GENSCAN 1.0	Date run:  7-Nov-116	Time: 23:24:09

Sequence gi568815596f:68057935_68274799 : 216865 bp : 38.95% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +    603    755  153  2  0   36   76    85 0.081   1.45
 1.02 Intr +   6669   6831  163  2  1   76   71    99 0.175   5.63
 1.03 Intr +   9140   9367  228  0  0   47   72   137 0.078   4.92
 1.04 Term +  10024  11114 1091  2  2   40   47   239 0.105   6.26
 1.05 PlyA +  11951  11956    6                               1.05

 2.00 Prom +  16790  16829   40                              -4.95
 2.01 Init +  19554  19625   72  2  0  102   67    18 0.566   2.22
 2.02 Intr +  19758  19889  132  2  0   78   89    68 0.548   5.82
 2.03 Intr +  25334  25391   58  1  1  108  101    13 0.154   2.14
 2.04 Intr +  34574  34787  214  0  1  120   43    59 0.352   1.45
 2.05 Intr +  34965  35135  171  0  0   82   76    40 0.298   0.34
 2.06 Intr +  36849  37035  187  0  1   47   98   124 0.571   8.07
 2.07 Term +  37118  37198   81  1  0   95   48    64 0.575  -0.19
 2.08 PlyA +  37884  37889    6                               1.05

 3.20 PlyA -  38179  38174    6                               1.05
 3.19 Term -  45878  45729  150  2  0    1   49   135 0.196  -2.17
 3.18 Intr -  52496  52393  104  0  2   58  100    97 0.353   6.87
 3.17 Intr -  53553  53482   72  1  0  107   73    66 0.536   5.46
 3.16 Intr -  54763  54619  145  1  1   28   60   144 0.539   4.53
 3.15 Intr -  56461  56373   89  2  2   45   52    97 0.296   0.57
 3.14 Intr -  58495  58395  101  0  2   70   69    55 0.433   0.63
 3.13 Intr -  59009  58878  132  1  0    5   56   152 0.302   2.54
 3.12 Intr -  61758  61652  107  0  2   86   50    84 0.105   2.49
 3.11 Intr -  73511  73343  169  1  1   91   93   152 0.314  15.03
 3.10 Intr -  76865  76768   98  2  2   89   86    52 0.966   2.99
 3.09 Intr -  79499  79365  135  2  0  104   94    55 0.991   7.54
 3.08 Intr -  80923  80808  116  2  2   62   55    88 0.988   2.15
 3.07 Intr -  83861  83760  102  0  0   57   27   116 0.731   1.63
 3.06 Intr -  86781  86651  131  2  2   41  101   137 0.944   9.72
 3.05 Intr -  89633  89533  101  2  2   48   95    81 0.547   2.79
 3.04 Intr -  99567  99327  241  2  1   44   90   336 0.019  26.03
 3.03 Intr -  99760  99576  185  1  2   36  -33   221 0.034   2.46
 3.02 Intr - 100223  99862  362  0  2   94   56   245 0.029  15.91
 3.01 Init - 108948 108819  130  0  1   62    4   192 0.121   8.56
 3.00 Prom - 120819 120780   40                              -3.65

 4.12 PlyA - 120942 120937    6                               1.05
 4.11 Term - 123076 123029   48  1  0  119   41    38 0.437  -1.47
 4.10 Intr - 128718 128534  185  1  2   85   87   193 0.932  17.49
 4.09 Intr - 129380 129321   60  0  0   58   78    77 0.737   1.49
 4.08 Intr - 130756 130580  177  2  0   89  116   205 0.998  22.37
 4.07 Intr - 159197 159158   40  2  1  137   93    -4 0.003   1.88
 4.06 Intr - 170067 169972   96  0  0   65   60   116 0.742   5.79
 4.05 Intr - 186940 186852   89  2  2   86   73   112 0.796   8.27
 4.04 Intr - 194292 194191  102  1  0   -4   81   146 0.240   3.93
 4.03 Intr - 194752 194563  190  1  1   42   73    82 0.055   0.34
 4.02 Intr - 195203 195054  150  2  0   81    4   116 0.031   1.94
 4.01 Init - 203296 203255   42  1  0   42  111    31 0.496   1.27

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr + 100446 100595  150  2  0   97   86    80 0.916   8.14
S.002 Intr + 103749 103832   84  2  0   80  105    84 0.919   8.40
S.003 Intr + 104331 104391   61  2  1   67  101    37 0.883   0.29
S.004 Term + 104612 104733  122  0  2   77   42    70 0.842  -1.04


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:68057935_68274799|GENSCAN_predicted_peptide_1|544_aa
MAQQKQVTGLVSGKVRQNGTQIEWRRNIPHKSHQWICVGCSLDKIFNTTYKPPMVTPRQT
GSRVDLQQTPTDLQLRVLTVRRKTNKKKRHPHQKPICTSPSSKTKEIQTTIREYYKHLYT
NKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITVSETEAIINSQPKKVQDQTDSQPNST
RDEMIVYLENPIVSAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFT
IASKRIKYLGIHLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGTINNVKMAILPK
VIYRFNAIPIKLPMTFFTELEKTTLKFIWNQKRAHVAKTILSQKNKAGGITLPDFKLYYK
ATVTKTAWYWYQNRYIDQWNRIGPLEIIPHIYNHLIFDKPEKNKKWGKDSLFNKWCWENW
LAICRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKPLEENLGNTIQAIGMGKDFMTKTPK
AMATKAKIDKWDLIKLKSFCTAKEIIIRVNRQPTEWEKNFTIYPSDKRPLSRIYKELKQI
YKKK

>gi568815596f:68057935_68274799|GENSCAN_predicted_CDS_1|1635_bp
atggcacaacagaaacaggtcacagggctggtaagtggtaaagttcggcagaatggaact
caaatcgaatggaggaggaacatccctcacaaatcccatcagtggatttgtgtgggatgc
tctctggacaaaatctttaatacaacatataagcctccgatggtgacacccaggcaaaca
gggtctagagtggaccttcagcaaactccaacagacctgcagctgagggtcctgactgtt
agaaggaaaactaacaaaaagaaaagacatccacaccaaaaacccatctgtacgtcacca
tcatcaaagaccaaagaaatacaaactaccatcagagaatactataaacacctctacaca
aataaactagaaaatctagaagaaatggataaattcctcgacacatacaccctcccaaga
ctaaaccaggaagaagttgaatccctgaatagaccaataacagtttctgaaactgaggca
ataattaatagccaaccaaaaaaagtccaggaccagacggattcacagccgaattctacc
agagatgaaatgattgtatatttagaaaaccccatagtctcagcccaaaatctccttaag
ctgataagcaactttagcaaagtctctggatacaaaatcaatgtgcaaaaatcacaagca
ttcctatacaccaataacagacaaacagagagtcaaatcatgagtgaactcccattcaca
attgcttcaaagagaataaaatacctaggaatccatcttacaagggatgtgaaggacctc
ttcaaggagaactacaaaccactgctcaatgaaataaaagaggatacaaacaaatggaag
aatattccatgctcatggataggaacaatcaataatgtgaaaatggccatactgcccaag
gtaatttatagattcaatgccatccccatcaagctaccaatgactttcttcacagaattg
gaaaaaactactctaaagttcatatggaaccaaaaaagagcccacgttgccaagacaatc
ctaagccaaaagaacaaagctggaggcatcacgctacctgacttcaaactatactacaag
gctacagtaaccaaaacagcatggtactggtaccaaaacagatatatagaccaatggaac
agaatagggcccctggaaataataccacacatctacaaccatctgatctttgacaaacct
gagaaaaacaagaaatggggaaaggattctctatttaataaatggtgctgggaaaactgg
ctagccatatgtagaaagctgaaactggatcccttccttacaccttatacaaaaattaat
tcgagatggattaaagacttaaatgttagacctaaaaccataaaacccctagaagaaaac
ctaggcaataccattcaggccataggcatgggcaaagacttcatgactaaaacaccaaaa
gcaatggcaacaaaagccaaaattgacaaatgggatctaattaaactaaagagcttctgc
acagcaaaagaaattatcatcagagtgaacaggcaacctacagaatgggagaaaaatttt
acaatctacccatctgacaaaaggccactatccagaatctacaaagaacttaaacaaatt
tacaagaaaaaatga

>gi568815596f:68057935_68274799|GENSCAN_predicted_peptide_2|304_aa
MTLNSQLTHGPFPRYMSEPSQDQQFCRIEVQDLVAVMLVSDEASLPGLQMATFPPCPPHM
ASPLHMHRMGPSSYRKTISGLSLILRYGKNNVCESLIFKIMSLDIIPVRVVYRKQQKITL
ADLSREKHVLLCCSIAQGISTVLEPGLEKEARQGKLGSSSQFKGNSRYIHLVKPGSHTCI
LAAREAKKCVEFSAPKVGVKQLKKERRFPLRCDKRSCQEPRASSLVSSSRNLRESRRDPG
HWHWQNVAGVAACSTEVAWRVRPIRKSCGWKEFVHKGQQANAHEASDYEVGQIELTQFFS
SLQA

>gi568815596f:68057935_68274799|GENSCAN_predicted_CDS_2|915_bp
atgaccctcaactcacagctgactcatggcccattccctaggtacatgagtgaacccagc
caagatcagcagttctgtaggatagaagttcaagatctagttgccgtcatgttggtttct
gatgaggcctctcttcctggcttgcagatggccaccttcccaccatgtcctcctcacatg
gcctctcctctgcacatgcacagaatgggaccatctagttacaggaaaacaatctcaggg
ctctcactgattctacgttatggtaagaataatgtatgtgagagtcttatattcaagata
atgagtttggatattataccagtcagagttgtttaccgcaagcaacagaaaataactcta
gctgatttaagcagagaaaagcatgtgttgctgtgttgttcaatagctcaaggcatttca
acagtgttggaaccaggcttagaaaaggaggccagacaagggaagctaggcagcagctcc
cagttcaaaggcaatagcaggtacatccatttagtcaagcctgggtcacatacctgcatc
ctagctgcaagggaggctaaaaaatgtgtggagttttcagctcctaaagtgggagtcaag
cagctaaaaaaagagagacggtttccactgagatgcgacaaacggagctgccaagagccc
agggcctcaagccttgtgagcagctccaggaatctcagggaatcgagaagagacccagga
cactggcattggcaaaatgttgctggtgtggccgcgtgtagcactgaagtggcctggagg
gtgcggcccattcggaagagctgtggctggaaagagtttgtacataagggacagcaagca
aatgcacatgaagccagtgactatgaagtcggtcagattgaattgactcagtttttctca
agtcttcaagcgtga

>gi568815596f:68057935_68274799|GENSCAN_predicted_peptide_3|889_aa
MPEELTEDDLMEVSASEAVPGDEEDDVEAAVSENKVTLDNLAEGSQPHTRSPSPQRGGKT
GLFAGLASSVSMRPASPPSPAADSCSACRFFARRPPLRVTWVKPSSALALCVSISDSIPG
NLKALPAETRAQLHHAEASLSQPPLQLRPFPKTSQAGDLQDLGPYVCVRKAVGKGDKQIR
AVVKEHSVRSQERIWHYPGITTANMPGHLGQNTESGRDKLPMFGVWLPFLGALGVAVAVA
EIGCTMSAFEKPQIIAHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGD
LKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIIN
AIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA
YNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK
FHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQR
SKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTEPILITAHNK
DCISQSPYQQGVDTVEHEDGPVVQRGSECCNLEVPRDTAFQEAAVTGISTRDFLPGFDLT
YPWELLTQSLSFYMAHPNWKHTGKRILGNVIQPRQVGIYKANSDLWTSHSTFAGLYLQPE
KRAVESLPVKRDKGGVSEVKTEASGNPEGQALTHEACFTPNRQSPSKEAVQIHMPVVPPT
SGKAGFGVELGTYLSGTIYNTHHQQDDFMVHDDCKDLAIKPLRRFEEGIKIEGWKVAHLP
GSNQDSQLDEIKSANIPSRKIWMLMGSEWVVKIPPLELGFPIINERIVG

>gi568815596f:68057935_68274799|GENSCAN_predicted_CDS_3|2670_bp
atgccagaggaattaacagaagacgacttgatggaggtgagtgcttctgaagcagtgccg
ggtgatgaggaagatgatgtagaagcagcagtgtcagaaaacaaggtgacattagacaat
ttggcagaagggtcccagccacataccaggagcccgtccccacagaggggtgggaagacg
ggcctcttcgccggcctggcctcctctgtgtccatgcggcccgcatccccgccctctcct
gctgcggacagctgttcagcctgtcgtttcttcgcccgtcggccacccttgcgggtgacc
tgggtaaagccctcctctgccctggcgctctgcgtttccatttcggattccatccccgga
aatcttaaagcgctgccggctgaaacacgtgcgcagctgcaccacgcagaagccagcctc
agccaaccacccctgcagctccgcccctttcctaaaacgtcacaggccggggacctgcag
gatttggggccgtatgtatgtgtgcgaaaggcagtgggtaaaggcgataaacaaattcgt
gctgttgtgaaggaacattctgtgcgatcgcaggagcgcatctggcattatccggggata
actacagccaacatgccagggcatctggggcagaatacggaaagcgggagggacaaattg
ccaatgtttggagtctggttgccgtttttgggggctctgggtgtggcggttgccgtagct
gaaattggctgcaccatgtcggccttcgagaagcctcagatcatcgcccatatccagaag
ggcttcaactacacggtgtttgactgtaagtgggtgccctgcagcgccaaatttgtgacc
atgggcaacttcgcacggggcaccggcgtcattcagctgtacgagatccagcacggggac
ctgaagctgcttcgggagattgaaaaggccaaacctattaaatgtggaacatttggtgca
acatctttacagcagagatatttagctactggagattttggtggaaaccttcatatatgg
aatttagaagctccagagatgccagtatattctgtaaagggccataaagaaattataaat
gccatagatggcataggtggactaggaattggagaaggagcacctgaaattgtgactggc
agccgagatggaactgtgaaggtgtgggacccaaggcaaaaagatgatcctgttgctaat
atggaacctgtacaaggagaaaacaagagagactgttggactgtggcatttggcaatgct
tataatcaagaagaacgtgttgtttgtgctggctatgacaatggggatatcaaactattt
gatctcagaaatatggcattacggtgggagacaaacatcaaaaatggggtgtgtagcttg
gagtttgacagaaaagacataagtatgaataagttagtagccacatctctggaaggaaag
ttccatgtttttgacatgagaacacagcatccaaccaaaggttttgcctctgtttcagaa
aaggctcataaatctactgtgtggcaggtccgacacctgccgcagaacagggagctcttt
ctgacagctggaggcgccggcggccttcacctctggaagtatgaataccctattcagcgg
tcaaagaaagattctgagggaatagaaatgggagtcgcaggttctgtaagccttctgcag
aatgttacgttgtccacccagcccatttcaagtttggattggagtccagataaaaggggt
ctctgcgtctgtagttcatttgaccaaacggagcccattttaatcacagcacataataaa
gactgtatctcccagtctccctatcagcaaggtgtggacactgtggagcatgaggatggg
cctgtcgtccagaggggctctgaatgctgcaatttagaggttccacgtgacactgccttc
caggaagcagccgtaacaggaatcagcactagggatttcttaccaggatttgatcttacc
tacccatgggagctgctgacacagtctctgagcttctacatggcccaccctaactggaaa
catacaggaaagcgaattctgggaaatgtaattcagcctcgccaggttggcatttataaa
gccaactcagatctttggacaagtcattccacctttgcaggcctctacctgcaacccgaa
aaacgggcggtggagagtctgccagtcaaacgggataagggaggagtctctgaagtcaag
acggaagccagtggaaacccagagggtcaggcactgactcacgaggcctgcttcacaccc
aataggcaaagcccctcaaaagaagccgttcagatccacatgcccgtggtgccccccacc
tcaggaaaagcgggatttggtgtggaactcggaacttacttgtcaggcactatctacaac
acccatcaccagcaggatgatttcatggttcatgatgactgcaaggaccttgccatcaaa
ccactgagaaggtttgaagaaggaataaagatagaagggtggaaagtggcacatcttcca
ggctccaaccaggatagtcaattggatgaaataaaatcagcaaatatcccctctaggaag
atttggatgctgatgggatctgaatgggttgtgaaaatccctcctttggagcttggattc
ccaataattaatgaacgtatagttggctag

>gi568815596f:68057935_68274799|GENSCAN_predicted_peptide_4|392_aa
MYRQISSRKVGTEQMGLRVLHRGDSSPDGPCNSVVDPSRYTDAQIPLTASRRTWIFPVFW
CGIRRSPTRARQSAAALAAQRGAQVPGCAALAEAPPPPRALQHSAFPSLSALPFFRALRL
RVSASRCRPQLGRRRRFLRASLSATLLRASEPASRRPAEQNDTWYMVDVKYYLKEYVKWN
KGKGAYRTLKARSAESSSQCSNAGKEYKGIQIGKKKNGSRLQMGNEASYPLEMCSHFDAD
EIKRLGKRFKKLDLDNSGSLSVEEFMSLPELQQNPLVQRVIDIFDTDGNGEVDFKEFIEG
VSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTII
NADKDGDGRISFEEFCAVVGGLDIHKKMVVDV

>gi568815596f:68057935_68274799|GENSCAN_predicted_CDS_4|1179_bp
atgtatagacaaatttcctcaagaaaagtgggcactgaacagatgggcctgcgggtgctg
caccggggtgacagcagtcctgatgggccgtgcaattctgtagtggatccaagtcggtac
acggatgcacagatacctttgactgcctctcgcaggacttggatttttcctgttttttgg
tgcggcatccggcgttccccaaccagagctcgccagagcgccgcggcactcgccgcccag
cggggcgcgcaggttcccggatgtgcggcgctcgcggaagccccgcccccgccccgcgcg
ctgcagcactccgctttcccctccctctccgccctccccttttttcgtgccttgaggttg
cgggtcagcgcgagccgctgcaggccgcagctgggccgccgccgccgtttcctgcgagcc
agcctgagcgcaacacttctccgagccagcgagccagcgagccgccgacccgccgagcaa
aatgatacttggtatatggtagatgttaagtactatttgaaggagtatgtgaagtggaat
aaaggaaaaggtgcttatcggacattgaaggcacgtagtgctgaaagttctagtcagtgc
agtaatgcaggaaaagaatataaaggcatacagattggaaagaagaaaaacggatcccgt
ttgcagatgggaaatgaggcaagttatcctttggaaatgtgctcacactttgatgcggat
gaaattaaaaggctaggaaagagatttaagaagcttgatttggacaattctggttctttg
agtgtggaagagttcatgtctctgcctgagttacaacagaatcctttagtacagcgagta
atagatatattcgacacagatgggaatggagaagtagactttaaagaattcattgagggc
gtctctcagttcagtgtcaaaggagataaggagcagaaattgaggtttgctttccgtatc
tatgacatggataaagatggctatatttccaatggggaactcttccaggtattgaagatg
atggtggggaacaatctgaaagatacacagttacagcaaattgtagacaaaaccataata
aatgcagataaggatggagatggaagaatatcctttgaagaattctgtgctgttgtaggt
ggcctagatatccacaaaaagatggtggtagatgtgtga