GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:04:22

Sequence gi568815596f:65105109_65305987 : 200879 bp : 42.57% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +  24689  24906  218  0  2  102   44   268 0.614  20.12
 1.02 PlyA +  26077  26082    6                               1.05

 2.00 Prom +  29991  30030   40                              -8.75
 2.01 Init +  46734  46790   57  2  0   96   94   108 0.908  13.56
 2.02 Term +  51336  51359   24  2  0  110   37    61 0.809   0.45
 2.03 PlyA +  52043  52048    6                               1.05

 3.04 PlyA -  52075  52070    6                               1.05
 3.03 Term -  56043  55989   55  2  1  108   46    47 0.389  -1.45
 3.02 Intr -  58147  58041  107  1  2   80   63    61 0.422   0.89
 3.01 Init -  60773  60603  171  2  0   75   83   126 0.952  10.29
 3.00 Prom -  67361  67322   40                              -7.05

 4.04 PlyA -  67858  67853    6                               1.05
 4.03 Term -  71079  70889  191  1  2   86   43    81 0.505   0.03
 4.02 Intr -  72617  72450  168  0  0   75   81    67 0.383   3.70
 4.01 Init -  72916  72709  208  1  1   41  100    98 0.376   3.60
 4.00 Prom -  75499  75460   40                              -6.95

 5.00 Prom +  76644  76683   40                              -5.15
 5.01 Sngl +  83953  84249  297  0  0   68   50   227 0.951  12.40
 5.02 PlyA +  85274  85279    6                               1.05

 6.00 Prom +  91504  91543   40                              -3.95
 6.01 Init + 100001 100852  852  1  0  106   53   826 0.003  75.59
 6.02 Intr + 122327 122511  185  1  2   53   51   164 0.001   6.86
 6.03 Intr + 123627 123633    7  0  1   97   95     0 0.000  -5.58
 6.04 Intr + 134744 134854  111  1  0   86   85    94 0.933   8.56
 6.05 Intr + 141416 141631  216  1  0   29  105   236 0.982  17.18
 6.06 Intr + 145919 145991   73  1  1  112  100    40 0.992   5.66
 6.07 Intr + 148620 148756  137  1  2   87  115    11 0.986   3.07
 6.08 Intr + 150437 150586  150  1  0   67   98   164 0.999  14.74
 6.09 Intr + 156139 156284  146  0  2   76   88   177 0.999  14.66
 6.10 Intr + 159935 160067  133  2  1   79   84   122 0.999  10.63
 6.11 Intr + 163456 163609  154  0  1  118   42   198 0.004  16.92
 6.12 Intr + 166637 166659   23  0  2   68   83    19 0.000  -4.26
 6.13 Intr + 181015 181301  287  0  2   78   48   208 0.510  11.02
 6.14 Intr + 185624 185774  151  2  1   60   29   128 0.600   3.34
 6.15 Intr + 186444 186648  205  2  1   86   70    84 0.561   4.25
 6.16 Term + 187425 187573  149  1  2   50   52   125 0.627   2.18
 6.17 PlyA + 187761 187766    6                               1.05

 7.00 Prom + 192672 192711   40                              -5.55
 7.01 Sngl + 196503 196769  267  2  0   75   42   203 0.544   9.39
 7.02 PlyA + 197993 197998    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  93377  93475   99  1  0   95   99    65 0.918   8.61
S.002 Sngl + 100001 100882  882  1  0  106   36   865 0.995  78.87
S.003 Term + 163456 163626  171  0  0  118   37   249 0.996  19.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_1|72_aa
XDAPTSAPTLLDPFKIPQAGPRTQPTGALLNSLFGIHAGHVTAAAAAATAALAAAAAALT
LRATGNRKKGMR

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_1|219_bp
nccgatgccccgacttctgccccaaccctcctcgacccctttaagatcccccaagctggc
ccacggacccagccgaccggtgctctcctgaactcactattcgggattcatgctggacat
gtcactgcagctgccgccgccgccaccgccgcccttgctgccgcagccgccgccctgact
ctccgcgccacgggtaatcgaaagaaaggaatgagatag

>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_2|26_aa
MRPQTATVDEEDPNLEKTQIVDEIYA

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_2|81_bp
atgaggccacagacagcaactgtggatgaagaggatccaaatctggagaagacgcagatt
gtggacgagatctatgcatga

>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_3|110_aa
MDVWAFTRHRYFHINSRCFVTGEELEKKGSVSMQRQQGKLTMQPKQGGKQLVKDHVLLCP
RTRYRKGVCPEAADTLFYVSCGQAMNNIYDERRTHPECDPFLPLPLYTLV

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_3|333_bp
atggacgtgtgggcttttacaagacacagatattttcacatcaactctagatgctttgtt
actggggaagaacttgagaaaaagggaagtgtctccatgcaacggcaacaagggaaactc
actatgcagccaaaacagggaggaaaacaacttgtaaaagatcatgtgttattatgccca
aggaccaggtacaggaaaggagtttgccctgaagctgcagataccctattttatgtcagc
tgtggacaggctatgaataatatttacgacgaaagaagaactcatccagaatgtgatcct
tttttacccctgccactctacacgctggtttga

>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_4|188_aa
MGALPRFCWKGGSPALRGTAAAAQSQMWNPVSLNSQRPGRPPAPHSLGCACSHCLASPHS
WCLLQLQSKDCGRLMSMGGRLSGGRRQLDVGLQVLFGMNSLGAMGTMDGRVMAAGGRQAP
GQKKAGTGACSRSCVQYIWFSHSLARGLCWHLELLALLQQPARLAVHSGWTPRLLTYTIL
AALRLVCV

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_4|567_bp
atgggagccctgccccgtttttgttggaagggtgggagccctgccctccggggcacagct
gcagctgcccagtcgcagatgtggaatccagtatccctgaactctcagcgaccaggaagg
ccccctgccccccacagtcttgggtgtgcctgctcccactgcctggcctctccccactcc
tggtgcctgctccaacttcagagcaaagactgtgggcgcctaatgagcatgggagggagg
ctgagtgggggccgaaggcagcttgatgtgggcctgcaggtgctctttggcatgaacagc
ctgggtgccatgggcaccatggatggcagagtgatggcagcaggaggcagacaggctcct
gggcagaaaaaggcaggtacgggtgcctgcagcagaagctgcgtgcagtatatctggttc
agtcacagccttgcacggggcctgtgctggcacctggagctgcttgccctgctgcagcag
ccagcacgcctggctgtgcacagtgggtggaccccgcgcttgctcacctacacaatcctc
gcagctctgcgcctggtttgcgtttag

>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_5|98_aa
MSSENILQAKVARGGRVERAVLDVDYTPSEDRAKYGWFLWTKCGSWVPLGSFPRKTMGSQ
KRGGLKDDRERSKWQSDERHYQESLRDSRRGSPGISIP

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_5|297_bp
atgagttctgaaaacattctccaggccaaagtggccagaggtggcagagtagagagggct
gtgttagatgtggactacacgccctctgaggacagggcaaagtacgggtggttcttatgg
accaaatgtggatcctgggtccctcttggatccttccctagaaagaccatgggatcccaa
aagagaggtggcctgaaagatgacagggagcggtcaaaatggcagtcagatgagaggcat
taccaggaatctctgagggactcaaggaggggaagccctgggatctccatcccctag

>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_6|992_aa
MATHGQTCARPMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNT
DTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQGLKLTFDTTFSPNTGK
KSGKIKSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFA
VGYRTGDFQLHTNVNDGTEFGGSIYQKVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPT
ASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKLLRHIPLPQQNRCPSP
ACVFCSSLSSALSSCDTLGRKPQHRRCWPPLTPGKAPGTRSSEEPGIQFVKCGYAGSNFP
EHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHL
WDYTFGPEKLNIDTRNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYA
QGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSA
DFETVRMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQP
HLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLER
VLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK
LGPESQTANCHEGTSKISESYNVTYGRRHEKQDMQQRASLEMAGAGAGGSNKSVILKGVF
MCSLRVSCEENSQGDTDYETARALELFAKSRSQGFTPSPDQKQGITGGEVLLESSGERPG
MLLNIPQCTGQPPHKSKVAQNVNSVEVEKPCVRVRSDDDCLGNTQESLNCSQDLVETTPV
SVTSRPWVFITIAILEEHSCTKAPRASSLCHKYPKKNVSELFQGLHPFLLEKSLPKPAHT
APGRRRRGEASQPFSETSNSPGLELVPFSAQR

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_6|2979_bp
atggcgacccacggacagacttgcgcgcgtccaatgtgtattcctccatcatatgctgac
cttggcaaagctgccagagatattttcaacaaaggatttggttttgggttggtgaaactg
gatgtgaaaacaaagtcttgcagtggcgtggaattttcaacgtccggttcatctaataca
gacactggtaaagttactgggaccctggagaccaaatacaagtggtgtgagtatggtctg
actttcacagaaaagtggaacactgataacactctgggaacagaaatcgcaattgaagac
cagatttgtcaaggtttgaaactgacatttgatactaccttctcaccaaacacaggaaag
aaaagtggtaaaatcaagtcttacaagagggagtgtataaaccttggttgtgatgttgac
tttgattttgctggacctgcaatccatggttcagctgtctttggttatgagggctggctt
gctggctaccagatgacctttgacagtgccaaatcaaagctgacaaggaataactttgca
gtgggctacaggactggggacttccagctacacactaatgtcaatgatgggacagaattt
ggaggatcaatttatcagaaagtttgtgaagatcttgacacttcagtaaaccttgcttgg
acatcaggtaccaactgcactcgttttggcattgcagctaaatatcagttggatcccact
gcttccatttctgcaaaagtcaacaactctagcttaattggagtaggctatactcagact
ctgaggcctggtgtgaagcttacactctctgctctggtagacgggaagagcattaatgct
ggaggccacaagcttctccgccacattccactgccgcagcagaaccggtgtccttcacct
gcctgcgtcttctgcagttcgttaagcagcgcccttagctcctgtgacactttagggaga
aagccgcagcaccggcgatgttggccgccattaacgcccggcaaagcgcccggaactaga
agcagcgaagaacccggtatacagtttgtgaagtgtggatatgcaggctctaactttcca
gaacacatcttcccagctttggttggaagacctattatcagatcaaccaccaaagtggga
aacattgaaatcaaggatcttatggttggtgatgaggcaagtgaattacgatcaatgtta
gaagttaactaccctatggaaaatggcatagtacgaaattgggatgacatgaaacacctg
tgggactacacatttggaccagagaaacttaatatagataccagaaattgtaaaatctta
ctcacagaacctcctatgaacccaaccaaaaacagagagaagattgtagaggtaatgttt
gaaacttaccagttttccggtgtatatgtagccatccaggcagttctgactttgtacgct
caaggtttattgactggtgtagtggtagactctggagatggtgtgactcacatttgccca
gtatatgaaggcttttctctccctcatcttaccaggagactggatattgctgggagggat
ataactagatatcttatcaagctacttctgttgcgaggatacgccttcaaccactctgct
gattttgaaacggttcgcatgattaaagaaaaactgtgttacgtgggatataatattgag
caagagcagaaactggccttagaaaccacagtattagttgaatcttatacactcccagat
ggacgtatcatcaaagttgggggagagagatttgaagcaccagaagctttatttcagcct
cacttgatcaatgttgaaggagttggtgttgctgaattgctttttaacacaattcaggca
gctgacattgataccagatctgaattctacaaacacattgtgctttctggagggtctact
atgtatcctggcctgccatcacggttggaacgagaacttaaacagctttacttagaacga
gttttgaagggtgatgtggaaaaactttctaaatttaagatccgcattgaagacccaccc
cgcagaaagcacatggtattcctgggtggtgcagttctagcggatatcatgaaagacaaa
gacaacttttggatgacccgacaagagtaccaagaaaagggtgtccgtgtgctagagaaa
cttgggccggagtcccagacagcgaactgccatgaagggacatcaaagataagcgaatca
tacaatgtaacctatggcaggaggcatgagaaacaagatatgcaacagagggcctctttg
gaaatggcaggagcaggggctggaggcagcaacaaaagtgtcatcttgaaaggcgtcttc
atgtgcagcttgagagtcagctgtgaggaaaatagccaaggagacacagactatgagact
gcccgtgccctagagctctttgcaaaatcaaggtctcagggcttcaccccatcccctgac
caaaagcaagggataactgggggtgaggtgcttcttgaatctagtggggagaggcctggg
atgctgctgaacatcccacaatgcacaggacagccccctcacaagagtaaagtggcccaa
aatgtcaatagtgttgaggttgagaaaccctgtgttagagttaggtctgatgatgactgt
ttagggaatacccaagagagtctaaattgctcacaggatttggtagaaaccactcccgtt
tcagtcaccagccggccctgggtctttatcacaattgctatcctagaggaacacagctgc
acgaaggcaccaagggcttcctccttatgccacaaatatcctaagaagaatgtctcagaa
ttatttcaagggcttcatcccttcctgctggagaaatcgctgccaaagcctgctcacaca
gcccctgggcggcggaggcgaggtgaagccagtcagcctttctccgagacttccaactca
ccgggcctggagctcgtccccttctcagcccagcgctga

>gi568815596f:65105109_65305987|GENSCAN_predicted_peptide_7|88_aa
MRQRQLLPRLDKRGKNVGWILQQAPNVDSKDPRMSVEAEQAHLTPLAASPSDSREVSQRH
ETWHQLPDQDETMNQSECSRITLSWGCI

>gi568815596f:65105109_65305987|GENSCAN_predicted_CDS_7|267_bp
atgagacagaggcagctattacccaggctcgacaaaagaggaaaaaacgtgggatggatt
ttgcaacaagccccaaatgttgattccaaggacccgaggatgagtgtagaagcggagcag
gcacacctgacacccctcgcggcatccccttcagattcccgggaagtctcacagagacat
gaaacctggcatcagctccctgaccaagatgagaccatgaaccagtcagaatgttcacga
atcacattgtcctggggatgcatttag