GENSCAN 1.0	Date run:  5-Nov-116	Time: 05:01:54

Sequence gi568815596f:206059980_206262880 : 202901 bp : 42.84% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   3037   2820  218  1  2   43   82   195 0.241  12.61
 1.00 Prom -  10906  10867   40                              -3.45

 2.05 PlyA -  11458  11453    6                               1.05
 2.04 Term -  24052  23999   54  1  0  104   44    56 0.083  -0.62
 2.03 Intr -  25356  25340   17  1  2   96  111     9 0.124  -1.66
 2.02 Intr -  26063  25922  142  2  1   92  121    87 0.194  11.41
 2.01 Init -  52447  52346  102  1  0   28   86    76 0.037   1.69
 2.00 Prom -  53236  53197   40                              -7.35

 3.17 PlyA -  53368  53363    6                               1.05
 3.16 Term -  56300  56191  110  0  2   82   36   132 0.484   5.09
 3.15 Intr -  66632  66560   73  2  1   89   91    70 0.954   5.46
 3.14 Intr -  66865  66731  135  1  0   29   87   153 0.977   9.14
 3.13 Intr -  67993  67818  176  2  2   86   60   136 0.848   9.34
 3.12 Intr -  70263  70109  155  2  2   72  115    99 0.999   9.79
 3.11 Intr -  73126  72966  161  1  2   84   58   147 0.999   9.16
 3.10 Intr -  78635  78506  130  1  1   74   47   120 0.999   6.28
 3.09 Intr -  82090  81962  129  0  0   51   73   118 0.978   5.49
 3.08 Intr -  82852  82707  146  1  2   84   72   200 0.767  16.16
 3.07 Intr -  84153  84039  115  2  1   77   53    79 0.987   2.83
 3.06 Intr -  85047  84913  135  2  0   50   76   156 0.998   9.36
 3.05 Intr -  87109  86924  186  0  0  109   65   126 0.998  10.28
 3.04 Intr -  87682  87552  131  1  2   46   93   111 0.986   5.97
 3.03 Intr -  89946  89839  108  0  0  108   75   108 0.947  11.06
 3.02 Intr -  92531  92440   92  0  2   21   32   183 0.431   4.79
 3.01 Init -  93699  93639   61  0  1   32   89    21 0.334  -1.94
 3.00 Prom -  94591  94552   40                              -7.85

 4.00 Prom +  97645  97684   40                              -7.85
 4.01 Init +  97899  97931   33  2  0   95   76   -19 0.676  -2.46
 4.02 Intr +  99093  99302  210  2  0   66  -42   181 0.571   1.09
 4.03 Intr +  99355  99567  213  0  0   50   41   187 0.840   8.19
 4.04 Intr +  99980 100080  101  1  2   82   72   199 0.484  15.69
 4.05 Intr + 100609 100731  123  1  0   89   98    97 0.998   9.58
 4.06 Intr + 101367 101493  127  0  1  -13   64   236 0.933  10.86
 4.07 Intr + 102059 102125   67  1  1   88   56   103 0.994   4.66
 4.08 Intr + 102510 102635  126  1  0   78   84    98 0.954   8.13
 4.09 Term + 102750 102904  155  1  2   66   38   198 0.906   9.70
 4.10 PlyA + 102930 102935    6                               1.05

 5.09 PlyA - 104368 104363    6                               1.05
 5.08 Term - 110603 110389  215  0  2   58   49   131 0.310   2.61
 5.07 Intr - 114905 114818   88  2  1   53   92    62 0.016   1.72
 5.06 Intr - 117296 116264 1033  1  1   82   79   559 0.012  44.01
 5.05 Intr - 142916 142783  134  2  2  -37  121    67 0.036  -3.98
 5.04 Intr - 143742 143631  112  2  1   37   66   147 0.820   6.86
 5.03 Intr - 143969 143915   55  0  1   56  103    92 0.331   4.62
 5.02 Intr - 157931 157830  102  0  0   55  105   138 0.945  11.43
 5.01 Init - 176505 176376  130  0  1   61   90    78 0.366   5.66
 5.00 Prom - 179426 179387   40                              -7.65

 6.05 PlyA - 179558 179553    6                               1.05
 6.04 Term - 180294 180115  180  0  0  114   33   106 0.541   4.33
 6.03 Intr - 193655 193499  157  1  1   34   49   113 0.027   1.09
 6.02 Intr - 200025 199877  149  0  2   28   81   117 0.230   3.11
 6.01 Init - 202188 202120   69  0  0   77   76    49 0.815   3.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:206059980_206262880|GENSCAN_predicted_peptide_1|73_aa
MYEGKHIHFSEVDNKPLCSYSPKLCKQRRLNGYAFCIRHVLEDKTAPFKQCEYVAKYNSQ
RCTNPIPKSEDRS

>gi568815596f:206059980_206262880|GENSCAN_predicted_CDS_1|219_bp
atgtatgaagggaaacatatacacttctctgaggttgacaataagcccttgtgctcatat
agccccaaactgtgcaagcagaggcgactcaacggctacgccttctgtatcagacacgtt
ctggaggacaagactgcccccttcaagcaatgtgaatatgtggccaagtataacagccaa
cgctgcaccaaccccatccccaaatcagaggatcgtagn

>gi568815596f:206059980_206262880|GENSCAN_predicted_peptide_2|104_aa
MGLPSRKDLPVAYSASQPLVSWTSYRVAQGSKGKGKALAGAQGGAVAAAAELPSPLPAPL
TLICQPSRGNRGEGEKKKQLKDGPQIPGQDVSRGYAYLLVVLEC

>gi568815596f:206059980_206262880|GENSCAN_predicted_CDS_2|315_bp
atgggattgccttccagaaaggatcttcctgtggcctattcagcaagtcagcctctggtt
agttggacttcttatagggtagctcaaggctccaagggcaagggaaaggctctcgccgga
gcccaggggggagcagtagcagcggcagccgagcttcctagtccattgccagcgcctctc
actctgatctgtcagcccagccgagggaacaggggggaaggagaaaaaaaaaagcagctg
aaagacggcccccagattccgggacaggatgtttcccgtggctatgcttacctccttgtt
gttcttgagtgttga

>gi568815596f:206059980_206262880|GENSCAN_predicted_peptide_3|680_aa
MLRIPVRKALVGLSKSPKGCVRTTATAASNLIEVFVDGQSVMVEPGTTVLQACEKVGMQI
PRFCYHERLSVAGNCRMCLVEIEKAPKDQSMMFGNDRSRFLEGKRAVEDKNIGPLVKTIM
TRCIQCTRCIRFASEIAGVDDLGTTGRGNDMQVGTYIEKMFMSELSGNIIDICPVGALTS
KPYAFTARPWETRKTESIDVMDAVGSNIVVSTRTGEVMRILPRMHEDINEEWISDKTRFA
YDGLKRQRLTEPMVRNEKGLLTYTSWEDALSRVAGMLQSFQGKDVAAIAGGLVDAEALVA
LKDLLNRVDSDTLCTEEVFPTAGAGTDLRSNYLLNTTIAGVEEADVVLLVGTNPRFEAPL
FNARIRKSWLHNDLKVALIGSPVDLTYTYDHLGDSPKILQDIASGSHPFSQVLKEAKKPM
VVLGSSALQRNDGAAILAAVSSIAQKIRMTSGVTGDWKVMNILHRIASQVAALDLGYKPG
VEAIRKNPPKVLFLLGADGGCITRQDLPKDCFIIYQGHHGDVGAPIADVILPGAAYTEKS
ATYVNTEGRAQQTKVAVTPPGLAREDWKIIRALSEIAGMTLPYDTLDQVRNRLEEVSPNL
VRYDDIEGANYFQQANELSKLVNQQLLADPLVPPQLTIKDFYMTGEVTEINEALAENPGL
VNKSRYEDGWLIKMTLSNPS

>gi568815596f:206059980_206262880|GENSCAN_predicted_CDS_3|2043_bp
atgttaaggatacctgtaagaaaggccttagtaggcctttctaagtctcctaaaggatgt
gttcgaacaactgccacagcagcaagcaacttgattgaagtatttgttgatggtcagtct
gtcatggtggaaccgggaacgaccgtcctccaagcttgtgagaaggttggcatgcagatc
cctcgattctgttatcatgaaaggttgtctgttgctggaaactgcaggatgtgccttgtt
gaaattgagaaagcccctaaggaccagtccatgatgtttggaaatgataggagccgattt
ttagaggggaagcgtgctgtggaagacaagaacattgggccattggtaaagaccatcatg
acaagatgtatacagtgtactcgctgcatcaggtttgcaagtgagattgcaggagtagat
gatttgggaacaacaggcagaggaaatgatatgcaagttggcacatacattgaaaagatg
ttcatgtctgaactgtctgggaatatcattgatatctgccctgtaggtgccctaacctct
aagccctatgcctttactgcccggccttgggaaacaagaaagacagaatccattgatgta
atggatgcggttggaagtaatattgtggttagcacaagaactggagaagtgatgaggatt
ttgccacgtatgcatgaggacatcaatgaagagtggatctctgataaaaccagatttgcc
tatgatgggctaaaacgtcaaagacttaccgagccaatggtcagaaatgaaaaagggctt
ttaacctatacttcttgggaggatgcgctctctcgcgtagctggaatgttgcagagtttt
caaggcaaagatgtggcagcaattgcaggtggcttggtggatgctgaagccctggtagct
ctcaaagatttgcttaatagagtggactctgacaccttatgcactgaagaggtcttcccc
actgcaggagctggcacagatttgcgttccaattatcttcttaatactacaattgctggt
gtggaagaggcagatgttgttcttctggttggtacaaacccacgttttgaggcaccactg
tttaatgctagaattcgaaagagctggctgcataatgacttaaaagtggcccttataggc
agtccagtggacctcacttacacatatgaccacctgggagactcccccaaaattcttcaa
gacattgcttcgggaagccatccatttagccaggtcctaaaggaagctaaaaaaccaatg
gtggttttaggcagttctgcactccaaagaaatgatggagcagcaattcttgcagctgtt
tctagcattgcacaaaagattcggatgactagtggtgttactggtgattggaaagttatg
aatatccttcataggattgcaagtcaagtagctgctttggaccttggctataagcctggg
gtggaagcaattcggaagaaccctcccaaggtgctgtttctcctgggagcagatggaggt
tgtatcacacgacaggatttgccaaaggattgtttcattatttatcaaggacatcatggt
gatgttggggctcccatagctgatgttattctcccaggagctgcttacacagagaagtct
gctacatatgtcaacactgagggtagagctcagcagactaaggtagcagtgacacctcct
ggcttggcaagagaagactggaaaattataagagcactctctgagattgctggaatgact
cttccatatgatactctggatcaagtaaggaacagattggaagaagtctctcctaatctt
gttcgatatgatgatattgaaggggctaattacttccagcaagcaaatgagctctcaaag
ctagtgaaccagcagcttcttgctgacccacttgttccacctcagctaactataaaagac
ttctacatgacaggagaagtaaccgaaattaatgaagctcttgcagaaaatccaggactt
gtaaacaaatctcgttatgaagatggttggctgatcaagatgacactgagtaacccttca
taa

>gi568815596f:206059980_206262880|GENSCAN_predicted_peptide_4|384_aa
MDPSIYFLPSKREGHLQAYIRDSVPEDPLILIFFSASSDQRPWLKAPHLPALRGFRGGGA
GGGAQSRTTEDYVAWAKGNSPTSPSPRSRGGCSAKLSGPRRPPRRPGRLFNMAASANSVS
RAWRTESPEGLESLHSTSLSAISVSRPEGGAELSDTADTMGFGDLKSPAGLQVLNDYLAD
KSYIEGYVPSQADVAVFEAVSSPPPADLCHALRWYNHIKSYEKEKASLPGVKKALGKYGP
ADVEDTTGSGATDSKDDDDIDLFGSDDEEESEEAKRLREERLAQYESKKAKKPALVAKSS
ILLDVKPWDDETDMAKLEECVRSIQADGLVWGSSKLVPVGYGIKKLQIQCVVEDDKVGTD
MLEEQITAFEDYVQSMDVAAFNKI

>gi568815596f:206059980_206262880|GENSCAN_predicted_CDS_4|1155_bp
atggatccatccatttacttcttgccttccaagagggaaggtcacctgcaagcctacatt
cgtgacagcgttcccgaggaccccctgatcctcatcttcttttctgcttcatcagaccag
agaccgtggctaaaagccccccatctgccggctctcaggggcttccgaggcggcggggcg
ggaggcggcgcccagtcaaggacaacagaagactacgtcgcgtgggccaaaggaaacagt
cccacctcaccttctccccggagccgcggaggctgttctgctaaactgtctggaccacga
cgaccccctaggaggccgggtcgcttattcaatatggcggcctcggctaactctgtcagc
cgggcctggagaacggaaagcccggagggactagaatccttgcattcgacaagtttgtcg
gcaatttccgtcagccgaccagagggcggagctgagctctcggatacagccgacaccatg
ggtttcggagacctgaaaagccctgccggcctccaggtgctcaacgattacctggcggac
aagagctacatcgaggggtatgtgccatcacaagcagatgtggcagtatttgaagccgtg
tccagcccaccgcctgccgacttgtgtcatgccctacgttggtataatcacatcaagtct
tacgaaaaggaaaaggccagcctgccaggagtgaagaaagctttgggcaaatatggtcct
gccgatgtggaagacactacaggaagtggagctacagatagtaaagatgatgatgacatt
gacctctttggatctgatgatgaggaggaaagtgaagaagcaaagaggctaagggaagaa
cgtcttgcacaatatgaatcaaagaaagccaaaaaacctgcacttgttgccaagtcttcc
atcttactagatgtgaaaccttgggatgatgagacagatatggcgaaattagaggagtgc
gtcagaagcattcaagcagacggcttagtctggggctcatctaaactagttccagtggga
tacggaattaagaaacttcaaatacagtgtgtagttgaagatgataaagttggaacagat
atgctggaggagcagatcactgcttttgaggactatgtgcagtccatggatgtggctgct
ttcaacaagatctaa

>gi568815596f:206059980_206262880|GENSCAN_predicted_peptide_5|622_aa
MSVHRGEVPCTGTTASPLEEATLSELKTVLKSFLSQSQVLKLEEKSLNHKDSDRAQSPEN
FGHALSRSSHRHRQLQRVPYIIDEGTGADCTKTLICSLDQIGELGKMAYLQDCRFTTRAR
TQEEPDGSDARDKERKRAGVGTVDGGVTGFEGLAAAEVHSATCTETLRGAEFSSFVVRFL
HSPFSKVMEDLEETLFEEFENYSYDLDYYSLESDLEEKVQLGVVHWVSLVLYCLAFVLGI
PGNAIVIWFTGFKWKKTVTTLWFLNLAIADFIFLLFLPLYISYVAMNFHWPFGIWLCKAN
SFTAQLNMFASVFFLTVISLDHYIHLIHPVLSHRHRTLKNSLIVIIFIWLLASLIGGPAL
YFRDTVEFNNHTLCYNNFQKHDPDLTLIRHHVLTWVKFIIGYLFPLLTMSICYLCLIFKV
KKRSILISSRHFWTILVVVVAFVVCWTPYHLFSIWELTIHHNSYSHHVMQAGIPLSTGLA
FLNSCLNPILYVLISKKFQARFRSSVAEILKYTLWEVSCSGTGRQTSNVATQGSKRPRWK
FLVLLKAMTGTAMWNCESNSTSFFCKLPSLRYVFISSAKTDKYSKLAPVEWVTVEKVPEN
VEVTLELGNRQRLEQFGGLRRR

>gi568815596f:206059980_206262880|GENSCAN_predicted_CDS_5|1869_bp
atgagtgtccaccgtggagaggtaccttgcacagggaccactgcatctcctttagaggaa
gccacactctctgaattaaaaacagtcctgaagagcttcctaagtcaaagccaagtattg
aaattggaggagaaatcattaaaccacaaggattcagacagagcccagagccctgaaaac
tttggccacgcactttcccgcagcagccacaggcaccggcaacttcagagagttccctat
atcatcgatgaaggaacaggagctgattgtaccaaaacacttatatgttcgctagatcag
atcggagaactcgggaaaatggcgtacttacaagactgcaggtttactacaagggccaga
actcaggaagagccggatggaagcgatgcacgggacaaggaaaggaaacgcgctggagtg
ggtacagtggatggaggggtgacaggctttgaggggctggcagcagctgaggtccacagt
gccacgtgtaccgagacactgagaggagcagagttctcctcttttgtagtaagatttctt
cattctccatttagcaaggtcatggaagatttggaggaaacattatttgaagaatttgaa
aactattcctatgacctagactattactctctggagtctgatttggaggagaaagtccag
ctgggagttgttcactgggtctccctggtgttatattgtttggcttttgttctgggaatt
ccaggaaatgccatcgtcatttggttcacggggttcaagtggaagaagacagtcaccact
ctgtggttcctcaatctagccattgcggatttcatttttcttctctttctgcccctgtac
atctcctatgtggccatgaatttccactggccctttggcatctggctgtgcaaagccaat
tccttcactgcccagttgaacatgtttgccagtgtttttttcctgacagtgatcagcctg
gaccactatatccacttgatccatcctgtcttatctcatcggcatcgaaccctcaagaac
tctctgattgtcattatattcatctggcttttggcttctctaattggcggtcctgccctg
tacttccgggacactgtggagttcaataatcatactctttgctataacaattttcagaag
catgatcctgacctcactttgatcaggcaccatgttctgacttgggtgaaatttatcatt
ggctatctcttccctttgctaacaatgagtatttgctacttgtgtctcatcttcaaggtg
aagaagcgaagcatcctgatctccagtaggcatttctggacaattctggttgtggttgtg
gcctttgtggtttgctggactccttatcacctgtttagcatttgggagctcaccattcac
cacaatagctattcccaccatgtgatgcaggctggaatccccctctccactggtttggca
ttcctcaatagttgcttgaaccccatcctttatgtcctaattagtaagaagttccaagct
cgcttccggtcctcagttgctgagatactcaagtacacactgtgggaagtcagctgttct
ggcacaggtcgccagacttctaatgtggcaactcagggctccaagaggccaaggtggaaa
tttctagtcctgttaaaggctatgactggcacagctatgtggaactgtgagtccaactca
acctctttcttttgtaaattgcccagtctcaggtatgtctttatcagcagcgcgaaaaca
gacaaatacagcaaattggcaccagtagagtgggtcactgttgaaaaggtacctgaaaat
gtggaagtgacattggaactgggtaacaggcagaggttggaacaatttggagggctcaga
agaagatag

>gi568815596f:206059980_206262880|GENSCAN_predicted_peptide_6|184_aa
MYELQTLVQQYKGSISKESENTKWPGSTASRSLSVLEVCRHQYPQTPSLLPRCPRASSPQ
LKGQRRKSRSEDCLKMGNWKSLSPQGATVESAAYGSAGGSKSCRVPPAVLHAIECCERFQ
DRKTGGCGRAAVPQSPRRTTDQSIALTLGKGLFMGDRKVQILVEEPAVVPGIEPISQAWR
NKRK

>gi568815596f:206059980_206262880|GENSCAN_predicted_CDS_6|555_bp
atgtatgagcttcagacattagtccaacagtataaaggtagcatttccaaagaatcggaa
aacacaaagtggccaggcagcaccgcttcaagaagtctctccgtgcttgaagtctgcagg
caccagtaccctcagacgccctccctcctgccaagatgccctagagcaagttccccgcag
ctgaaggggcagcgaaggaagagccgaagtgaagactgcctaaagatggggaactggaaa
agtttgagtccccagggagctaccgtggagagtgctgcatacggtagcgcaggcggctcc
aagtcgtgtagagtgccgccggcggtattacatgcaatagagtgctgcgaacggttccaa
gacaggaagaccgggggatgtgggagggcagcagtcccccaatccccaagacggaccaca
gaccaaagcattgctctgaccctaggaaagggcctgtttatgggtgacaggaaggttcag
atcctagtggaggaaccagcagtagtgcctggaatagagcccatatcccaggcatggagg
aacaagaggaagtag