GENSCAN 1.0	Date run:  6-Nov-116	Time: 18:21:06

Sequence gi568815596f:105141859_105342974 : 201116 bp : 44.50% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   1712   1829  118  0  1   75  100    18 0.311   1.22
 1.02 Intr +   2235   2317   83  0  2   84   88    26 0.561   1.48
 1.03 Intr +  10899  10979   81  1  0  113   33    36 0.374   0.21
 1.04 Term +  14265  14446  182  1  2   79   38    88 0.706   0.67
 1.05 PlyA +  15113  15118    6                               1.05

 2.00 Prom +  15272  15311   40                              -2.86
 2.01 Init +  27452  27537   86  1  2   50   92    40 0.059   0.89
 2.02 Intr +  35705  35772   68  2  2   59   94    58 0.151   2.05
 2.03 Term +  36162  36268  107  1  2  110   48    66 0.811   3.37
 2.04 PlyA +  37692  37697    6                               1.05

 3.04 PlyA -  40236  40231    6                               1.05
 3.03 Term -  43842  43734  109  2  1  116   47    73 0.480   3.98
 3.02 Intr -  46678  46528  151  2  1   30   31    89 0.145  -3.38
 3.01 Init -  54458  54371   88  2  1   87   81    21 0.154   2.11
 3.00 Prom -  64431  64392   40                              -2.46

 4.03 PlyA -  65195  65190    6                               1.05
 4.02 Term -  66775  66342  434  2  2   44   41   249 0.934  11.26
 4.01 Init -  68856  68751  106  0  1   62   59   117 0.344   4.61
 4.00 Prom -  70191  70152   40                              -4.96

 5.06 PlyA -  70360  70355    6                               1.05
 5.05 Term -  70675  70588   88  0  1   46   43   118 0.055   0.23
 5.04 Intr -  92414  92230  185  2  2   32   81   104 0.250   2.69
 5.03 Intr -  93748  93633  116  2  2   69  116    -4 0.236   0.67
 5.02 Intr -  95085  94890  196  0  1   84   96    75 0.208   6.89
 5.01 Init -  95438  95304  135  2  0   68   97    41 0.302   3.20
 5.00 Prom -  97764  97725   40                              -8.26

 6.00 Prom +  97890  97929   40                              -8.16
 6.01 Sngl + 100001 101119 1119  1  0   99   50  2110 0.962 205.04
 6.02 PlyA + 103253 103258    6                               1.05

 7.17 PlyA - 103936 103931    6                               1.05
 7.16 Term - 116575 116543   33  1  0  105   50    28 0.185  -1.71
 7.15 Intr - 127847 127414  434  0  2   60  115   683 0.686  61.57
 7.14 Intr - 131156 130997  160  2  1   98   85   214 0.997  21.66
 7.13 Intr - 131832 131686  147  0  0  103   99   107 0.999  13.73
 7.12 Intr - 133845 133702  144  0  0   92   68   233 0.999  22.18
 7.11 Intr - 135813 135756   58  2  1   89  109    18 0.998   2.89
 7.10 Intr - 138865 138524  342  0  0   24   87   509 0.937  38.95
 7.09 Intr - 142540 142458   83  1  2  105   91    59 0.728   6.34
 7.08 Intr - 154652 154498  155  0  2   84   72    80 0.896   5.79
 7.07 Intr - 156847 156653  195  2  0   97   73   229 0.950  21.69
 7.06 Intr - 157704 157641   64  0  1   30   72    38 0.016  -5.31
 7.05 Intr - 166460 165625  836  0  2  105   54  1271 0.008 116.51
 7.04 Intr - 181452 181434   19  0  1  107   90    29 0.004   1.18
 7.03 Intr - 186994 186804  191  2  2   50   45   158 0.024   7.00
 7.02 Intr - 187896 187767  130  0  1   54  117    65 0.915   6.27
 7.01 Init - 188421 188359   63  0  0  109   88    75 0.996   8.81
 7.00 Prom - 190069 190030   40                              -7.46

 8.03 PlyA - 190660 190655    6                               1.05
 8.02 Term - 195819 195664  156  0  0   28   45   225 0.473  10.13
 8.01 Intr - 196125 195964  162  0  0  126   30    35 0.347   1.67

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_1|154_aa
XCHSVSLRPRAFQLPGLSFAAHKMVGPSESEVCGRVEGGSCGSGSSRRRRGRAAFVSGRR
ARGAQRRRRRREERACIDDFDCDCVYVQHTVKNMEFHNMLSRKIQLLIPSEDFHHMEDSK
KHSNANNQKKEPTDLGHCICCDFRVAKGDLHSRH

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_1|465_bp
ncctgccactcagtatccctgcgtcctcgggcatttcaactcccaggtctcagttttgct
gctcataaaatggttggaccatccgaaagcgaggtgtgcgggcgggtggaaggaggaagc
tgcggctcggggagcagccggcggcgccgcggccgcgcagcctttgtctcgggccgccgg
gcgcgcggggcccagcgcaggcgaaggagaagagaagagagggcgtgtatagatgacttt
gactgtgactgtgtttatgtccaacacactgtgaaaaatatggaatttcataatatgttg
agcaggaagatccagctactaatcccaagtgaggatttccaccacatggaggacagcaag
aagcacagcaatgccaataaccagaagaaggagcctacagaccttggccactgcatctgc
tgcgatttcagagttgccaagggggacttacactcaaggcactga

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_2|86_aa
MGFKTCYPNTLAFEKTAEAGRSLSPSPQSRMDLVTTLAKECDRNPAGDSDTGISQRQAAS
SLRTLILIARQRPTPNPIALGSGVLT

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_2|261_bp
atggggttcaagacctgctaccccaacaccttggcgtttgagaaaacagcagaagcagga
aggtctctctcaccttccccccagagccgaatggaccttgtgactaccttggccaaagaa
tgtgacagaaatcctgctggagactctgacacaggtatcagccagcggcaggcagcaagc
tctctccggactctcatccttatcgcccgccaaaggcccacccctaatcccatcgcactg
gggagtggtgttttaacataa

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_3|115_aa
MVLSMNQAEGCHREPSLLCLDLGTSSLQNALYSSSKQDSIAGATLKVPKVDDETFQYLNS
PGFQPFIVRKGSSTKLTLLKENGIIVGRERAVAALSSKAVRAGVTVKAQGTKSCS

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_3|348_bp
atggtgctgtctatgaaccaggcagagggctgtcatcgagaaccaagtttactatgcctt
gatcttgggacttcgagcctccagaatgctttatattcatcttcaaagcaagattctata
gcaggagctacactgaaagtaccaaaagtggatgatgaaacatttcagtatctcaattcc
cctggttttcaaccattcattgtaagaaaaggctctagtaccaagctgactttgttaaaa
gagaacggaataattgttgggagagagagagcagtggcggccctcagtagcaaggccgtg
agagctggggtcactgtgaaggcccagggcaccaagagctgctcctga

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_4|179_aa
MASRPIREVRGASARPPLLGSEEPLCPASRPVREGEIQTTIRDYYKHLYANKLENLEEMD
KFLDTYTLPRLNQEEVESLNRPITGAEIVAIINSLPTKKSPGPDGFTAGFYQRYKEELVP
FLLKLFQSTEKEGILPNSFYEASIILIPKPGRDTTEKENFRPISLMNIDAKILNKILAN

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_4|540_bp
atggccagccgccccatccgggaggtgaggggcgcttctgcccggccgcccctactggga
agtgaggagcccctctgcccggccagccgccccgtccgggagggagaaatacaaactacc
atcagagattactacaaacacctctatgcaaataaactagaaaatctagaagaaatggat
aaattcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctgaat
agaccaataacaggagctgaaattgtggcaataatcaatagcttaccaaccaaaaagagt
ccaggaccagatggattcacagctggattctaccagaggtacaaggaggaactggtacca
ttccttctgaaactattccaatcaacagaaaaagagggaatcctccctaactcattttat
gaggccagcatcatcctgataccaaagccgggcagagacacaaccgaaaaagagaatttt
agaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaactga

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_5|239_aa
MPCEGTKAGRTRETCGGTVGAAPWQGAEQQRRLPRGGGRLPGNRSQLHLPPVTLPLYLQQ
KLPWARPCSHVASSVGASIPIGPFPSSASKGVACIPVPLHLDPVGSRLRPGYAERGHSDN
DVTSSSYQTFISGMSQHWEPQEGCLSAGKEWNPIVNCAREGSRLRTPYVNLMPDDLMPDD
LLRWNSFIPKPSAPGPVEKLPPNKRIPGAKRPALKELLKEALNMERNNRYQLLQNHAKM

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_5|720_bp
atgccttgcgaggggacaaaggcgggcagaaccagagagacctgcggaggcacagtcggg
gcagccccgtggcagggagccgagcagcagcggcgattgccacgtggaggaggtagactt
cctggcaaccggtcgcaactccacttgccccctgtgacactgcccctgtacctccagcaa
aagctgccctgggctcgtccttgttcccacgtggcttcgtctgtcggagcatccattcct
attggccccttccccagctctgcgtcgaaaggtgttgcgtgcatcccggtgcctctgcac
ctggaccctgtgggatcgaggctgcgcccaggctatgcagagagaggccactcagataat
gatgtaactagcagttcctatcagacttttatatcaggaatgagtcagcattgggagcca
caggaaggatgtctttcagcaggaaaggagtggaaccctattgtgaattgtgcacgtgag
ggatctaggttgcgcactccttatgtgaatctaatgcccgatgatctaatgcctgatgat
ctgctgagatggaacagtttcatcccaaaaccatccgctcctggtcctgtggaaaaattg
cctcccaacaaacggatccctggtgccaaaaggcctgccctgaaagagctcctgaaggaa
gcactaaacatggaaaggaacaaccggtaccagctgctgcaaaatcatgccaaaatgtaa

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_6|372_aa
MACNSTSLEAYTYLLLNTSNASDSGSTQLPAPLRISLAIVMLLMTVVGFLGNTVVCIIVY
QRPAMRSAINLLLATLAFSDIMLSLCCMPFTAVTLITVRWHFGDHFCRLSATLYWFFVLE
GVAILLIISVDRFLIIVQRQDKLNPRRAKVIIAVSWVLSFCIAGPSLTGWTLVEVPARAP
QCVLGYTELPADRAYVVTLVVAVFFAPFGVMLCAYMCILNTVRKNAVRVHNQSDSLDLRQ
LTRAGLRRLQRQQQVSVDLSFKTKAFTTILILFVGFSLCWLPHSVYSLLSVFSQRFYCGS
SFYATSTCVLWLSYLKSVFNPIVYCWRIKKFREACIELLPQTFQILPKVPERIRRRIQPS
TVYVCNENQSAV

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_6|1119_bp
atggcctgcaacagcacgtcccttgaggcttacacatacctgctgctgaacaccagcaac
gcctcagactcggggtccacccagttgcccgcacccctcaggatctccttggccatagtg
atgctgctgatgaccgtggtggggttcctgggcaacactgtggtctgcatcatcgtgtac
cagaggccggctatgcgctcggccatcaacctgctgctggccaccctggccttctccgac
atcatgctgtccctctgctgcatgcccttcaccgccgtcaccctcatcaccgtgcgctgg
cactttggggaccacttctgccgcctctcagccacgctctactggttttttgtcctggag
ggcgtggccatcctgctcatcatcagcgtggaccgcttcctcatcatcgtccagcgccag
gacaagctgaacccgcgcagggccaaggtgatcatcgcggtctcctgggtgctgtccttc
tgcatcgcggggccctcgctcacgggctggacgctggtggaggtgccggcgcgggcccca
cagtgcgtgctgggctacacggagctccccgctgaccgcgcctacgtggtcaccttggtg
gtggccgtgttcttcgcgccctttggcgtcatgctgtgcgcctacatgtgcatcctcaac
acggtccgcaagaacgccgtgcgcgtgcacaaccagtcggacagcctggacctgcggcag
ctcaccagggcgggcctgcggcgcctgcagcggcagcaacaggtcagcgtggacttgagc
ttcaagaccaaggccttcaccaccatcctgatcctcttcgtgggcttctccctctgctgg
ctgccccactccgtctacagcctcctgtctgtgtttagccagcgcttttactgcggttcc
tccttctacgccaccagcacctgcgtcctgtggctcagttacctcaagtccgtcttcaac
cccatcgtctactgctggagaatcaaaaaattccgcgaggcctgcatagagttgctgccc
cagaccttccaaatcctccccaaagtgcctgagcggatccgaaggagaatccagccaagc
acagtctacgtgtgcaatgaaaaccagtctgcggtttag

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_7|1017_aa
MGLVGGLRIPTMPSSPGGAPARLAAAPRDGKRRLRGRASPGAAGRSGAAGPQAAGRRGTA
GAGAGLLSDPQEASYLAAKNGGSQITQQALLHVDCTRSCGQNMSEQSLITDEVLMGKHLV
YQEGRQLREADKARADQPVDMMSIKAFTLVSAVERELLMGDKERVNIECVECCGRDLYVG
TNDCFVYHFLLEERPVPAGPATFTATKQLQRHLGFKKPVNELRAASALNRLLVLCDNSIS
LVNMLNLEPVPSGARIKGAATFALNENPVSGDPFCVEVCIISVKRRTIQMFLVYEDRVQI
VKEVSTAEQPLAVAVDGHFLCLALTTQYIIHNYSTGVSQDLFPYCSEERPPIVKRIGRQE
FLLAGPGGLGEEDAFVRLIFLGGLGDCVLKLESEIGAVQNKSSVTLGVCGKTEFSGWAMF
SLKQVNAVTLFDLQGMFATVAGISQRAPVHWSENVIGAAVSFPYVIALDDEFITVHSMLD
QQQKQTLPFKEGHILQDFEGRVIVATSKGVYILVPLPLEKQIQDLLASRRVEEALVLAKG
ARRNIPKEKFQVMYRRILQQAGFIQFAQLQFLEAKELFRSGQLDVRELISLYPFLLPTSS
SFTRSHPPLHEYADLNQLTQGDQEKMAKCKRFLMSYLNEVRSTEVANGYKEDIDTALLKL
YAEADHDSLLDLLVTENFCLLTDSAAWLEKHKKYFALGLLYHYNNQDAAAVQLWVNIVNG
DVQDSTRSDLYEYIVDFLTYCLDEELVWAYADWVLQKSEEVGVQVFTKRPLDEQQKNSFN
PDDIINCLKKYPKALVKYLEHLVIDKRLQKEEYHTHLAVLYLEEVLLQRASASGKGAEAT
ETQAKLRRLLQKSDLYRVHFLLERLQGAGLPMESAILHGKLGEHEKALHILVHELQDFAA
AEDYCLWCSEGRDPPHRQQLFHTLLAIYLHAGPTAHELAVAAVDLLNRHATEFDAAQVLQ
MLPDTWSVQLLCPFLMGAMRDSIHARRTMQVALGLARSENLIYTYDKALSGLDDAHT

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_7|3054_bp
atgggcctcgtgggagggctgcgcatcccaaccatgccttcgtctcctggtggggcaccg
gcgcgcctggcggccgccccacgtgacgggaagcggcggctgcggggtcgggccagccca
ggagccgcgggccggagcggggcggcggggccccaggccgcggggcggcgcgggacggcg
ggcgccggcgccggactgttgagtgaccctcaggaagcctcctacctggctgctaaaaat
gggggctcacagatcacacagcaggccttactgcacgtggactgcacgcgcagctgtggt
caaaacatgtctgagcagagtttaatcactgatgaagtgctcatgggcaagcaccttgtc
tatcaggaaggaaggcagctgcgggaagctgacaaagccagagcagatcagccagtagac
atgatgagcatcaaagcctttacgcttgtctctgctgtggagcgggagctgctgatgggc
gacaaggagcgcgtcaacatagagtgcgtggagtgctgcggcagggacctctacgtgggc
accaacgactgcttcgtctaccacttcctgttggaggagaggccagtgcctgctgggcca
gccacgttcactgccaccaaacagctgcagagacacttgggcttcaagaagcccgtgaac
gagctgcgtgcggcctcagcactcaacaggctgctggtgctgtgtgacaactccatcagc
ctggtcaacatgctgaacctcgagccagtgccttcgggggcccgcatcaagggggcagcc
acgtttgcactgaacgagaaccctgtgagtggggaccccttctgtgtagaagtttgcatc
atctctgtcaaacgcagaaccatccagatgtttctggtgtacgaggaccgggtgcagatc
gtcaaggaggtgtcgactgccgagcagcccctcgctgtggctgtggacggccacttcctg
tgtctggctctgaccactcagtacatcatccacaattacagcacaggcgtctcccaggac
ctgtttccctactgcagtgaggagaggccgccgatcgtcaagaggatagggagacaggag
ttcctgctggcgggccccggagggctgggtgaggaggatgcatttgtgcgcctgatcttt
ttgggtggcctcggtgactgcgtgttgaaactggagagtgagattggcgctgtgcagaat
aaatcctcagtgacattgggcgtgtgtggcaagacagagttctctggttgggcgatgttc
agccttaagcaggtaaatgcagtgaccctctttgacctccagggcatgtttgccacagtc
gcagggatatcccagcgcgcccccgtgcactggtcggagaatgtgattggggcggctgtg
tcctttccatacgtcatagcgctcgatgacgaattcatcacagtccacagcatgttggat
cagcaacagaagcagacgctgccctttaaggagggccatatcctacaggactttgaagga
agagtgatcgttgccacaagtaaaggagtttacatcttggttccattacctttggaaaaa
caaatacaggatcttctagcaagccgcagagtagaagaggctttggttttagcaaaagga
gcccggaggaacattccaaaggaaaaatttcaggtaatgtacagaaggattctgcagcag
gcgggatttatacagtttgcacaacttcagttcctggaagctaaagagctcttcagaagc
ggccagcttgatgtccgggagctgatctctctctaccccttcctgttgcccacctcctcc
tccttcacccggtcccaccctcctcttcatgagtacgcagacctgaaccagctgacccag
ggggaccaggagaagatggccaagtgcaaacgcttcctcatgagctacctgaacgaggtc
cgcagcacagaggtagcaaatggctacaaggaggacatcgacacagccttgctcaaactg
tatgcagaggctgaccacgacagcctgctggacctcctggtcactgagaacttctgtctt
ctgacggacagtgctgcctggctagagaagcacaaaaagtattttgcacttggactgctc
tatcattataataaccaagatgctgctgcagttcagttgtgggtgaacattgtgaatggc
gatgtccaggactccacacgctcagacctgtatgaatacatcgtggattttcttacctac
tgcttagacgaggaactagtgtgggcctatgctgattgggtcctgcagaaaagtgaagag
gtcggagttcaggttttcaccaagagacctttggatgaacagcagaagaacagttttaat
ccagacgacattatcaattgccttaaaaaataccctaaagcccttgtgaagtatctggaa
catcttgtgatagacaagagactgcagaaagaagagtatcacacccacttagctgtgctg
tacctggaagaggtgctgctgcagagggcctccgccagtggcaagggtgcagaggccacc
gagacgcaggccaagctgcggcggctgctccagaaatctgatttataccgagtccacttt
cttctcgagaggctgcagggagctggcctgcccatggagagcgccatcctgcacgggaag
ctgggcgagcatgagaaggcgctgcatatcctggtgcacgagctgcaggactttgcagcg
gccgaggactactgcctgtggtgctccgagggccgagacccaccccaccgccagcaactc
tttcacacgctgctggccatctacctgcatgctggccccactgcccacgagctggccgtg
gctgccgtggacctgctgaaccgccacgccaccgaatttgatgcagcccaggtgctgcag
atgctgcctgacacctggtcagtgcagctcctctgcccattcctgatgggggccatgagg
gacagcatccatgccaggaggaccatgcaggtggctctcggcctggccaggtccgaaaac
ttaatctacacctacgataaggccctcagtggattggatgatgcccacacatag

>gi568815596f:105141859_105342974|GENSCAN_predicted_peptide_8|105_aa
VGAYTQAGGVAWDSSLQAIGTQIDKPYFPSIPDILRTSHFWRGGEEQERGDSCLSEEKEL
LGQQLRVQQQFRVRAAATAHIPRHGRRQETPVGYPQSPAKEALRK

>gi568815596f:105141859_105342974|GENSCAN_predicted_CDS_8|318_bp
gtcggggcttacacacaggcagggggtgtcgcctgggactcctctttacaagccatcggg
actcagatagataagccctatttcccaagcattcctgatattctacggacgtctcatttt
tggagagggggcgaggagcaggagcgaggagacagctgcctgagtgaggagaaggaactc
ctgggacagcagctccgggtgcagcagcagttccgagtccgtgcagctgcgaccgcccac
atcccccgccatggtcgtcgccaggagaccccagtcggctacccacaaagccccgcgaag
gaagcgttgcggaagtga