GENSCAN 1.0	Date run:  4-Nov-116	Time: 09:43:51

Sequence gi568815596f:200963089_201164048 : 200960 bp : 41.60% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.11 Intr -    607    402  206  2  2   61  101   202 0.000  16.80
 1.10 Intr -    881    759  123  0  0    4  116   100 0.000   4.04
 1.09 Intr -  18783  18268  516  1  0   84   98   563 0.360  48.90
 1.08 Intr -  24444  24277  168  1  0   33   53   165 0.983   6.50
 1.07 Intr -  25333  25174  160  1  1   60  113   158 0.925  14.14
 1.06 Intr -  29280  29193   88  2  1   72  111    69 0.204   6.65
 1.05 Intr -  29915  29799  117  1  0   31  103    90 0.067   3.46
 1.04 Intr -  46000  45885  116  1  2   64   52    48 0.022  -2.87
 1.03 Intr -  54082  53903  180  1  0   95  111    66 0.904   8.74
 1.02 Intr -  59844  59743  102  0  0   83   75   114 0.994   9.05
 1.01 Init -  60921  60871   51  0  0   52   94    45 0.994   2.71
 1.00 Prom -  66494  66455   40                              -5.25

 2.02 PlyA -  67140  67135    6                               1.05
 2.01 Sngl -  72634  71942  693  1  0   88   49   619 0.998  53.95
 2.00 Prom -  81550  81511   40                              -6.65

 3.00 Prom +  88006  88045   40                              -3.75
 3.01 Sngl + 100001 100906  906  1  0   83   45  1029 0.982  94.08
 3.02 PlyA + 101280 101285    6                               1.05

 4.00 Prom + 104376 104415   40                              -6.95
 4.01 Init + 104525 104531    7  1  1   77  103     0 0.483   1.64
 4.02 Intr + 108359 108609  251  0  2   50   72   274 0.728  18.23
 4.03 Term + 108837 108905   69  2  0   69   48   119 0.975   2.96
 4.04 PlyA + 109755 109760    6                               1.05

 5.00 Prom + 113258 113297   40                              -6.75
 5.01 Init + 115795 115934  140  0  2   99  111    86 0.983  11.66
 5.02 Term + 122371 122527  157  1  1  118   49    75 0.992   3.02
 5.03 PlyA + 123682 123687    6                               1.05

 6.03 PlyA - 124514 124509    6                               1.05
 6.02 Term - 154029 153530  500  1  2   73   55   327 0.178  21.60
 6.01 Init - 155981 155660  322  2  1   94   39   307 0.575  23.94
 6.00 Prom - 158551 158512   40                              -6.95

 7.00 Prom + 165550 165589   40                              -6.75
 7.01 Init + 166778 167058  281  1  2   37   59   309 0.980  19.43
 7.02 Intr + 169941 170046  106  0  1   92  113    73 0.994   9.50
 7.03 Intr + 172884 173019  136  2  1   53   99   142 0.722  11.02
 7.04 Term + 173110 173339  230  2  2   89   46    38 0.701  -4.49
 7.05 PlyA + 173484 173489    6                              -3.44

 8.06 PlyA - 173736 173731    6                               1.05
 8.05 Term - 175006 174428  579  1  0   22   55   777 0.980  61.30
 8.04 Intr - 175287 175180  108  0  0  -11   96   120 0.464   2.46
 8.03 Intr - 175783 175508  276  1  0   18   56   229 0.378   9.49
 8.02 Intr - 175951 175825  127  0  1   92   28   103 0.536   4.46
 8.01 Init - 177096 176873  224  0  2   64   47   175 0.736   7.10
 8.00 Prom - 177695 177656   40                              -7.65

 9.00 Prom + 179214 179253   40                              -6.25
 9.01 Init + 182297 182344   48  1  0   62   74    36 0.061   0.60
 9.02 Intr + 186666 186747   82  2  1   97   96    55 0.316   5.49
 9.03 Intr + 197344 197854  511  2  1  103  105   403 0.783  34.60
 9.04 Term + 200747 200885  139  2  1  105   48   137 0.819   7.85

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +    408    542  135  0  0   78   94   159 0.886  14.26
S.002 Term +    616    841  226  1  1   55   48   190 0.997   6.97
S.003 Sngl +  63022  63702  681  0  0   63   39   205 0.949   9.03


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_1|609_aa
MLGTDRCVVEEWLSEFKALPDTQITSYAATLHRKKTLVPALYKVIQDSNNELLEPVCHQL
FELYRSSEVRLKRFTLQFLPELMWVYLRLTVSRDRQSNGCIEALLLGIYNLPSTIGSMAL
TEGALCQHDLIRVVYSDLHPQRETFTAQNRVCVSGFPRQHEKHWKELCGRIVLDPEFMVQ
LLTGVYYAMYNGQWDLGQEVLDDIIYRAQLELFSQPLLVANAMKNSLPFDAPDSTQEGQK
VLKVEVTPTVPRISRTAITTASIRRHRWRREDGFDFSNEADSSIPGSPIQHGSTDLGIKR
VQEGEVLVRRTPEHGSPEPNSATATTEGAEGVNGGEESVNLNDADEGFSSGASLSSQPIG
TKPSSSSQRGSLRKVATGRSAKDKETASAIKSSESPRDSVVRKQYVQQPTDLSVDSVELT
PMKKHLSLPAGQVVPKINSLSLIRTASASSSKSFDYVNGSQASTSIGVGTEGGTNLAANN
ANRYSTVSLQEDRLGQAGEEHFLKIATRQTATTQPATVQTSSDPNNTSFSLPRKRKEERK
GREIRCAARRLPIPQLASGAPYLPGGRARITGNWLFPLGPKVPSLRRRLSGVSFGRRDAA
GSAPDGNLA

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_1|1827_bp
atgctgggaactgaccgttgtgttgtggaagaatggttatcagaattcaaggcattacct
gacactcagatcaccagttatgcagcaactttacaccggaaaaaaacacttgtaccagcc
ctctataaagttattcaagattcaaataatgagctcctggagcctgtctgccatcagctg
tttgagctctatcgtagctcagaggttcgacttaagaggttcacactgcagttcttgcca
gaattgatgtgggtttatttacggcttacagttagccgagacagacagagtaatggttgc
attgaagcacttctgttaggaatttacaatttgccttcaacaattggatccatggctttg
acagaaggggcattgtgtcagcatgatctcatcagagttgtttatagtgatcttcatcct
cagagggaaacattcactgcacagaaccgggtttgtgtgagtggctttccacggcaacat
gaaaaacactggaaagaactctgtggtcgaatagtattggatcctgaatttatggtgcaa
cttctcacaggggtttattatgccatgtataatggacagtgggaccttggccaggaagtt
cttgatgatatcatttatagagcccagctagagcttttttctcaaccactattggttgcc
aatgccatgaaaaactcattaccatttgatgctcctgattctacacaagaaggccagaaa
gtccttaaagttgaagtcactccaacagtgccgaggatttctcggactgcaattacaaca
gcttcaatccgtcgtcatagatggagaagagaagatggctttgacttctcaaacgaggct
gactcgagtattcctggctccccgatccaacacggctccactgacctagggatcaaacgt
gtgcaagagggggaggtgctggtgcgcaggacccctgagcatggctcgccggagcccaac
tcagcaacagccacaacagagggtgctgagggtgtaaatggaggagaggagtctgtaaac
ctgaatgatgcagatgaaggattttcatcaggggcttccctcagcagtcagccaattggg
accaaaccatcctcctcttctcagaggggaagcttaaggaaagtagcaactgggcgttca
gccaaggataaagaaacagcctctgccatcaaatccagtgagagccctcgagattcagta
gttcgcaagcagtatgtacagcaaccaactgatcttagtgtagattcagttgagctgaca
ccaatgaagaaacacctgagcctgcctgctggccaggtggtgccaaaaatcaatagctta
agtctaatccggacagccagtgcttcctcaagtaaatcatttgactatgtaaatggcagt
caagcaagtaccagcattggggttggcactgagggaggtactaatttagcagccaacaat
gctaatcgatactcaactgtcagtctgcaggaagaccggctaggtcaagctggcgaagaa
cactttttaaagattgctacaagacaaacagctaccactcagccagctactgtgcaaact
tcctcagatccaaacaacacttccttttcccttccccggaaacggaaagaagaaaggaaa
gggcgggagattcggtgtgccgcacgcaggcttcccatcccccagctggcctccggtgct
ccttacctccccggtggtcgggcgcgaattactggaaattggcttttcccgttggggccg
aaggtaccttccctgcggcggcgactcagcggggtgtcgttcggccggcgtgacgcagcc
ggatcggcgccagacggaaacctagcg

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_2|230_aa
MGKKQSRKTENSKNQSTSPPPKERSSSPAMEQSWTENDFDELREEGFRRSDYSELKEEVR
TRGKEVKNLEKRLDEWLTRITNAEKSLKDLMELKTTARERRDECTSLSSRFNQLEERVSV
MEDEMNEMKRKEKFREKRIKRNEQSLQEIWDYMKRPNLRLIGVPESDGENGTKLENTLQE
IIQENFPNLARQANIQIQEIQRTPQRYSSRGATPRHIIVRFTKVEMKEKM

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_2|693_bp
atggggaaaaaacagagcagaaaaactgaaaattctaaaaatcagagcacctctcctcct
ccaaaggaacgcagctcctcaccagcaatggaacaaagctggacggagaatgactttgat
gagttgagagaagaaggcttcagacgatcagactactccgagctaaaggaggaagttcga
acccgtggcaaagaagttaaaaaccttgaaaaaagattagatgaatggctaactagaata
accaatgcagagaagtccttaaaggacctgatggagctgaaaaccacggcacgagaacga
cgtgacgaatgcacaagcctcagtagccgattcaatcaactggaagaaagggtatcagtg
atggaagatgaaatgaatgaaatgaagcgaaaagagaagtttagagaaaaaagaataaaa
agaaacgaacaaagcctccaagaaatatgggactatatgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgacggggagaatggaaccaagttggaaaacactctgcaggag
attatccaggagaacttccccaatctagcaaggcaggccaacattcaaattcaggaaata
cagagaacgccacaaagatactcctcaagaggagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgtga

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_3|301_aa
MSKSESPKEPEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKCSTGFGFV
TYATVKEVEAAMNARPQKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHH
LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKA
LSKQEMTSASSSQRGRSGSGNFGGGRGGGFSGNDNFGHGRNFSGHGGFGGSRGGGGYDGS
GDGYNGFGNDGSHFGGGGSYNDFGNYKNQSSNFGPVKGGNFGGRSSGPYGGGGQYFAKPR
N

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_3|906_bp
atgtctaagtcagagtctcctaaagagcccgaacagctgaggaagctcttcattggaggg
ttgagctttgaaacaaccgatgagagcctgaggagccattttgagcaacggggaacgctc
acagactgtgtggtaatgagagatccaaacaccaagtgctccacgggctttgggtttgtc
acatatgccactgtgaaggaggtggaggcagctatgaatgcaaggccacagaaggtggat
ggaagagtcgtggaaccaaagagagctgtctcgagagaagattctcaaagaccaggtgcc
cacttaactgtgaaaaagatatttgttggtggcattaaagaagacactgaagaacatcac
ctaagagattattttgaacagtatggaaaaattgaagtgattgaaatcatgactgaccga
ggcagtgggaagaaaaggggctttgcctttgtaacctttgatgaccatgactccgtggat
aagattgtcattcagaaataccacactgtgaatggccacaactgtgaagttagaaaagcc
ctgtcaaagcaagagatgactagtgcttcatctagccaaagaggtcgaagtggttctgga
aactttggtggtggtcgtggaggtggtttcagtgggaatgacaactttggtcatggaaga
aacttcagtggtcatggtggctttggtggcagccgtggtggtggtggatatgatggcagt
ggggatggctataatggatttggtaatgatggaagccattttggaggtggtggaagctac
aatgattttggcaattacaaaaatcagtcttcaaattttggacccgtgaagggaggaaat
tttggaggcagaagctctggcccctatggcggtggaggccaatactttgcaaaaccacga
aactaa

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_4|108_aa
MNHATWFTRGSGTTNTPATAFPDHPRQLPSVVSAAEGEENPSSSSTLPPPKTAPPPTCHP
AVSGFLPPPPPAAACQLQRNNQPSHWESLTQYRNVKRLLRFPAVRNSR

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_4|327_bp
atgaaccatgctacctggtttacgagaggttccgggaccaccaacacaccggctaccgcc
tttccagaccaccctcgccagctcccgtctgtagtttccgcggccgaaggagaagaaaac
ccctcttcatctagcactttgcctcccccaaagacagcaccgccgcctacctgtcaccct
gctgtctccggcttcctaccgccgccgcctcccgcagcagcctgccaactgcagcgcaac
aaccaaccctctcattgggaatctctaacccagtatcggaacgttaagcggcttctccgc
tttcctgccgtgagaaactcgaggtga

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_5|98_aa
MAHEHGHEHGHHKMELPDYRQWKIEGTPLETIQKKLAAKGLRDPWGRNEAWRYMGGFAKS
VSFSDVFFKGFKWGFAAFVVAVGAEYYLESLNKDKKHH

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_5|297_bp
atggcccatgaacatggacatgagcatggacatcataaaatggaacttccagattataga
caatggaagatagaagggacaccattagaaactatccagaagaagctggctgcaaaaggg
ctaagggatccatggggccgcaatgaagcttggagatacatgggtggctttgcaaagagt
gtttccttttctgatgtattctttaaaggattcaaatggggatttgctgcatttgtggta
gctgtaggagctgaatattacctggagtccctgaataaagataagaagcatcactga

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_6|273_aa
MPRSVVSPLEAQGDLGPKARTQSFSASIGGQCPDVPGAQGDTSPGAGIGQDSRSTHARAA
AGSSHWISAGTNSHPRRTSSDLLLRKTRIGNAPDGTRNKDRKSKASTGRRLPLSEIERIH
NCWESPRSQQLSKGKMPDLLNSSPQELNSQDHFKQSLHDAEGPPLKLAGGPLGLRLQGAA
RVGQGLLPVSQVHRGAACTAVAQVAPFWESGAELRVEGVRGFGAGRKRKRGHSAKPAVNN
RDKEPTKLSQVPEAPPPSPGHCRPPAVSRSAGL

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_6|822_bp
atgccccggagtgttgtgagtcctctggaggctcaaggagacctagggccaaaagcgagg
actcaatccttttctgccagtatcgggggacagtgccccgacgtcccaggagcccagggc
gacaccagcccaggggcggggatcgggcaggattctcggtctactcacgcccgggcagcc
gccggctcttcccactggatctccgccgggaccaactcccaccctcgccggacaagctca
gacctgctgctccgcaaaaccagaattggaaatgctccagatgggacgaggaacaaggac
agaaagtcaaaagcatcaacagggcggcggctcccactgagtgagatcgagcgcatacac
aattgttgggaaagtccacgttcccaacaactttcgaaaggaaaaatgccagatcttctc
aacagttcaccccaagaattgaactctcaagatcattttaagcaaagtttacacgacgct
gagggcccgccactgaagctcgcgggtgggcctctggggctgcggctgcagggggcggcc
agagttggccaagggttacttccggtctctcaggtccatcggggtgcagcttgtaccgct
gtggcccaggtcgcccctttctgggaatccggggcggagttgcgggtagaaggggttcgg
gggttcggagccgggcggaaacggaagcgggggcattccgcaaagcccgcggtaaacaac
cgagataaggaacctacaaaactgagtcaggttccagaagcgcccccgccatcccctggc
cactgccggccacctgcagtttcccggagcgcagggctgtga

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_7|250_aa
MSAEVIHQVEEALDTDEKEMLLFLCRDVAIDVVPPNVRDLLDILRERGKLSVGDLAELLY
RVRRFDLLKRILKMDRKAVETHLLRNPHLVSDYRVLMAEIGEDLDKSDVSSLIFLMKDYM
GRGKISKEKSFLDLVVELEKLNLVAPDQLDLLEKCLKNIHRIDLKTKIQKYKQSGGWNGT
WMTKASFSLWLEIASLYILHIPDLPTPLPCIFMISAKCCQAVLNISVFKKESGICTGWQS
YGHSGVLHVC

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_7|753_bp
atgtctgctgaagtcatccatcaggttgaagaagcacttgatacagatgagaaggagatg
ctgctctttttgtgccgggatgttgctatagatgtggttccacctaatgtcagggacctt
ctggatattttacgggaaagaggtaagctgtctgtcggggacttggctgaactgctctac
agagtgaggcgatttgacctgctcaaacgtatcttgaagatggacagaaaagctgtggag
acccacctgctcaggaaccctcaccttgtttcggactatagagtgctgatggcagagatt
ggtgaggatttggataaatctgatgtgtcctcattaattttcctcatgaaggattacatg
ggccgaggcaagataagcaaggagaagagtttcttggaccttgtggttgagttggagaaa
ctaaatctggttgccccagatcaactggatttattagaaaaatgcctaaagaacatccac
agaatagacctgaagacaaaaatccagaagtacaagcagtctggtggatggaatggaacc
tggatgaccaaagcctcctttagcttgtggctagaaatcgcgtccctttatattcttcat
atcccagatctgccaactccattgccctgtatattcatgatctctgcaaaatgctgccaa
gcagttcttaacatttcagtcttcaagaaagaatctgggatctgcacaggctggcagagc
tatggacattcaggggttttgcatgtatgctga

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_8|437_aa
MEYRAPWPAPPLPQPPPPAHPAHPAPGCSVAAARLRVAAAAAFMSGRGVSRQHEGLPISS
STGYVVEDGFTALKGHSNNLISLSFPHTVQQLFASDQGLTYNDFLILPGFIDFIADETPL
ISSPMDTVTEADLAIVMALMGGTGFIHHNCTPEFQASEVQKVKKFEPGFITHPVVLSPLH
TVGDVLEAKMRHGFSGIPITETGTMGSKLNRDYPVASKDSHEQLLGGAAVGTHEDDKYHL
DLLTQGHGLRGSIYINQEVIACSQPQGTAVYKVAKHTQNFGVPIIADGGIQTMGHVVKAL
ALGASTVMMGSLLAATMEAPGECFFSDGMQLKKYQGMGSLDAMEKSSSSQKQYFNDGDKA
KITQDVLGSIQDKGSIQKFVPYLIVGIQHGCQDIGAHSLSVLRSMMYSGELKFEKQTMSA
QIDGGIHGLHSYEKWLY

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_8|1314_bp
atggagtatagggcgccctggcccgccccgccgctgccgcagcccccgcccccagcccac
ccagcccacccggcgcctggctgcagcgtggcagcggcgcgcctccgcgtcgcagcagct
gcagcgtttatgtcgggtcgcggggtctcgcggcagcatgagggactacctatcagcagc
agcaccggctacgtggtcgaggacgggttcactgcgctgaagggacacagtaacaatctg
atctctctttcttttccccacaccgtgcagcagctcttcgccagtgaccagggactcacc
tacaacgacttcttgattctcccaggattcatagacttcatagctgatgagacgccgctg
atctcctcccccatggacactgtgacagaggccgacctggccatcgtgatggctctgatg
ggaggtactggtttcattcaccacaactgcaccccagagttccaggccagtgaggtgcag
aaggtcaagaagtttgaaccgggctttatcacacaccccgtggtgctgagccccttgcac
actgtgggtgatgtgttggaggccaagatgcgtcatggcttctctggcatccccatcact
gagacgggtaccatgggcagcaagctgaaccgagactaccctgtggcctccaaggattcc
catgagcagctgctgggcggggcagctgtgggtacccatgaggatgacaaataccacctg
gacctgctcacccaggggcatggactgcgcggctccatctacatcaaccaggaagtgata
gcctgcagtcagccccagggcactgctgtgtacaaggtggccaagcatacccagaacttt
ggtgtgcccatcatagccgatggtggcatccagaccatggggcatgtggtcaaggccctg
gccctaggagcctccacagtgatgatgggctccctgctggccgccaccatggaggccccc
ggcgagtgcttcttctcagacggaatgcagctcaagaagtaccagggcatgggctcactg
gatgccatggagaagagcagcagcagccagaaacaatacttcaacgacggggataaggcg
aagatcacgcaggatgtcttgggctccatccaggacaaagggtccattcagaagttcgtg
ccctacctcatagtgggcatccagcatggctgccaggatatcggggcccacagcctgtct
gtccttcggtccatgatgtactcaggggagctcaagtttgagaagcagaccatgtcagcc
cagatcgacggtggcatccatggcctgcactcttacgagaagtggctgtactga

>gi568815596f:200963089_201164048|GENSCAN_predicted_peptide_9|259_aa
MGEVKNKDLRNSLALNSIPEERYKMKSKPLGICLIIDCIGNETELLRDTFTSLGYEVQKF
LHLSMHGISQILGQFACMPEHRDYDSFVCVLVSRGGSQSVYGVDQTHSGLPLHHIRRMFM
GDSCPYLAGKPKMFFIQNYVVSEGQLEDSSLLEVDGPAMKNVEFKAQKRGLCTVHREADF
FWSLCTADMSLLEQSHSSPSLYLQCLSQKLRQERKRPLLDLHIELNGYMYDWNSRVSAKE
KYYVWLQHTLRKKLILSYT

>gi568815596f:200963089_201164048|GENSCAN_predicted_CDS_9|780_bp
atgggagaagtaaagaacaaagacttaaggaacagcttggcgctcaacagcatacctgaa
gagagatacaagatgaagagcaagcccctaggaatctgcctgataatcgattgcattggc
aatgagacagagcttcttcgagacaccttcacttccctgggctatgaagtccagaaattc
ttgcatctcagtatgcatggtatatcccagattcttggccaatttgcctgtatgcccgag
caccgagactacgacagctttgtgtgtgtcctggtgagccgaggaggctcccagagtgtg
tatggtgtggatcagactcactcagggctccccctgcatcacatcaggaggatgttcatg
ggagattcatgcccttatctagcagggaagccaaagatgttttttattcagaactatgtg
gtgtcagagggccagctggaggacagcagcctcttggaggtggatgggccagcgatgaag
aatgtggaattcaaggctcagaagcgagggctgtgcacagttcaccgagaagctgacttc
ttctggagcctgtgtactgcggacatgtccctgctggagcagtctcacagctcaccatcc
ctgtacctgcagtgcctctcccagaaactgagacaagaaagaaaacgcccactcctggat
cttcacattgaactcaatggctacatgtatgattggaacagcagagtttctgccaaggag
aaatattatgtctggctgcagcacactctgagaaagaaacttatcctctcctacacataa