GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:26:46

Sequence gi568815596f:62046414_62247253 : 200840 bp : 43.06% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   9100   9304  205  0  1   74   91    87 0.459   6.61
 1.02 Intr +  22925  22989   65  0  2   88  106    -5 0.017  -0.26
 1.03 Intr +  68383  68489  107  0  2   59   37   103 0.004   1.31
 1.04 Intr +  72277  72400  124  1  1  103   22    39 0.017  -0.61
 1.05 Term +  89418  89528  111  2  0  106   49   147 0.993  11.16
 1.06 PlyA +  90609  90614    6                               1.05

 2.00 Prom +  98414  98453   40                              -7.36
 2.01 Init +  99964 100722  759  0  0   60   49   686 0.718  56.60
 2.02 Intr + 101524 101610   87  0  0   73  103    74 0.754   7.57
 2.03 Intr + 110630 110749  120  1  0   64   93    20 0.171   0.79
 2.04 Intr + 131038 131301  264  0  0   70   43   119 0.146   3.31
 2.05 Intr + 148330 148437  108  0  0   77   51    55 0.000   1.18
 2.06 Intr + 150179 150486  308  1  2   85   37   100 0.000  -0.15
 2.07 Intr + 165875 165997  123  2  0  102   93    52 0.239   6.80
 2.08 Intr + 170922 171061  140  0  2   57   89    28 0.125  -0.09
 2.09 Term + 172297 172418  122  2  2   61   55    46 0.089  -2.76
 2.10 PlyA + 172511 172516    6                               1.05

 3.00 Prom + 175588 175627   40                              -5.16
 3.01 Init + 175808 176925 1118  1  2   52   19   915 0.556  74.76
 3.02 Intr + 182387 182405   19  2  1  103   67    10 0.276  -2.99
 3.03 Intr + 182807 182828   22  1  1  101  115    -6 0.491   0.52
 3.04 Intr + 185796 185910  115  1  1   84   59   132 0.938   9.41
 3.05 Intr + 188233 188304   72  1  0   65  116    44 0.673   3.42
 3.06 Term + 193305 193398   94  0  1   84   37    49 0.423  -3.30
 3.07 PlyA + 194241 194246    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:62046414_62247253|GENSCAN_predicted_peptide_1|203_aa
MKPSKLLCHMETKHPALKDKPLEFFKRRKCEYKEQKQLLKATTSNVSALRASFLVANHIA
KAKKPFTIGLCRIRKEANMGDLKIFSETGKPMHVYKAAAGYQEVAIRKIEEAGYCCRFQA
GSEVPWFYPGSPRKLNYISKSSSMRVRPDMASAKMGWQTWAIKQIALESEFLCLEFDEVK
VNQILKTLSEVEESISTLISQPN

>gi568815596f:62046414_62247253|GENSCAN_predicted_CDS_1|612_bp
atgaaaccttcaaaactgctttgccacatggagaccaagcaccctgcattaaaagacaag
cctttggagtttttcaaaagaagaaaatgtgaatacaaagaacagaagcaattattgaag
gccaccacttcaaatgtgtctgcattgagagcatcattcttagtagctaaccacattgct
aaagctaagaagccctttactattggactttgtagaataaggaaagaggcaaatatggga
gatttgaagattttcagtgagacaggcaaaccgatgcatgtgtacaaggcagcagcagga
tatcaggaggtagccattaggaagatcgaggaagcaggatactgctgcagatttcaggct
ggcagcgaggttccttggttttatcctggcagtccccgtaaattaaattacatttcaaaa
tcaagttcaatgagggtgaggccagatatggcttctgccaaaatgggctggcagacctgg
gcaattaagcagatagctttggaatctgaatttctgtgtttggaatttgatgaggtcaaa
gtcaaccaaattctgaagacgctgtcagaggtagaagaaagtatcagcacactgatcagc
cagcctaactga

>gi568815596f:62046414_62247253|GENSCAN_predicted_peptide_2|676_aa
MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL
AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFANQIQAAFREPR
LLVVTDPRADHQPLMEASYVNLPTIALCNTDSPLHYVDIAIPCNNKGAHSVGLMWWMLAR
EVLRMRGTISCEHPWEVMPDLYFYRDPEEIEREEQAAAEKAVTKEEFQGEWTAPAPEFTV
TQPEVADWSEGVQTDKYHCVTVVYSIQYSNMLYRFVAHKLYHPLTTLRTSDSCQASLLQP
DLGGKPAETAECVAREEPSARQSIQSLSQHLLITKLFDQPVLLITKLLISQYLWITNLLI
SQHLLITKLFDQPALIDHQAIDQPGLIDHQAIDHPALTDHQTGTELGDTVRTRTHVALCI
RSNLVFLPLLSLVKGKGRLLSGLSSQPPNLSPEGEERDTARCGALEPPNPFRAHLALEPG
DLPPPRCTPTSGGSGAGAMRALARGIWGRASSSGARGHFGEGGARDSSLAPPHPTLALRR
PPVPHGEISSGIGGTRSLRLGGPYPTQIIASYSLSAPMCVPQAPLVLAICCVTLDKFSHL
STHPVPPTLCLSEISSGNLEYLPQRIAGAWYIFVKAGKSSVPSELPFSPGKVASRAMRNE
QENALRAGGLEHLNES

>gi568815596f:62046414_62247253|GENSCAN_predicted_CDS_2|2031_bp
atgtccggagcccttgatgtcctgcaaatgaaggaggaggatgtccttaagttccttgca
gcaggaactcacttaggtggcaccaatcttgacttccagatggaacagtacatctataaa
aggaaaagtgatggcatctatatcataaatctgaagaggacctgggagaagcttctgctg
gcagctcgtgctattgttgccattgaaaaccctgctgatgtcagtgttatatcctccagg
aatactggccagagggccgtgctaaagtttgctgctgccactggagccactccaattgct
ggccgcttcactcctggaaccttcgctaaccagatccaggcagccttccgggagccacgg
cttcttgtggttactgaccccagggctgaccaccagcctctcatggaggcatcttatgtt
aacctacctaccattgcgctgtgtaacacagattctcctctgcactatgtggacattgcc
atcccatgcaacaacaagggagctcactcagtgggtttgatgtggtggatgctggctcgg
gaagttctgcgcatgcgtggcaccatttcctgtgaacacccatgggaggtcatgcctgat
ctgtacttctacagagatcctgaagagattgaaagagaagagcaggctgctgctgaaaag
gcagtgaccaaggaggaatttcagggtgaatggactgctccagctcctgagttcactgtt
actcagcctgaggttgcagactggtctgaaggtgtacagacagacaaataccattgtgtt
acagttgtctacagtattcagtacagcaacatgctgtacaggtttgtagcccataaactc
taccatccattaaccacactccgaacctcagacagttgccaggcctcccttcttcagcca
gacttgggcgggaagcctgctgaaactgcagaatgtgtggccagagaggagccctcagca
aggcagtctattcaatcactcagccagcacttattgatcaccaagctatttgatcaacca
gtactattgatcaccaagctattgatcagccaatacttatggatcaccaacctattgatc
agccagcacttactgatcaccaagctatttgatcagccagcacttattgatcaccaagct
attgatcagccaggacttattgatcaccaagctattgatcacccagcacttactgatcac
cagacaggcactgaactaggagatacagtgaggacccgcacccacgtggctctgtgcatc
cgcagcaacttggtctttcttcctttgctgagtttggttaagggaaagggccgattattg
agtgggctcagttcacagccacccaacctcagcccagagggagaggagagggacaccgcc
cgctgcggggctttggaacctcccaacccattccgtgcccacctcgccctggagcccggg
gaccttccccctcctcgctgcaccccaacttccgggggatccggcgccggggcgatgcgg
gctttggcaaggggcatctggggccgggcctcctcatccggggcgcgcgggcatttcggg
gaggggggcgcgcgtgattcctcgctcgcacccccgcaccccaccctcgcactgcgccgg
cctcccgtgccgcatggggagatcagctctggcatcggtggtaccaggagcctaagactg
ggtggtccttatccaacccagatcattgcttcctacagcctctcagcccccatgtgtgta
ccccaagcccccctggtgctggccatctgctgtgtgacattggacaagttcagtcacttg
tccacccaccccgtgccccctaccctgtgcctcagcgaaataagcagtgggaatttagag
tatctgcctcaaaggattgctggtgcttggtacatatttgttaaggcaggcaaatcatca
gtcccctctgagcttccattttctcctggtaaagtggcatcccgtgcaatgagaaatgag
caggaaaatgccctgcgggctggaggccttgagcacttaaatgaaagttga

>gi568815596f:62046414_62247253|GENSCAN_predicted_peptide_3|479_aa
MSVGRRRIKLLGILMMANVFIYFIMEVSKSSSQEKNGKGEVIIPKEKFWKISTPPEAYWN
REQEKLNRQYNPILSMLTNQTGEAGRLSNISHLNYCEPDLRVTSVVTGFNNLPDRFKDFL
LYLRCRNYSLLIDQPDKCAKKPFLLLAIKSLTPHFARRQAIRESWGQESNAGNQTVVRVF
LLGQTPPEDNHPDLSDMLKFESEKHQDILMWNYRDTFFNLSLKEVLFLRWVSTSCPDTEF
VFKGDDDVFVNTHHILNYLNSLSKTKAKDLFIGDVIHNAGPHRDKKLKYYIPEVVYSGLY
PPYAGGGGFLYSGHLALRLYHITDQVHLYPIDDVYTGMCLQKLGLVPEKHKGFRTFDIEE
KNKNNICSYVDLMSLFFMDFREHSLAAIGTFEDRPTCFRAAVNQEARAVATLAAAVKLLF
FWLGRAKKSSVLLISVWGWVEEEPTITQSVYVTVSDKFCKGKAVPCGVHFHTLSVISVQ

>gi568815596f:62046414_62247253|GENSCAN_predicted_CDS_3|1440_bp
atgagtgttggacgtcgaagaataaagttgttgggtatcctgatgatggcaaatgtcttc
atttattttattatggaagtctccaaaagcagtagccaagaaaaaaatggaaaaggggaa
gtaataatacccaaagagaagttctggaagatatctacccctcccgaggcatactggaac
cgagagcaagagaagctgaaccggcagtacaaccccatcctgagcatgctgaccaaccag
acgggggaggcgggcaggctctccaatataagccatctgaactactgcgaacctgacctg
agggtcacgtcggtggttacgggttttaacaacttgccggacagatttaaagactttctg
ctgtatttgagatgccgcaattattcactgcttatagatcagccggataagtgtgcaaag
aaacctttcttgttgctggcgattaagtccctcactccacattttgccagaaggcaagca
atccgggaatcctggggccaagaaagcaacgcagggaaccaaacggtggtgcgagtcttc
ctgctgggccagacacccccagaggacaaccaccccgacctttcagatatgctgaaattt
gagagtgagaagcaccaagacattcttatgtggaactacagagacactttcttcaacttg
tctctgaaggaagtgctgtttctcaggtgggtaagtacttcctgcccagacactgagttt
gttttcaagggcgatgacgatgtttttgtgaacacccatcacatcctgaattacttgaat
agtttatccaagaccaaagccaaagatctcttcataggtgatgtgatccacaatgctgga
cctcatcgggataagaagctgaagtactacatcccagaagttgtttactctggcctctac
ccaccctatgcagggggaggggggttcctctactccggccacctggccctgaggctgtac
catatcactgaccaggtccatctctaccccattgatgacgtttatactggaatgtgcctt
cagaaactcggcctcgttccagagaaacacaaaggcttcaggacatttgatatcgaggag
aaaaacaaaaataacatctgctcctatgtagatctgatgagcctgttcttcatggatttt
agggagcattccttagcagctattggaacctttgaggacagacctacctgcttccgagct
gcagtcaaccaggaggccagagctgtggctaccttggcagcagctgtgaagctgctgttt
ttctggctggggagggccaagaagagctccgttcttctcatcagcgtatggggttgggtg
gaggaggagcctactattactcaaagtgtttatgtgacagtaagtgataagttctgcaag
ggtaaggctgttccctgtggcgttcacttccacaccttgtccgtaataagtgtccaatag