GENSCAN 1.0	Date run:  8-Nov-116	Time: 11:03:26

Sequence gi568815595r:195468903_195679461 : 210559 bp : 45.55% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 Intr -   2379   2328   52  1  1  111   71    55 0.020   4.07
 1.03 Intr -  50283  50116  168  1  0   62   72   152 0.886  10.92
 1.02 Intr -  54884  54790   95  1  2   46   53   124 0.999   4.31
 1.01 Init -  55990  55917   74  1  2   62  100   100 0.932   9.14
 1.00 Prom -  59428  59389   40                              -3.56

 2.05 PlyA -  59567  59562    6                               1.05
 2.04 Term -  69171  69163    9  0  0   98   43     0 0.173  -5.31
 2.03 Intr -  74264  74002  263  0  2    7   83   388 0.566  27.41
 2.02 Intr -  81301  81232   70  1  1   59   86    48 0.542   0.45
 2.01 Init -  96957  96727  231  0  0   48   98   115 0.698   6.76
 2.00 Prom -  97600  97561   40                              -5.06

 3.05 PlyA -  98252  98247    6                               1.05
 3.04 Term - 100233  99998  236  1  2  102   41   281 0.843  21.28
 3.03 Intr - 102463 102375   89  0  2   74   78    68 0.991   4.01
 3.02 Intr - 105069 104948  122  0  2   78  105   100 0.995   9.99
 3.01 Init - 110559 110437  123  0  0   93   93   201 0.980  19.29
 3.00 Prom - 121235 121196   40                              -4.66

 4.00 Prom + 139735 139774   40                              -3.36
 4.01 Sngl + 149755 151215 1461  0  0   60   49  1046 0.285  92.63
 4.02 PlyA + 152236 152241    6                               1.05

 5.10 PlyA - 153974 153969    6                               1.05
 5.09 Term - 156052 155779  274  0  1   77   43   118 0.236   1.14
 5.08 Intr - 157460 157357  104  2  2   53   94    35 0.413  -0.43
 5.07 Intr - 157879 157748  132  1  0  102   76    42 0.613   5.24
 5.06 Intr - 159605 159470  136  1  1   12   90    95 0.197   2.67
 5.05 Intr - 160371 160186  186  2  0  125   -9   118 0.205   4.60
 5.04 Intr - 178020 177820  201  2  0   95   46   203 0.524  15.20
 5.03 Intr - 179607 178612  996  2  0   71  -66   548 0.106  27.63
 5.02 Intr - 180191 179737  455  2  2   27  -15   299 0.195   5.56
 5.01 Init - 181541 181200  342  2  0   66  -34   265 0.178   9.34
 5.00 Prom - 183958 183919   40                              -8.86

 6.00 Prom + 185421 185460   40                              -5.66
 6.01 Init + 186232 186473  242  0  2   74   86   175 0.494  13.25
 6.02 Intr + 189146 189263  118  2  1   42  101   122 0.415   9.37
 6.03 Intr + 193669 193716   48  0  0   83   54    51 0.471   0.08
 6.04 Intr + 194722 194865  144  0  0   56   49   240 0.951  17.38
 6.05 Intr + 195184 195348  165  0  0  115   86    70 0.998   9.66
 6.06 Intr + 197164 197312  149  0  2   97   53   129 0.608   9.33
 6.07 Intr + 198416 198641  226  2  1   16   67    95 0.518  -1.81
 6.08 Intr + 199559 199739  181  1  1   58   91   188 0.921  15.54
 6.09 Intr + 202230 202398  169  1  1   60  100   146 0.975  12.00
 6.10 Intr + 203582 203777  196  2  1   81   64   296 0.982  25.92
 6.11 Intr + 204916 205085  170  0  2  133  119    92 0.989  15.54
 6.12 Term + 205918 205999   82  1  1  110   39    74 0.460   1.87
 6.13 PlyA + 206221 206226    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl +  85812  86063  252  2  0   51   47   182 0.932   5.49


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:195468903_195679461|GENSCAN_predicted_peptide_1|130_aa
MGDDEDACSDTEATEAMAPDILARKLAAAEGLEPKYRIQEQESSGEEDSDLSPEEREKKR
QFEMKRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADGESMNTEESNQDLDTKQTC
WIVKVRKDAS

>gi568815595r:195468903_195679461|GENSCAN_predicted_CDS_1|390_bp
atgggggatgatgaagatgcctgtagtgacaccgaggccactgaagccatggcgccagac
atcttagccaggaaattagctgcagctgaaggcttggagccaaagtatcggattcaggaa
caagaaagcagtggagaggaggatagtgacctctcacctgaagaacgagaaaaaaagcga
caatttgaaatgaaaaggaagcttcactacaatgaaggactcaatatcaaactagccaga
caattaatttcaaaagacctacatgatgatgatgaagatgaagaaatgttagagactgca
gatggagaaagcatgaatacggaagaatcaaatcaagatctggacacaaagcaaacttgc
tggattgtcaaggtacgcaaggatgcaagn

>gi568815595r:195468903_195679461|GENSCAN_predicted_peptide_2|190_aa
MCPPELATANPQAEQKPLTSMASLDGNDKLRQSNKSLTLSSLERGSLKALVLQGHVACSG
HYRPCTTEVMCAEQKRRPRERKEGLESCLENHLIKTPDNTAVSEAAVAAALALSGICGCL
RVSAVPTLLFADPTPSSDPEPTAGAPGNGGLDGLAPAHQGDLEEQDLYDFLYGGVGRTAP
RECRRGAEGY

>gi568815595r:195468903_195679461|GENSCAN_predicted_CDS_2|573_bp
atgtgtccacctgagctagcaacagccaatccacaggctgaacagaaacctctgacttct
atggcctcgctggatggaaatgataaactgagacaatcaaataagagtttgactttaagc
agtctggaaagaggatcattgaaagctctggtactgcaaggtcatgtggcttgtagtggc
cactaccggccatgcactactgaagtgatgtgtgcggaacagaaacgcaggccacgggag
cgcaaagagggtcttgagtcctgtctagagaaccacttgataaaaacacctgataacaca
gccgtttccgaggcagcagttgcggccgctttagccctgagcgggatctgcggctgcctg
cgagtctctgctgtgccgacccttctcttcgcggaccccacgccaagcagcgaccctgag
ccgacagccggagcgcccggcaatggcggcctcgacggcctcgcaccggcccatcaaggg
gatcttgaagaacaagacctctacgacttcctctatggtggcgtcggccgaacagccccg
cgggaatgtcgacgaggagctgagggatactga

>gi568815595r:195468903_195679461|GENSCAN_predicted_peptide_3|189_aa
MVMLLLLLSALAGLFGAAEGQAFHLGKCPNPPVQENFDVNKYLGRWYEIEKIPTTFENGR
CIQANYSLMENGKIKVLNQELRADGTVNQIEGEATPVNLTEPAKLEVKFSWFMPSAPYWI
LATDYENYALVYSCTCIIQLFHVDFAWILARNPNLPPETVDSLKNILTSNNIDVKKMTVT
DQVNCPKLS

>gi568815595r:195468903_195679461|GENSCAN_predicted_CDS_3|570_bp
atggtgatgctgctgctgctgctttccgcactggctggcctcttcggtgcggcagaggga
caagcatttcatcttgggaagtgccccaatcctccggtgcaggagaattttgacgtgaat
aagtatctcggaagatggtacgaaattgagaagatcccaacaacctttgagaatggacgc
tgcatccaggccaactactcactaatggaaaacggaaagatcaaagtgttaaaccaggag
ttgagagctgatggaactgtgaatcaaatcgaaggtgaagccaccccagttaacctcaca
gagcctgccaagctggaagttaagttttcctggtttatgccatcggcaccgtactggatc
ctggccaccgactatgagaactatgccctcgtgtattcctgtacctgcatcatccaactt
tttcacgtggattttgcttggatcttggcaagaaaccctaatctccctccagaaacagtg
gactctctaaaaaatatcctgacttctaataacattgatgtcaagaaaatgacggtcaca
gaccaggtgaactgccccaagctctcgtaa

>gi568815595r:195468903_195679461|GENSCAN_predicted_peptide_4|486_aa
MTTDDTEVPAMTLAPGHAALETQTLSAETSSRASTPAGPIPEAETRGAKRISPARETRSF
TKTSPNFMVLIATSVETSAASGSPEGAGMTTVQTITGSDPREAIFDTLCTDDISEEAKTL
TMDILTLAHTSTEAKGLSSESSASSDGPHPVITPSRASESSASSDGPHPVITPSRASESS
ASSDGPHPVITPSRASESSASSDGPHPVITPSRASESSASSDGLHPVITPSRASESSASS
DGLHPVITPSRASESSASSDGPHPVITPSWSPGSDVTLLAEALVTVTNIEVINCSITEIE
TTTSSIPGASDTDLIPTEGVKASSTSDPPALPDSTNTKPHITEVTASAETLSTAGTTESA
APDATIGTPLPTNSTIEREVTAPGATTLSGALATGNPLEETSALSVETPSYVKVSGAAPV
SIEAGSAVGKTTSFAGSSASSYSPLEAALKNFTPSETLTTDIATKGPFPTSRAPLPSVPP
TTTNSS

>gi568815595r:195468903_195679461|GENSCAN_predicted_CDS_4|1461_bp
atgacaacggacgacacagaagtgcccgctatgactctagcaccgggccacgccgctctg
gaaactcaaacgctgagcgctgagacctcttctagggcctcaaccccagccggccccatt
ccagaagcagagaccaggggagccaagagaatttcccctgcaagagagaccaggagtttc
acaaaaacatctcccaacttcatggtgctgatcgccacctccgtggagacatcagccgcc
agtggcagccccgagggagctggaatgaccacagttcagaccatcacaggcagtgatccc
agggaagccatctttgacaccctttgcaccgatgacatctctgaagaggcaaagacactc
acaatggacatattgacattggctcacacctccacagaagctaagggcctgtcctcagag
agcagcgcctcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagc
agcgcctcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagcagc
gcctcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagcagcgcc
tcttccgacggcccccatccagtcatcaccccgtcacgggcctcagagagcagcgcctct
tccgacggcctccatccagtcatcaccccgtcacgggcctcagagagcagcgcctcttcc
gacggcctccatccagtcatcaccccgtcacgggcctcagagagcagcgcctcttccgac
ggcccccatccagtcatcaccccctcatggtccccgggatctgacgtcactctcctcgct
gaagccctggtgactgtcacaaacatcgaggttattaattgcagcatcacagaaatagaa
acaacgacttccagcatccctggggcctcagacacagatctcatccccacggaaggggtg
aaggcctcgtccacctccgatccaccagctctgcctgactccactaacacaaaaccacac
atcactgaggtcacagcctctgccgagaccctgtccacagccggcaccacagagtcagct
gcacctgatgccacgattgggaccccactccccaccaacagcaccatagaaagagaagtg
acagcacccggggccacgaccctcagtggagctctggccacagggaatcccctggaagaa
acctcagccctctctgttgagacaccaagttacgtcaaagtctcaggagcagctccggtc
tccatagaggctgggtcagcagtgggcaaaacaacttcctttgctgggagctctgcttcc
tcctacagccccttggaagccgccctcaagaacttcaccccttcagagacactgaccacg
gacatcgcaaccaaggggcccttccccaccagcagggcccctcttccttctgtccctccg
actacaaccaacagcagctga

>gi568815595r:195468903_195679461|GENSCAN_predicted_peptide_5|941_aa
MVPERKNQEKESDDASTVNEETSEENNEMEESDVSQAEKDLLHSEGSENEGPESSGSSDC
RETEELVGSNSSKTGEILSESSMDNDDEATEVTDEPLEQDYLETFTCSILHTVLGPKTRT
SAPAWVASSTTLKLEHQIPTGLQLQGPQTGTSAPHQISSCTDLKLEHQLPAGSPAALPAN
WNMSSLPGLQLHGPQTGTSAPHQIASCTALKLEYQLHPGAPGAQPSTCNISSPLGLQMNG
PQPATSAPHRVSRCMALKLEHQLPTGCTASNCNISSPLGLQQHGPQPGTSAPPNPGLQLH
SPQPATLATNWVSRCMALKLEHQLHPRYPAAQPSNWNISSLPGLQVHGPQTGTSAPHQVS
SRTALILEHQLPTRSPAAQLSNRNISSPQGLQLHGSQTRTSAPHRVSSCTALNLQHWLPT
GSPDARPSNCNISSPRAYSCMALNWNISSPLGLQEHGPQTGTSAPCQVTSCMALKLEHHL
PARSPAAWPSNCNISSHQSLQLHGHQTGTSAPPRVSSCTDLKLEHQLPAGSSTAWPSNWN
ISSTPGSPVARPYNWNISFPLGLRLHSPTTGTSAPCRVSSCTALKLEHQLPAEFKLFQCT
AIKLEHQLPGPQTGTSAPRRISSCTAVNISSSPSPQLHDPQVRTSASPQVFSCVTLNLEH
QFLYRAVCLGPGVRNGQFFNTVSGSGRPEGSQALSPWRAFCGLSQGSRQEPGENRCVCSR
RALMPLRDTERPTVCFAGTVQCSQGKSCIRHAGAVAAPAENQSLIFGVRKVEAPSPNTIA
LGVRISTDEFRGTRTFKPSQSPTHQGESVWREDIREPPGLWSPWSVVLAYGSPTAPVRWE
ETADTMRRHHTLRRKPPGGLWGLRSVPGVPGSCLNAHSGSCPAASAPRPRPRAGSAPWCR
LGSVQGRAGCAEHLQAPPWVTEDRGADQVFYRSVGDQQLDA

>gi568815595r:195468903_195679461|GENSCAN_predicted_CDS_5|2826_bp
atggtcccagaaagaaaaaaccaagaaaaagaatctgatgatgcctcaactgtgaatgaa
gagacttctgaggaaaataatgaaatggaggaatctgatgtgtctcaagctgagaaagat
ttactacattctgaaggtagtgaaaacgaaggccctgaaagtagtggttcttctgactgc
cgtgaaacagaagaattagtaggatccaattccagtaaaactggagagattctttcagaa
tcatccatggataatgatgacgaagccacagaagtcaccgatgaaccactggaacaagac
tatttagaaacatttacatgcagtattttacacacagttctgggccctaaaactagaaca
tcagctcccgcctgggtcgccagcagcaccaccctcaaactggaacatcagatccccacg
ggtctccagctgcagggccctcaaactggaacatcagctccccaccagatctccagctgc
acggacctcaaactggaacatcagctccccgccgggtctccagctgcactgcctgcaaac
tggaacatgagctccctgcccggtctccagctgcatggccctcaaactggaacatcagct
ccccaccagattgccagctgcacggccctcaaactggaatatcagctccaccccggggct
ccaggtgcacagccctcaacctgcaacatcagctccccactgggtctccagatgaatggc
cctcaacctgcaacatcagctccccaccgggtctccagatgcatggccctcaaactggaa
catcagctccccaccggctgcaccgcctcaaactgcaacatcagctccccgctgggtctc
cagcagcatggccctcaacctggaacatcagctccccccaacccgggtctccaactccac
agccctcaacctgcaacactggctaccaactgggtctccagatgcatggccctcaaactg
gaacatcagctccacccccggtatccagctgcacagccctcaaactggaacatcagctcc
ctgccgggtctccaggtgcacggccctcaaactggaacatcagctccccaccaggtctcc
agccgcacggccctcatactggaacatcagctccccaccagatctccagctgcacagctc
tcaaacaggaacatcagctccccacagggtctccagctgcacggctctcaaacaagaaca
tcagctccccacagggtctccagctgcacggccctcaacctgcaacactggctccccacc
gggtctcccgatgcacggccctcaaactgcaacatcagttccccccgggcatacagctgc
atggccttaaactggaacatcagctccccgctaggtctccaggagcacggtcctcaaact
ggaacatcagctccctgccaggtcaccagctgcatggccctcaaactggaacatcacctc
cccgccaggtctccagctgcatggccctcaaattgcaacatcagctcccatcagagcctc
cagctgcatggccatcaaactggaacatcagctcccccgcgggtctccagctgcacagac
ctcaaacttgaacatcagctccccgccgggtcatcaactgcatggccctcaaactggaac
atcagctccacccctgggtctccagtagcacggccctacaactggaacatcagcttcccc
ctgggtctccggctgcacagccctacaaccggaacatcagctccctgccgggtctccagc
tgcacagccctcaaactggaacatcagctccccgctgagttcaaactattccagtgcacg
gccatcaaactggaacatcagctccccggccctcaaaccggaacatcagctccccgccgg
atctccagctgcacagctgtcaacatcagctcctccccgagtcctcagctgcacgaccct
caagttagaacatcagcttctccccaagtcttcagctgcgtgaccctcaatctagaacat
cagttcctctacagagccgtgtgtctagggcccggggtgcggaacgggcagttcttcaac
acagtgagcggcagcgggcgtcccgaaggttctcaggccttgtctccgtggagggcattt
tgtggcctctcccagggcagccggcaggagccaggcgagaacagatgcgtctgtagcagg
agggcgttgatgcctctgagagatacagagcgacccaccgtctgctttgctgggactgtc
cagtgttcgcagggaaagtcctgcatccggcacgctggggcggtggctgcaccagctgag
aaccagtctctgattttcggggtgagaaaagtagaggccccatctcctaacaccatcgcc
ttgggggtgaggatttcaacagatgaatttcggggaacacggacattcaaaccctcacaa
agccccacccaccaaggagagtctgtctggagagaagacattagggagccaccagggttg
tggagcccctggtctgtggtgctggcttatggcagccctactgccccagtgagatgggaa
gagacagcagacacaatgagaagacaccacacgctcaggcggaaaccccccgggggcctc
tgggggctgcggtcggtgccaggggtcccgggcagctgcctgaacgcgcacagcggctcc
tgccccgcagcctccgccccgcgcccgcgtcctcgggccggcagcgccccctggtgccgc
ctcgggtctgtgcagggccgggcgggctgcgcggagcacctgcaggcgcctccatgggtg
acggaagacagaggggctgaccaggtcttctacaggtcagtgggcgatcaacagctggac
gcgtag

>gi568815595r:195468903_195679461|GENSCAN_predicted_peptide_6|629_aa
MEKLMGPPMDQDSASTKTCPETHRKSGPRSREQHGALGAANAHDTVRDGERYDRRSRPRR
REQHGALGAANAHDTVRDGERRSLRRDWRDCAAATTDVSGVRGLSRLPSARRLALALAKA
ISAQYPVVDHEFDAVVVGINAALGNMEEDNWRWHFYDTVKGSDWLGDQDAIHYVTEQAPT
AMVEVENYGMPFSRTEDGKIYQRAFGGHSLKFGKGRQAHRCCCVADRTGHSILHTLYGRS
LRYDTSCFVEYFALDLLMENGECRGVFALCIQDGSIHRIRAKNTIVATGYENEGNPVMCD
NVDEPKVIMLSETTQAQKDRYCMSLICGSKTVTTHRNRIGQWLPGAGGMQTVAMLIKGVT
SRHKTGGPDVGHCVQSLLSVVSIGYGRTYLSCTSAHTSTSDGTAMITRAGLPCQDLEFVQ
FHPTGTYGAGCLITEGCRGEGGILINSQGERFMERYAPIAKDLASRDVVSRWMTLEIREG
RGCGPEKDHVYLQLHHLPPEQLAMPLPGISETAMIFAGVDVTKEPIPVLPTVHYNMDGIP
TSYEGQVLRHGNGQDQIVPSLYACGEAACASAHGVNRLGANSLLDLVVWSGMCPEHRRVV
QAWIASNNVQEKEYRVWECESYVHEEQDS

>gi568815595r:195468903_195679461|GENSCAN_predicted_CDS_6|1890_bp
atggagaagctcatgggacccccgatggaccaggacagtgccagcactaagacgtgccct
gaaactcacaggaagagcggaccaagaagccgggaacagcacggggcactgggagctgca
aacgcccacgatactgtgagagacggagaaaggtatgacaggaggagcagaccaagaaga
cgggaacagcacggcgcactgggagctgcaaatgcccacgataccgtgagagatggagaa
aggcgcagtctgcgcagggactggcgggactgcgcggcggcgactacagacgtgtcgggg
gtccggggcctgtcgcggttgccaagcgctcggcgcttggcgctggcgctggccaaggcg
atttctgctcagtatccagtagtggatcatgaatttgatgcagtggtggttggaatcaat
gctgctctggggaacatggaggaggacaactggaggtggcatttctatgacaccgtgaag
ggctccgactggctgggggaccaggatgccatccactacgtgacggagcaggcccccact
gccatggtcgaggtagaaaattatggcatgccgtttagcagaactgaagatgggaagatt
tatcagcgtgcatttggcggacacagcctcaagtttggaaagggcaggcaggcccatcgg
tgctgctgtgtggctgatcggaccggccactcaatattgcacaccttatatgggaggtct
ctgcgatatgataccagctgttttgtggagtattttgccttggatctcctgatggagaat
ggggagtgccgtggtgtcttcgcactgtgcatacaggacgggtccatccatcgcataaga
gcaaagaatactattgttgccacaggctatgaaaacgaaggaaatcctgtcatgtgtgac
aacgtggatgaacccaaagtcattatgttaagtgaaacgacccaggcacagaaagacaga
tactgcatgtcactcatatgtggatctaaaactgtcacaactcacagaaacagaatagga
cagtggttgccaggggctgggggaatgcagactgtggcgatgctgattaaaggtgtaact
tcccgtcacaagacaggaggtccggacgtgggccactgtgtgcagtcactgctctctgtt
gtttccataggctacgggcgcacctacttgagctgcacgtctgcccacaccagcaccagc
gacggcacggccatgatcaccagggcaggccttccttgccaggacctcgagtttgttcag
ttccaccccacaggcacatatggtgctggttgtctcattacggaaggatgtcgtggagag
ggaggcattctcattaacagtcaaggcgaaaggtttatggagcgatacgcccccatcgcg
aaggacctggcgtctagagatgtggtgtctcggtggatgactctggagatccgcgaagga
agaggctgtggccctgagaaagatcacgtctacctgcagctgcaccacctacctccagag
cagctggccatgcccttgcccggcatttcagagacagccatgatcttcgctggtgtggac
gtcacgaaggagccgatccctgtcctccccaccgtgcattataacatggacggcattccc
accagctacgaggggcaggtcctgaggcacgggaatggccaggatcagattgtgcccagc
ctgtacgcctgtggggaggccgcctgtgcctctgcacatggtgtcaaccgcctcggggca
aactcgctgttggacctggttgtctggtcaggcatgtgccctgagcatcgcagagtcgtg
caggcctggatagcgtcaaataatgtgcaggaaaaggaataccgtgtgtgggagtgtgag
tcttatgtgcacgaagaacaggacagttag