca
aatgtgagtgatgaagagttccctcctaaccagacagcatggcatggtggtccagagagc
agaaaagataatgggcccatggtaacctgtggtgtccatgccaacactggactgattatc
tccccttctcctagtgagataccaataagcttccacctggtttaa

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_7|268_aa
MPRPALARAQCAHPLTCAHCLALPSEMNPVPQMEMQKSPIFCVAHAGSCRPELFLFGHLG
SSSIFVYSERELGELTIVAAPSSCSNTSLFAADSASEHCALASLPSCTMNGCEQVGSCWE
RLRPVFPVDVDRTFLPAHIWQEDGPRCVQSSDAILSLGYDLEHIKPRSKHPVIWQISTSL
GALKVVPAKGHTQLLVYSDFQPKWLWTLLEPPAPSPSINMSLQQMWLNAETLKAPPDSKA
LLWHNILIAFSLLMSLELHMKLLGGNFN

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_7|807_bp
atgcctcgccctgctttggctcgcgcacagtgcgcgcacccactgacctgcgcccactgt
ctggcactccctagtgagatgaacccggtacctcagatggaaatgcagaaatcacccatc
ttctgcgtcgctcacgctggtagctgtagaccggagctgttcctattcggccatcttggc
tcctcctcaatttttgtatatagtgaaagggagctgggtgaattgactattgtagctgct
ccttcctcctgcagtaacacttccctttttgctgctgacagtgcttcagagcactgtgcc
ctggcttccctgccatcatgcacaatgaatggctgtgaacaggttgggagttgttgggaa
aggctaagacctgtcttcccagttgatgtggaccggactttcctaccagctcacatttgg
caagaagatggccctcgatgtgtacaaagctcagatgcaattttgtcactgggttatgat
ctggaacatattaaaccaagatccaaacaccccgtaatttggcaaataagcaccagccta
ggagctctcaaagttgttccagctaaaggacacactcagcttttggtctacagtgacttc
cagcctaagtggctctggacactgctggaaccccccgctccatctccctccataaatatg
tctctgcagcagatgtggctgaacgcagaaacactcaaagcacccccagactccaaagcc
ttactgtggcataatatcctcattgctttttccctccttatgtccctggagctacacatg
aaacttcttgggggcaacttcaactaa

>gi568815596f:68545822_68755573|GENSCAN_predicted_peptide_8|155_aa
MERGLQADEKELEATEGRMWLKSPVCSRRREGGKREVGRNERSTREKNLASAFNASAHTL
SAHIPLANTGHMAKLKVTSSVGLCRTEKTASEKSIWNEEAQEASGCRSHNIIQQTIEACR
TQHSHETATKDWEAQQGIYVTQRWTAYQLSGMWFE

>gi568815596f:68545822_68755573|GENSCAN_predicted_CDS_8|468_bp
atggagagagggctccaggcagatgagaaagagctggaagctacagaagggaggatgtgg
ctgaagtctccagtgtgcagcaggagaagggaaggtggcaagagagaggtgggcaggaat
gaaaggagcacaagagagaagaaccttgcaagcgcatttaacgcctctgcgcacaccctg
tctgctcacattccattggccaacacaggtcacatggccaagctcaaagtcactagcagt
gtgggactgtgccgcacagaaaagacagcttctgagaaaagcatttggaatgaagaagcc
caagaagcctctggatgcaggagccataatattatacaacagaccatagaggcctgcagg
actcagcacagtcatgaaacagccaccaaggactgggaagcccaacagggaatctatgtg
acacagagatggactgcttaccagctaagcggcatgtggtttgagtga