GENSCAN 1.0	Date run:  6-Nov-116	Time: 09:47:15

Sequence gi568815596f:159629023_159867339 : 238317 bp : 37.97% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +    330    369   40                              -3.15
 1.01 Init +   9356   9509  154  1  1   90  111   111 0.780  13.79
 1.02 Term +  35942  36831  890  0  2   47   33   246 0.076   6.63
 1.03 PlyA +  38071  38076    6                               1.05

 2.03 PlyA -  38278  38273    6                               1.05
 2.02 Term -  58372  58353   20  2  2  114   42    14 0.333  -3.10
 2.01 Init -  83520  83292  229  0  1   97  107   188 0.929  18.67
 2.00 Prom -  96509  96470   40                              -2.65

 3.00 Prom +  97854  97893   40                              -5.95
 3.01 Init + 102059 102148   90  1  0   82   64    67 0.344   2.24
 3.02 Intr + 108892 109059  168  0  0   58   63    66 0.266   0.32
 3.03 Intr + 109172 109336  165  1  0   11  101   146 0.689   7.44
 3.04 Intr + 114039 114231  193  2  1   43  110    80 0.644   3.84
 3.05 Intr + 118783 119881 1099  2  1   51   84   421 0.600  26.06
 3.06 Intr + 123380 123549  170  2  2   56   99   120 0.963   8.57
 3.07 Intr + 130204 130336  133  2  1   72  111   102 0.820   9.68
 3.08 Term + 133317 133380   64  0  1  103   42    10 0.362  -5.72
 3.09 PlyA + 133665 133670    6                               1.05

 4.06 PlyA - 134082 134077    6                               1.05
 4.05 Term - 143031 142829  203  1  2  119   38    88 0.911   3.47
 4.04 Intr - 151156 150983  174  2  0   75   94   148 0.921  13.09
 4.03 Intr - 151976 151860  117  0  0   59  115    64 0.193   5.72
 4.02 Intr - 154447 154337  111  2  0   93   53    59 0.164   2.33
 4.01 Init - 169176 169110   67  0  1   87  102   273 0.880  27.89
 4.00 Prom - 171767 171728   40                              -7.45

 5.07 PlyA - 171871 171866    6                               1.05
 5.06 Term - 176200 176022  179  2  2  102   32    77 0.982   0.37
 5.05 Intr - 178118 177951  168  0  0   69  106    81 0.988   7.00
 5.04 Intr - 179549 179427  123  0  0   81  111    68 0.990   8.04
 5.03 Intr - 181653 181504  150  1  0   45  101    77 0.937   3.91
 5.02 Intr - 186551 186383  169  2  1   71   64    89 0.971   3.40
 5.01 Init - 187903 187784  120  1  0   52   95    85 0.612   5.84
 5.00 Prom - 190328 190289   40                              -5.55

 6.00 Prom + 191094 191133   40                              -4.75
 6.01 Init + 193961 194184  224  1  2   88   72   177 0.380  14.18
 6.02 Intr + 194434 194681  248  1  2  -48   77   180 0.041  -0.52
 6.03 Term + 197065 197933  869  2  2   73   37   219 0.121   7.14
 6.04 PlyA + 199081 199086    6                               1.05

 7.12 PlyA - 199785 199780    6                               1.05
 7.11 Term - 202344 202127  218  1  2   17   49   101 0.760  -4.58
 7.10 Intr - 202764 202648  117  1  0   90  100    62 0.922   7.12
 7.09 Intr - 206623 206458  166  1  1  112   47   118 0.527   8.71
 7.08 Intr - 211933 211707  227  2  2   54   95   173 0.590  11.38
 7.07 Intr - 213352 213223  130  1  1   51   92    71 0.585   3.15
 7.06 Intr - 221118 220958  161  1  2   66  101    63 0.467   4.19
 7.05 Intr - 221445 221340  106  0  1   93   79    35 0.206   1.97
 7.04 Intr - 225513 225374  140  1  2  125  -28   141 0.098   5.46
 7.03 Intr - 225917 225882   36  0  0  106  109    46 0.741   5.82
 7.02 Intr - 229454 229340  115  2  1   97  115   -10 0.685   1.70
 7.01 Intr - 231867 231799   69  0  0  131   86    72 0.849   9.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term - 225513 225329  185  1  2  125   42   144 0.814  10.22


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_1|347_aa
MTSPNELSKTPGNNPGEKEIYDLSDKEFRIAVVRKLQRIQDNTDKSFRILSAQNLLKLIS
NFSKVSGYKINVQKSQAFLYTNNRQTESQIMGELPFTIASKRIKYLGIQLTRDVKDLFKE
NYKPLLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKT
TLKFIWNQKRAHITKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNRDIDQWNRTE
PSEITPHIYNYLIFDKPEKNKQWGKDSLFNKWCWENWLAICRKLKLDPFLTPYTKINSRW
IKDLNVRPKTIKTLEENLGITIQDIGVSNHFLRWIPFYTSTISVCKF

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_1|1044_bp
atgacctcaccaaatgaactaagtaagacaccagggaacaatcctggagaaaaagagata
tatgacctttcagacaaagaattcagaatagctgttgtgaggaagcttcaaagaattcaa
gataacacagataagtcattcagaattctatcagcccaaaatctccttaagctgataagc
aacttcagcaaagtctcaggatacaaaatcaatgtacaaaaatcacaagcattcttatac
accaacaacagacaaacagagagccaaatcatgggtgaactcccattcacaattgcttca
aagagaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggag
aactacaaaccactgctcaaggaaataaaagaggacacaaacaaatggaagaacattcca
tgctcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttac
agattcaatgccatccccatcaagctaccaatgactttcttcacagaattggaaaaaact
actttaaagttcatatggaaccaaaaaagagcccacatcaccaagtcaatcctaagccaa
aagaacaaagctggaggcatcacactacctgacttcaaactatactacaaggctacagta
accaaaacagcatggtactggtaccaaaacagagatatagatcaatggaacagaacagag
ccctcagaaataacgccgcatatctacaactatctgatctttgacaaacctgagaaaaac
aagcaatggggaaaggattccctatttaataaatggtgctgggaaaactggctagccata
tgtagaaagctgaaactggatcccttccttacaccttatacaaaaatcaattcaagatgg
attaaagatttaaacgttagacctaaaaccataaaaaccctagaagaaaacctaggcatt
accattcaggacataggcgtgtcaaaccattttctaaggtggattccattttacacgtcc
accatcagtgtttgcaaattctag

>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_2|82_aa
MAPAPLPDPAQNQPPPLSAPPCSSSPHFADFLASRESGGAAGTESCGRAGGTPPRGGALT
AGTVEELPPGSQRGATEVWGKD

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_2|249_bp
atggcgcccgcccctctcccggatccggcgcagaaccagccaccaccgttaagtgcccct
ccctgctcctcctccccccacttcgcggacttcctggcttctcgcgagagtggcggcgcg
gcggggaccgagagctgcgggcgggctggaggtaccccaccgcggggtggtgctctgact
gcgggaaccgttgaagagctgcccccggggagtcagcgaggcgccactgaggtctgggga
aaggattga

>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_3|693_aa
MGFRYVAQAGLTLLGSTILPTFPPRVLGLQLEASVAGGAFAQVLLGPAGCVLPTRTGRLC
STRAISSDPTPAKGEPDMDRQGVHGQAAASVGTEERSGTQKLGDTRNYRAPKRLSQPWFR
ELLGLDSPKGQSSSVLVAGSMSTSASASASPFQSAWYSESEITQGARSRSQNQQRDHDSK
RPKLSCTNCTTSAGRNVGNGLNTLSDVQDRVPSYSQGARPKENSMSTLQLNTSSTNHQLP
SEHQTILSSRDSRNSLRSNFSSRESESSRSNTQPGFSYSSSRDEAPIISNSERVVSSQRP
FQESSDNEGRRTTRRLLSRIASSMSSTFFSRRSSQDSLNTRSLNSENSYVSPRILTASQS
RSNVPSASEVPDNRASEASQGFRFLRRRWGLSSLSHNHSSESDSENFNQESEGRNTGPWL
SSSLRNRCTPLFSRRRREGRDESSRIPTSDTSSRSHIFRRESNEVVHLEAQNDPLGAAAN
RPQASAASSSATTGGSTSDSAQGGRNTGISGILPGSLFRFAVPPALGSNLTDNVMITVDI
IPSGWNSADGKSDKTKSAPSRDPERLQKIKESLLLEDSEEEEGDLCRICQMAAASSSNLL
IEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKEKLELNLEDFDIHELHRA
HANEQVSIFCLIWLTQQNSFELKNCFYQLQISV

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_3|2082_bp
atggggtttcgctatgttgcccaggcaggtctcacactcctgggctcaaccattctgccc
accttccctcccagagtgctgggattacagctagaagcctctgtggctggtggtgccttt
gcccaggttttgctcgggcctgctgggtgtgttctgcctactcggactggcaggctttgt
tcgactcgtgctatcagctcggatcccacgcctgccaagggtgagccagacatggatcgg
cagggggtgcatgggcaagcagcagcttctgtgggcactgaggaacgcagtggcacccaa
aagcttggagacacaaggaactacagagccccaaagaggttgtcacagccctggttcagg
gagctcctaggtctggactccccaaagggtcagagctcttccgtccttgtcgccggcagc
atgtctacatcagcatcagcatctgcgtcaccatttcaatctgcatggtatagtgaatct
gagataactcagggagcacgctcaagatcgcagaaccagcaacgggatcatgattcaaaa
agacctaaactttcctgtacaaactgtactacctcagctgggagaaatgttggaaatggt
ttaaacacattatcagatgttcaagacagagttccttcatattcacaaggagcaagacca
aaagaaaactcaatgagcactttacagttgaatacatcatccacaaaccaccaattgcct
tctgaacatcagaccatactaagttctagggactccagaaattctttaagatcaaatttt
tcttcaagagaatcagaatcttcccgaagcaatacgcagcctggattttcttacagttca
agtagagatgaagccccaatcataagcaattcagaaagggttgtttcatctcaaagacca
tttcaagaatcttctgacaatgaaggtaggcggacaacgaggagattgctgtcacgcata
gcttctagcatgtcatctacttttttttcacgaagatctagtcaggattccttgaataca
agatcattgaattctgaaaattcttacgtttctccaagaatcttgacagcttcacagtcc
cgtagtaatgtaccatcagcttctgaagttcccgataatagggcatctgaagcttctcag
ggatttcgatttcttaggcgaagatggggtttgtcatctcttagccacaatcatagctct
gagtcagattcagaaaattttaaccaagaatctgaaggtagaaatacaggaccatggtta
tcttcctcacttagaaatagatgcacacctttgttctctagaaggaggcgagagggaaga
gatgaatcttcaaggatacctacctctgatacatcatctagatctcatatttttagaaga
gaatcaaatgaagtggttcaccttgaagcacagaatgatcctcttggagctgctgccaac
agaccacaagcatctgcagcatcaagcagtgccacaacaggtggctctacatcagattcg
gctcaaggtggaagaaatacaggaatatcagggattcttcctggttccttattccggttt
gcagtccctccagcacttgggagtaatttgaccgacaatgtcatgatcacagtagatatt
attccttcaggttggaattcagctgatggtaaaagtgataaaactaaaagtgcgccttca
agagatccagaaagattgcagaaaataaaagagagcctccttttagaggactcagaagaa
gaagaaggtgacttatgtagaatttgtcaaatggcagctgcatcatcatctaatttgctg
atagagccatgcaagtgcacaggaagtttgcagtatgtccaccaagactgtatgaaaaag
tggttacaggccaaaattaactctggttcttcattagaagctgtaaccacctgtgaacta
tgtaaagagaagttggagcttaacctggaggattttgatattcatgaactacatagagct
catgcaaatgaacaagttagtatattttgcctaatttggttaacacaacagaacagtttt
gaattgaagaactgtttttaccaactacaaatttctgtgtga

>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_4|223_aa
MLRAALPALLLPLLGLAAAAVADCPSSTWIQFQDSCYIFLQEAIKVESIEDVRNQCTDHG
ADMISIHNEEENAFILDTLKKQWKGPDDILLGMFYDTDDASFKWFDNSNMTFDKWTDQDD
DEDLVDTCAFLHIKTGEWKKGNCEVSSVEGTLCKTANNHILISALVIASTVILTVLGAII
WFLYKKHSDSRFTTVFSTAPQSPYNEDCVLVVGEENEYPVQFD

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_4|672_bp
atgctccgggccgcgctgcccgcgctcctgctgccgttgctgggcctcgccgctgctgcc
gtcgcggactgtccttcatctacttggattcagttccaagacagttgttacatttttctc
caagaagccatcaaagtagaaagcatagaggatgtcagaaatcagtgtactgaccatgga
gcggacatgataagcatacataatgaagaagaaaatgcttttatactggatactttgaaa
aagcaatggaaaggcccagatgatatcctactaggcatgttttatgacacagatgatgcg
agtttcaagtggtttgataattcaaatatgacatttgataagtggacagaccaagatgat
gatgaggatttagttgacacctgtgcttttctgcacatcaagacaggtgaatggaaaaaa
ggaaattgtgaagtttcttctgtggaaggaacactatgcaaaacagctaataaccacatt
ttaatatcagcattggtgattgctagcacggtaattttgacagttttgggagcaatcatt
tggttcctgtacaaaaaacattctgattctcgtttcaccacagttttttcaaccgcaccc
caatcaccttataatgaagactgtgttttggtagttggagaagaaaatgaatatcctgtt
caatttgactaa

>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_5|302_aa
MCSQSGGHLASVHNQNGQLFLEDIVKRDGFPLWVGLSSHDGSESSFEWSDGSTFDYIPWK
GQTSPGNCVLLDPKGTWKHEKCNSVKDGAICYKPTKSKKLSRLTYSSRCPAAKENGSRWI
QYKGHCYKSDQALHSFSEAKKLCSKHDHSATIVSIKDEDENKFVSRLMRENNNITMRVWL
GLSQHSVDQSWSWLDGSEVTFVKWENKSKSGVGRCSMLIASNETWKKVECEHGFGRVVCK
VPLGPDYTAIAIIVATLSILVLMGGLIWFLFQRHRLHLAGFSSVRYAQGVNEDEIMLPSF
HD

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_5|909_bp
atgtgttctcaaagtggaggtcacttggcaagcgttcacaaccaaaatggccagctcttt
ctggaagatattgtaaaacgtgatggatttccactatgggttgggctctcaagtcatgat
ggaagtgaatcaagttttgaatggtctgatggtagtacatttgactatatcccatggaaa
ggccaaacatctcctggaaattgtgttctcttggatccaaaaggaacttggaaacatgaa
aaatgcaactctgttaaggatggtgctatttgttataaacctacaaaatctaaaaagctg
tcccgtcttacatattcatcaagatgtccagcagcaaaagagaatgggtcacggtggatc
cagtacaagggtcactgttacaagtctgatcaggcattgcacagtttttcagaggccaaa
aaattgtgttcaaaacatgatcactctgcaactatcgtttccataaaagatgaagatgag
aataaatttgtgagcagactgatgagggaaaataataacattaccatgagagtttggctt
ggattatctcaacattctgttgaccagtcttggagttggttagatggatcagaagtgaca
tttgtcaaatgggaaaataaaagtaagagtggtgttggaagatgtagcatgttgatagct
tcaaatgaaacttggaaaaaagttgaatgtgaacatggttttggaagagttgtctgcaaa
gtgcctctgggccctgattacacagcaatagctatcatagttgccacactaagtatctta
gttctcatgggcggactgatttggttcctcttccaaaggcaccgtttgcacctggcgggt
ttctcatcagttcgatatgcacaaggagtgaatgaagatgagattatgcttccttctttc
catgactaa

>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_6|446_aa
MGRNQCKKAENSKNQNTSSPPKDHNSSPASEQNWMEKEFDELTEVGFRRWVITNCSELKE
HVLTQCKEAKNLEKRPNLRLTGVPESDEENETKLENTLQDIIWENFTNLARQANTEIQKT
QRTTQRYSSRGATPKHIIIKFTKVEMKEKMLRTAREKVLEVLARAIWQEKEMKGIQMGRG
EVKLSLFADDMIVYLESPITSAQILLKLIRNLSKVSRYKINVQKSQAFLYTNNRQIESQI
MNELPFTTVTKRIKYLGIQLTWDVKDLFKENYKPLLKEIKEDTNKWKNIPCSWIGRINIV
KMAILPKVIYRFNAIPMKLPLTFFTELEKTTLNFIWNQKRARIAKTILDKKNKDGGIMLP
DFKLYYEATVTKTSWYWYQNRDIDQWNRTEASEITPHIYNHLIFDKSDTNKHWVKYSLFN
KWCWENWLAICRKLKLDPPSSHLIQK

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_6|1341_bp
atggggagaaaccagtgcaaaaaggctgaaaattccaaaaaccagaacacttcttctcct
ccaaaggatcacaactcttcaccagctagcgaacaaaactggatggagaaagagtttgat
gaattgacagaagtgggcttcagaaggtgggtaattacaaactgctccgagctaaaggag
catgttctaacccaatgcaaggaagctaagaaccttgaaaaaagaccaaatctacgtttg
actggtgtacctgaaagtgatgaggagaatgaaaccaagttggaaaacacacttcaggat
attatctgggagaacttcaccaacctagcaagacaggccaacactgaaattcagaagaca
cagagaacaacccaaagatactcctcgagaggagcaaccccaaaacacataatcatcaaa
tttaccaaggttgaaatgaaggaaaaaatgttaagaacagccagagagaaagtattggaa
gttctggccagggcaatctggcaagagaaagaaatgaagggcattcaaatgggaagaggg
gaagtcaaattgtctctgtttgcagatgacatgattgtatatttagaaagccccatcacc
tcagcccaaattctccttaagctgataaggaacctcagcaaagtctcaagatacaaaatc
aatgtgcaaaaatcacaagcattcctgtacaccaataacagacaaatagagagccaaatc
atgaatgaactcccattcacaactgttacaaagagaataaaatacctaggaatacaactt
acctgggatgtgaaggacctcttcaaggagaactacaaaccactgctcaaggaaataaaa
gaggacacaaacaaatggaaaaacattccatgctcatggataggtagaatcaatatcgtg
aaaatggccatactgcccaaagtaatttatagattcaatgctatccccatgaagctacca
ctgactttcttcacagaactggaaaaaactactttaaacttcatatggaaccaaaaaaga
gcccggatagccaagacaatcctggacaagaagaacaaagatggaggcatcatgctacct
gacttcaaactatactatgaggctacagtaaccaaaacatcatggtactggtaccaaaac
agagatatagaccaatggaacagaacagaggcctcagaaataacaccacacatctacaac
catctgatctttgacaaatctgacacaaacaagcactgggtaaaatattccctatttaat
aaatggtgttgggaaaactggctagccatatgcagaaaactgaaactggaccccccttcc
tcacaccttatacaaaaataa

>gi568815596f:159629023_159867339|GENSCAN_predicted_peptide_7|494_aa
VSTIIMPNEFQQDYDIRDCAAVKVFHRPWRRGWHFYDDREFIYLRPFACDTKLEWVCQIP
KGRTPKTPDWYNPDRAGIHGPPLIIEGSEYWFVADLHLNYEEAVLYCASNHSFLATITSF
CFLKIKPVSLTFSQASDTCHSYGGTLPSVLSQIEQDFITSLLPDMEATLWIGLRWTAYEK
INKWTDNRELTYSNFHPLLVSGRLRIPENFFEEESRYHCALILNLQKSPFTGTWNFTSCS
ERHFVSLCQKYSEVKSRQTLQNASETVKYLNNLYKIIPKTLTWHSAKRECLKSNMQLVSI
TDPYQQAFLSVQALLHNSSLWIGLFSQDDELNFGWSDGKRLHFSRWAETNGQLEDCVVLD
TDGFWKTVDCNDNQPGAICYYSGNPKSHILSIRDEKENNFVLEQLLYFNYMASWVMLGIT
YRSFTESMAGQPQETYNHVRGEWETSRFYYGGAGERVKEEVLHTFEQPELIRTHSLSREQ
QGGKSPPTRPLLQD

>gi568815596f:159629023_159867339|GENSCAN_predicted_CDS_7|1485_bp
gtgtctactattatcatgccaaatgagtttcagcaggattatgacatcagagactgtgct
gctgtcaaggtatttcataggccatggcgaagaggctggcatttctatgatgatagagaa
tttatttatttgaggccttttgcttgtgatacaaaacttgaatgggtgtgccaaattcca
aaaggccgtactccaaaaacaccagactggtacaatccagaccgtgctggaattcatgga
cctccacttataattgaaggaagtgaatattggtttgttgctgatcttcacctaaactat
gaagaagccgtcctgtactgtgccagcaatcacagctttcttgcaactataacatctttt
tgttttctaaagatcaaacccgtgtctctcacattttctcaagcaagcgatacctgtcac
tcctatggtggcacccttccttcagtgttgagccagattgaacaagactttattacatcc
ttgcttccggatatggaagctactttatggattggtttgcgctggactgcctatgaaaag
ataaacaaatggacagataacagagagctgacgtacagtaactttcacccattattggtt
agtgggaggctgagaataccagaaaatttttttgaggaagagtctcgctaccactgtgcc
ctaatactcaacctccaaaaatcaccgtttactgggacgtggaattttacatcctgcagt
gaacgccactttgtgtctctctgtcagaaatattcagaagttaaaagcagacagacgttg
cagaatgcttcagaaactgtaaagtatctaaataatctgtacaaaataatcccaaagact
ctgacttggcacagtgctaaaagggagtgtctgaaaagtaacatgcagctggtgagcatc
acggacccttaccagcaggcattcctcagtgtgcaggcgctccttcacaactcttcctta
tggatcggactcttcagtcaagatgatgaactcaactttggttggtcagatgggaaacgt
cttcattttagtcgctgggctgaaactaatgggcaactcgaagactgtgtagtattagac
actgatggattctggaaaacagttgattgcaatgacaatcaaccaggtgctatttgctac
tattcaggaaatccaaaatcacatattctgagtattcgagatgaaaaggagaataacttt
gttcttgagcaactgctgtacttcaattatatggcttcatgggtcatgttaggaataact
tatagaagctttacagaaagcatggctgggcagcctcaggaaacttacaatcatgtcaga
ggcgaatgggaaacaagcaggttttactatggtggagcaggagagagagtgaaggaggag
gtgctacacacttttgaacaaccagaactcattagaactcactcactatcacgagaacag
caagggggaaaatcacctcccaccaggcccctcctccaagactga