GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:25:11

Sequence gi568815595r:185317498_185518778 : 201281 bp : 41.18% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12988  13113  126  0  0   69   92    27 0.005   1.16
 1.02 Intr +  36359  36458  100  1  1   83   86    75 0.285   5.56
 1.03 Term +  36715  36956  242  2  2   64   44   100 0.263  -1.60
 1.04 PlyA +  37046  37051    6                               1.05

 2.03 PlyA -  40181  40176    6                               1.05
 2.02 Term -  46220  45779  442  1  1   62   43   182 0.564   4.84
 2.01 Init -  46423  46317  107  1  2   83   67    62 0.774   3.34
 2.00 Prom -  50987  50948   40                              -6.75

 3.03 PlyA -  51917  51912    6                               1.05
 3.02 Term -  60502  60300  203  2  2   69   47   193 0.599   9.87
 3.01 Init -  70955  70880   76  2  1   90   57    61 0.175   2.52
 3.00 Prom -  80331  80292   40                              -4.85

 4.04 PlyA -  81585  81580    6                               1.05
 4.03 Term - 100252  99998  255  1  0   26   37   372 0.078  20.50
 4.02 Intr - 101194 100589  606  1  0   28   75   677 0.059  52.12
 4.01 Init - 103354 103346    9  1  0   66   80     0 0.228  -2.53
 4.00 Prom - 109157 109118   40                              -6.95

 5.00 Prom + 110003 110042   40                              -6.75
 5.01 Init + 111085 111559  475  0  1  110  121   381 0.988  39.28
 5.02 Intr + 119950 120133  184  2  1   73   58   138 0.375   7.22
 5.03 Intr + 125948 126139  192  2  0   18   78   109 0.055   0.59
 5.04 Intr + 130292 130450  159  2  0   49  101   147 0.996  10.28
 5.05 Intr + 132403 132561  159  1  0   62   83   108 0.983   5.88
 5.06 Intr + 133790 133898  109  2  1   88  111   129 0.998  14.57
 5.07 Intr + 146053 146162  110  0  2   64   76   165 0.999  11.06
 5.08 Intr + 148250 148366  117  2  0   99   44   140 0.997   9.36
 5.09 Intr + 149329 149466  138  1  0  103   93   183 0.919  18.96
 5.10 Intr + 155478 156264  787  0  1  100   98   372 0.657  29.94
 5.11 Intr + 159829 159899   71  0  2  100   83   125 0.998  10.26
 5.12 Intr + 162735 163032  298  0  1  123   59   480 0.999  44.55
 5.13 Term + 164858 164959  102  1  0   86   39   117 0.923   3.90
 5.14 PlyA + 165155 165160    6                              -1.75

 6.09 PlyA - 165206 165201    6                               1.05
 6.08 Term - 165903 165853   51  0  0  121   48    62 0.077   1.95
 6.07 Intr - 168769 168645  125  2  2   25   58    82 0.036  -1.72
 6.06 Intr - 171550 171448  103  1  1   52  110    57 0.290   3.13
 6.05 Intr - 175091 174914  178  1  1   55   66   133 0.554   6.80
 6.04 Intr - 175268 175222   47  2  2   88   39    37 0.307  -4.91
 6.03 Intr - 177818 177657  162  2  0   88  116   105 0.963  12.55
 6.02 Intr - 179484 179331  154  2  1   87   65   182 0.919  14.95
 6.01 Init - 181464 181346  119  0  2   99   96   157 0.845  15.32
 6.00 Prom - 181998 181959   40                              -8.55

 7.00 Prom + 182118 182157   40                              -7.25
 7.01 Init + 184377 184520  144  2  0   19   61   138 0.487   4.37
 7.02 Intr + 185947 186086  140  0  2   89  110    98 0.678  10.44
 7.03 Intr + 188998 189071   74  1  2   81   67    65 0.871   1.83
 7.04 Term + 190547 190926  380  0  2   48   54   209 0.358   7.47
 7.05 PlyA + 192192 192197    6                               1.05

 8.04 PlyA - 192977 192972    6                               1.05
 8.03 Term - 194099 194018   82  1  1   84   55    79 0.764   0.39
 8.02 Intr - 197024 196913  112  0  1  122   89    90 0.961  11.02
 8.01 Intr - 199665 199570   96  1  0   67   73    54 0.631   0.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 125985 126139  155  2  2   54   78   125 0.882   7.60


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_1|155_aa
PLELINFSKSIASAGPSSSFTCWLRRRSGGLGGVLGKKPVWQVYLLVETDHNHTPPPPTP
NGHSIKEKKDLIQALGDLDVSLRDRTYLSAKGLLLPLCVNRGQQRASPGSLTCRLQTGAT
AIQVPREANAWGVYALPPFEAYRLGYRVMLSAALC

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_1|468_bp
cctcttgagctgattaacttctccaagtcaatagcttctgctgggccaagttcctcattt
acttgttggttgaggagaaggagtggagggctggggggtgtcctgggaaagaagccagtg
tggcaggtctacctccttgttgaaactgaccataaccacaccccgcccccgccaacccca
aatggtcattccatcaaagagaagaaagacttaattcaagctctgggggacttagatgtt
tccctaagggacaggacatatctatctgctaagggtctgctcctacctctctgtgtcaac
agagggcagcagagagcatcacccggtagcctaacctgtaggcttcaaaccggggcaacg
gcaatccaagtgcctagggaagcaaatgcctggggagtgtacgcattgcccccgtttgaa
gcctataggttaggctaccgggtgatgctctccgctgccctctgttga

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_2|182_aa
MAPVIRAFEKWLNKYSSSPNCNRKILTVTQYETKASTFLVFWAFLLIPSTSSLREMNLPL
RKAKQASEVTCRTVNEKCPRLAGRQAKENQLSVSEAPSCNGVSGFSPPLSLCLSHGVALN
NISFLITSNHTFSVCPCEINTEETGKTECNTHNNEEFLHMLFHFLALKRCKVNFKSLAEL
EK

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_2|549_bp
atggctcccgtcataagagcttttgaaaaatggttgaacaagtattcatcttcaccaaat
tgcaatcgcaagatactgactgttacacaatatgaaacaaaggcaagcacctttctggtg
ttctgggcttttctgctaataccatccacatcatctctcagagaaatgaatctcccttta
aggaaagccaagcaggcatccgaggtaacgtgcagaaccgtaaatgaaaaatgtccacgt
ctagcaggcagacaagcaaaggaaaaccagctgtcagtttcagaggctcctagctgtaac
ggggtttcgggtttctctccgcctctgtctctctgtctctctcacggtgtcgccctcaat
aatatcagctttctaatcacctcaaatcacacattctctgtctgtccttgtgaaataaat
actgaagaaacaggaaaaacagagtgcaatactcacaacaacgaagaattcctacacatg
ctgttccattttcttgctttgaaaagatgtaaggtgaattttaaaagccttgcagaattg
gaaaaataa

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_3|92_aa
MARYSLGLLGSSNAPISSSRVAGTTGACYKCRKSGHWAKECPQPGIPPKPCPICAGPHWK
SDCPTRPAATPRAPGTLAQGPFPDLLGLAAED

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_3|279_bp
atggctcgctacagcctcggcctcctgggctcaagcaatgctcccatctcatcctcccga
gtagctggaactacaggagcttgctacaagtgccggaaatctggccactgggccaaggaa
tgcccgcagcccgggattcctcccaagccatgtcccatctgtgcgggaccccactggaaa
tcggactgtccaactcgcccggcagccactcccagagcccctggaactctggcccaaggc
cccttcccagatcttctcggcttagcggctgaagactga

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_4|289_aa
MEEAPIRPDIVNFVHTNLRKNNRQPYAASELAGHQTSAESWGTGRAMARIPRVRGGGTHR
SGQGAFGNMCRGGRRFAPTKTWRRWHRRVNTTQKRYAICSALAASALPALVMSKGHRIEE
VPELPLVFEDKVEGYKKTKEAVLLLKKLKAWNDIEKVYASQRMRAGKGKMRNRRRIQRRG
LCIIYNEDNGIIKAFRNIPGITLLNARNHKLRVDKAAAAAAALPAKSDEKAAVAGKKPVV
GKKGKKAAVGVKKQKKPLVGKKAAATKKPAPEKKPAEKKPTTEEKKPAA

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_4|870_bp
atggaggaggctcctattcgaccagatattgtgaactttgttcacaccaacttgcgcaaa
aacaacagacagccctacgctgccagtgaattagcaggtcatcagaccagtgctgagtct
tggggtactggcagagctatggctcgaattcccagagttcgaggtggtgggactcaccgc
tctggccagggtgcttttggaaacatgtgtcgtggaggccgaaggtttgcaccaaccaaa
acctggcgccgttggcatcgtagagtgaacacaacccaaaaacgatatgccatctgttct
gccctggctgcctcagccctaccagcactggtcatgtctaaaggtcatcgtattgaggaa
gttcctgaacttcctttggtatttgaagataaagttgaaggctacaagaagaccaaggaa
gctgttttgctccttaagaaacttaaagcctggaatgatatcgaaaaggtctatgcctct
cagcgaatgagagctggcaaaggcaaaatgagaaaccgtcgccgtatccagcgcaggggc
ctgtgcatcatctataatgaggataatggtatcatcaaggccttcagaaacatccctgga
attactctgcttaatgccaggaatcacaagctccgggtggataaggcagctgctgcagca
gcagcactaccagccaaatcagatgaaaaggcggcggttgcaggcaagaagcctgtggta
ggtaagaaaggaaagaaggctgctgttggtgttaagaagcagaagaagcctctggtggga
aaaaaggcagcagctaccaagaaaccagcccctgaaaagaagcctgcagaaaagaaacct
actacagaggaaaagaagcctgctgcataa

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_5|966_aa
MANFQEHLSCSSSPHLPFSESKTFNGLQDELTAMGNHPSPKLLEDQQEKGMVRTELIESV
HSPVTTTVLTSVSEDSRDQFENSVLQLREHDESETAVSQGNSNTVDGESTSGTEDIKIQF
SRSGSGSGGFLEGLFGCLRPVWNIIGKAYSTDYKLQQQDTWEVPFEEISELQWLGSGAQG
AVFLGKFRAEEVAIKKVREQNETDIKHLRKLKHPNIIAFKGVCTQAPCYCIIMEYCAHGQ
LYEVLRAGRKITPRLLVDWSTGIASGMNYLHLHKIIHRDLKSPNVLVTHTDAVKISDFGT
SKELSDKSTKMSFAGTVAWMAPEVIRNEPVSEKVDIWSFGVVLWELLTGEIPYKDVDSSA
IIWGVGSNSLHLPVPSTCPDGFKILMKQTWQSKPRNRPSFRQTLMHLDIASADVLATPQE
TYFKSQAEWREEVKKHFEKIKSEGTCIHRLDEELIRRRREELRHALDIREHYERKLERAN
NLYMELSAIMLQLEMREKELIKREQAVEKKYPGTYKRHPVRPIIHPNAMEKLMKRKGVPH
KSGMQTKRPDLLRSEGIPTTEVAPTASPLSGSPKMSTSSSKSRYRSKPRHRRGNSRGSHS
DFAAILKNQPAQENSPHPTYLHQAQSQYPSLHHHNSLQQQYQQPPPAMSQSHHPRLNMHG
QDIATCANNLRYFGPAAALRSPLSNHAQRQLPGSSPDLISTAMAADCWRSSEPDKGQAGP
WGCCQADAYDPCLQCRPEQYGSLDIPSAEPVGRSPDLSKSPAHNPLLENAQSSEKTEENE
FSGCRSESSLGTSHLGTPPALPRKTRPLQKSGDDSSEEEEGEVDSEVEFPRRQRPHRCIS
SCQSYSTFSSENFSVSDGEEGNTSDHSNSPDELADKLEDRLAEKLDDLLSQTPEIPIDIS
SHSDGLSDKECAVRRVKTQMSLGKLCVEERGYENPMQFEESDCDSSDGECSDATVRTNKH
YSSATW

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_5|2901_bp
atggccaactttcaggagcacctgagctgctcctcttctccacacttacccttcagtgaa
agcaaaaccttcaatggactacaagatgagctcacagctatggggaaccacccttctccc
aagctgctcgaggaccagcaggaaaaggggatggtacgaacagagctaatcgagagcgtg
cacagccccgtcaccacaacagtgttgacgagcgtaagtgaggattccagggaccagttt
gagaacagcgttcttcagctaagggaacacgatgaatcagagacggcggtgtctcagggg
aacagcaacacggtggacggagagagcacaagcggaactgaagacataaagattcagttc
agcaggtcaggcagtggcagtggtgggtttcttgaaggactatttggatgcttaaggcct
gtatggaatatcattgggaaggcatattccactgattacaaattgcagcagcaagatact
tgggaagtgccatttgaggagatctcagagctgcagtggctgggtagtggagcccaagga
gcggtcttcttgggcaagttccgggcggaagaggtggccatcaagaaagtgagagaacag
aatgagacggatatcaagcatttgaggaagttgaagcaccctaacatcatcgcattcaag
ggtgtttgtactcaggccccatgttattgtattatcatggaatactgtgcccatggacaa
ctctacgaggtcttacgagctggcaggaagatcacacctcgattgctagtagactggtcc
acaggaattgcaagtggaatgaattatttgcacctccataaaattattcatcgtgatctc
aaatcacctaatgttttagtgacccacacagatgcggtaaaaatttcagattttggtaca
tctaaggaactcagtgacaaaagtaccaagatgtcatttgctggcacggtcgcatggatg
gcgccagaggtgatacggaatgaacctgtctctgaaaaagttgatatatggtcttttgga
gtggtgctttgggagctgctgacaggagagatcccttacaaagatgtagattcttcagcc
attatctggggtgttggaagcaacagcctccaccttccagttccttccacttgccctgat
ggattcaaaatccttatgaaacagacgtggcagagtaaacctcgaaaccgaccttctttt
cggcagacactcatgcatttagacattgcctctgcagatgtacttgccaccccacaagaa
acttacttcaagtctcaggctgaatggagagaagaagtgaaaaaacattttgagaagatc
aaaagtgaaggaacttgtatacaccggttagatgaagaactgattcgaaggcgcagagaa
gagctcaggcatgcgctggatattcgtgaacactatgagcggaagcttgagcgggcgaat
aatttatacatggaattgagtgccatcatgctgcagctagaaatgcgggagaaggagctc
attaagcgtgagcaagcagtggaaaagaagtatcctgggacctacaaacgacaccctgtt
cgtcctatcatccatcccaatgccatggagaaactcatgaaaaggaaaggagtgcctcac
aaatctgggatgcagaccaaacggccagacttgttgagatcagaagggatccccaccaca
gaagtggctcccactgcatcccctttgtccggaagtcccaaaatgtccacttctagcagc
aagagccgatatcgaagcaaaccacgccaccgccgagggaatagcagaggcagccatagt
gactttgccgcaatcttgaaaaaccagccagcccaggaaaattcaccccatcccacttac
ctgcaccaagctcaatcccaatacccttctcttcatcaccataattctctgcagcagcaa
taccagcagccccctcctgccatgtcccagagtcaccatcccagactcaatatgcacgga
caggacatagcaacctgcgccaacaacctgaggtatttcggcccagcagcagccctgcgg
agcccactcagcaaccatgctcagagacagctgcccggctcgagccctgacctcatctcc
acagccatggctgcagactgctggagaagttctgagcctgacaagggccaagctggtccc
tggggctgttgccaggctgacgcttatgacccctgccttcagtgcaggccagaacagtat
gggtccttagacataccctctgctgagccagtggggaggagccctgacctttccaagtca
ccagcacataatcctctcttggaaaacgcccagagttctgagaaaacggaagaaaatgaa
ttcagcggctgtaggtctgagtcatccctcggcacctctcatctcggcacccctccagcg
ctacctcgaaaaacaaggcctctgcagaagagtggagatgactcctcagaagaggaagaa
ggggaagtagatagtgaagttgaatttccacgaagacagaggccccatcgctgtatcagc
agctgccagtcatattcaacctttagctctgagaatttctctgtgtctgatggagaagag
ggaaataccagtgaccactcaaacagtcctgatgagttagctgataaacttgaagaccgc
ttggcagagaagctagacgacctgctgtcccagacgccagagattcccattgacatatcc
tcacactcggatgggctctctgacaaggagtgtgccgtgcgccgtgtgaagactcagatg
tctctgggcaagctgtgtgtggaggaacgtggctatgagaaccccatgcagtttgaagaa
tcggactgtgactcttcagatggggagtgttctgatgccacagttaggaccaataaacac
tacagctctgctacctggtaa

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_6|312_aa
MRPLLGLLLVFAGCTFALYLLSTRLPRGRRLGSTEEAGGRSLWFPSDLAELRELSEVLRE
YRKEHQAYVFLLFCGAYLYKQGFAIPGSSFLNVLAGALFGPWLGLLLCCVLTSVGATCCY
LLSSIFGKQLVVSYFPDKVALLQRKKRNGLSECSKPIGISGQPVQPARLLESSGFDDIFE
TVQNVNSTSFKKLFVNNGTSLFTLAVGYSEPNLGPTFGKQSFLFPLPFNTEREPASENNT
GSWGLTVQETRGEPVNPHKVYDDNSITDNQDENSKKTDQNYEVSGVGFLGRPSLKDEVVS
RQKGNELQGNGT

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_6|939_bp
atgcgcccgcttctcggcctccttctggtcttcgccggctgcaccttcgccttgtacttg
ctgtcgacgcgactgccccgcgggcggagactgggctccaccgaggaggctggaggcagg
tcgctgtggttcccctccgacctggcagagctgcgggagctctctgaggtccttcgagag
taccggaaggagcaccaggcctacgtgttcctgctcttctgcggcgcctacctctacaaa
cagggctttgccatccccggctccagcttcctgaatgttttagctggtgccttgtttggg
ccatggctggggcttctgctgtgctgtgtgttgacctcggtgggtgccacatgctgctac
ctgctctccagtatttttggcaaacagttggtggtgtcctactttcctgataaagtggcc
ctgctgcagagaaagaagagaaatggactatcagagtgttccaaaccaatcggaatctca
ggccagcctgttcagccagccagacttttggaatccagtggatttgatgacatctttgag
acagtacagaatgtgaatagtacttcttttaaaaaactgtttgtcaacaatggcacttct
ctctttactttggctgttgggtactcagaaccaaatttggggcccacttttggcaaacag
tcattcttgttcccattgccgttcaatacagagagggagccggcatcagaaaacaacact
gggagctggggactgacagtacaggagaccagaggggagccagttaatccacataaggtg
tatgatgacaatagcataacagataatcaagatgagaattcaaaaaaaactgatcaaaat
tacgaggtatcaggggtaggttttctaggaagaccatcactgaaagatgaagtggtcagc
aggcagaaaggaaatgagctacaaggaaatggcacttga

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_7|245_aa
MDEWMNTCSDEITCAKFTAVSAEQEQAFVCHHVRPCFFLCPSLPFDMQAAAAPIEATHLQ
HRPTQSDKGQLQSSVNCSPFPGTCWIGKQVGEKNRKENKKVTVLIKTQTNKTKKKPGLPV
PAAALLAVSPSPSPPAPPCSNSTLEKAEGQHVAFLPSLSKQPEREAGVDRERLSYCKLDK
PKCKSIFTFIKHLIDVAPMGFQKTLHRFLPPKPTQQPHEVDVSFVPFYVWELEECGTENA
ELSPR

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_7|738_bp
atggatgagtggatgaacacatgttcagatgaaatcacttgtgcaaagtttacagctgtt
agtgctgaacaggaacaagcctttgtctgccatcatgtgcggccatgctttttcctctgc
ccttcactgccattcgacatgcaggctgcagcagcccccatcgaggccactcatttacag
cacaggcccacacagtctgacaaaggacagctgcaatcctctgtcaactgcagtcctttc
ccaggcacatgctggattgggaaacaggtgggagaaaagaacaggaaagagaacaaaaaa
gtgactgtgctgatcaaaacacagaccaataaaactaagaagaaaccagggctgccggtc
ccagcagccgccctcttagctgtcagtccatccccatctcctccagctcctccatgctcc
aacagcactttagagaaggcagagggccagcacgtggctttcttgccttccctgagcaaa
cagcccgagagagaagctggtgttgatagagagaggctctcttattgcaaattagataag
cccaaatgtaaaagcatattcacatttatcaaacatctcatagatgtggcacctatggga
tttcaaaaaacccttcatagatttttgcctcccaaacccacacagcagccccatgaggta
gacgtcagtttcgttcccttctacgtgtgggaactggaggaatgtggcacggagaatgca
gagttgagtccacggtga

>gi568815595r:185317498_185518778|GENSCAN_predicted_peptide_8|96_aa
XYYADNWKDHLRGKDPPMTKAFFDTAEESPFCMYHYFVDIITWNKNVRRGDITIKLRDKA
GNTTESKINQISNRPKVQAQDSPNEVKVPCPSGEVS

>gi568815595r:185317498_185518778|GENSCAN_predicted_CDS_8|291_bp
ngctattatgctgataattggaaagaccatctaagggggaaagatcctccaatgacgaag
gcattctttgacacagctgaggagagcccattctgcatgtatcattactttgtggatatt
ataacatggaacaagaatgtaagaagaggggacattaccatcaaattgagagacaaagct
ggaaacaccacagaatccaaaatcaatcagatctctaataggcccaaggtacaagctcag
gattctccgaatgaagttaaggtcccttgcccatccggagaggtgagctga