GENSCAN 1.0	Date run:  6-Nov-116	Time: 12:00:33

Sequence gi568815595r:112366111_112599358 : 233248 bp : 38.16% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2332   2446  115  1  1   26   75    90 0.327   1.03
 1.02 Term +   3493   3657  165  0  0   22   42   208 0.908   6.53
 1.03 PlyA +   3694   3699    6                               1.05

 2.00 Prom +   4963   5002   40                              -3.45
 2.01 Init +   7967   8015   49  1  1   49   94    51 0.412   2.96
 2.02 Term +   9431   9741  311  0  2   86   42   104 0.209  -0.16
 2.03 PlyA +  11387  11392    6                               1.05

 3.03 PlyA -  14526  14521    6                               1.05
 3.02 Term -  15416  15291  126  2  0   83   44   121 0.912   4.50
 3.01 Init -  15846  15796   51  0  0   47   98    42 0.558   2.31
 3.00 Prom -  16472  16433   40                              -6.65

 4.00 Prom +  19198  19237   40                              -4.45
 4.01 Sngl +  22947  23384  438  2  0   67   48   293 0.979  19.21
 4.02 PlyA +  23536  23541    6                               1.05

 5.00 Prom +  30875  30914   40                              -5.55
 5.01 Init +  33487  33573   87  0  0   39   96    78 0.626   4.39
 5.02 Intr +  34003  34095   93  0  0  105   85    32 0.767   3.84
 5.03 Term +  34674  34748   75  2  0   83   48    83 0.782   0.66
 5.04 PlyA +  35474  35479    6                               1.05

 6.02 PlyA -  35920  35915    6                               1.05
 6.01 Sngl -  47923  47591  333  1  0   44   43   267 0.969  13.57
 6.00 Prom -  55261  55222   40                              -3.95

 7.11 PlyA -  56866  56861    6                               1.05
 7.10 Term -  65893  65666  228  1  0  110   44   132 0.596   6.65
 7.09 Intr -  71240  71170   71  0  2   56  105    18 0.002  -1.72
 7.08 Intr -  71495  71312  184  2  1   54   55   125 0.003   4.24
 7.07 Intr -  93907  93725  183  1  0   76   50    88 0.364   2.86
 7.06 Intr - 100273 100010  264  1  0  121   28   116 0.851   5.69
 7.05 Intr - 103694 103648   47  0  2  137  107    26 0.964   6.61
 7.04 Intr - 105263 105102  162  0  0   56   98    39 0.539   0.73
 7.03 Intr - 113659 113345  315  2  0   95  109   168 0.990  14.71
 7.02 Intr - 133360 133335   26  0  2  114   65    35 0.011   0.55
 7.01 Init - 151317 151178  140  0  2   64   51    76 0.069   1.16
 7.00 Prom - 153057 153018   40                              -2.65

 8.12 PlyA - 153898 153893    6                               1.05
 8.11 Term - 158997 158761  237  0  0   43   47   184 0.045   4.98
 8.10 Intr - 168227 168143   85  1  1  102   55    59 0.431   2.90
 8.09 Intr - 170492 170365  128  2  2   78   62    89 0.628   3.86
 8.08 Intr - 171780 171625  156  0  0  100   83   166 0.978  16.59
 8.07 Intr - 172070 172036   35  0  2   88   68    44 0.635  -0.58
 8.06 Intr - 182530 182423  108  2  0   83  110   109 0.932  11.94
 8.05 Intr - 190706 190616   91  2  1   45   74    11 0.199  -5.95
 8.04 Intr - 192307 192266   42  1  0  104  105    27 0.677   3.52
 8.03 Intr - 195419 195347   73  1  1   51  121    92 0.771   7.29
 8.02 Intr - 196004 195736  269  2  2   41   57   323 0.415  19.91
 8.01 Init - 201637 201635    3  1  0   84   80     0 0.468  -1.15
 8.00 Prom - 201765 201726   40                              -5.55

 9.00 Prom + 205610 205649   40                              -4.65
 9.01 Init + 205684 205740   57  0  0   81  100     2 0.556   2.06
 9.02 Intr + 207779 207846   68  1  2  134  100   -39 0.596  -1.32
 9.03 Intr + 214595 215216  622  2  1   97   98   218 0.655  15.05
 9.04 Term + 216561 216626   66  2  0  101   36    85 0.960   1.56
 9.05 PlyA + 218595 218600    6                               1.05

10.03 PlyA - 219684 219679    6                               1.05
10.02 Term - 220382 220246  137  0  2  151   37   115 0.990   9.90
10.01 Init - 233180 233045  136  2  1   52   78   102 0.927   5.95

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_1|93_aa
XGYTIADNQVEMILSSHLWQHHFFLYDQTIPAHGLNWMQLIVKQSQEGPSGSIPGESIII
GDDNSLDVIASEDLSVGRDVEVEESDIDDPDLV

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_1|282_bp
nnaggatacactattgcagacaatcaagttgaaatgatactctcttcacacctctggcag
catcacttcttcctctatgaccagactattcctgctcatggcttgaactggatgcagtta
attgtaaaacaatctcaggaaggtccttcaggaagtattccaggagaaagcattattata
ggagacgacaattctttggatgttattgcctctgaagatctttcagtgggacgagatgtg
gaggtggaagagagtgatattgatgatcctgaccttgtgtag

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_2|119_aa
MWPHAEEHLEPSKAGGVKQESSLIPLEGHMMGVARLFSHQHSSNPLGEGEHTDRQVKEPK
WSVLQCALLALPSTNGLGVNQLSGLSAFLQGQRGSSTAFCVLSSCPASWKNQVTHGLEG

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_2|360_bp
atgtggccacacgctgaggaacatctggagccatcaaaagctggaggagtgaaacaggag
agttccctgatccccctcgaaggacatatgatgggtgtggctcgcctgttcagtcaccag
cactcctcaaaccccttaggggagggggagcacacagacaggcaggtgaaggagcctaag
tggagtgtgttacaatgtgcccttttagccttgccatccacgaatggcttgggtgttaat
cagctcagtggactctctgcctttctgcaagggcagaggggcagttcaacagctttctgt
gtcctgagctcttgcccagcatcttggaaaaatcaggtcacacacgggcttgaaggatga

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_3|58_aa
MISFDSRSHIEVTLMKKAQYHMEAAKSWGLHPLKPQPELYVGPFQPQLEQLGCRAPSP

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_3|177_bp
atgatctcctttgattccaggtctcacatcgaggtcacgctgatgaaaaaggctcaatac
cacatggaagctgccaagtcttggggcttgcaccctctgaagccacagcccgagctctat
gttggcccctttcagccacagctggagcagctgggatgcagagcaccaagtccctag

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_4|145_aa
MPQKIFTSKEEKQAPGFKAGRDRLMLLFCAKAVGFVIRAVPIYKATNTQTLKENKTPAVS
LLAVLQQEGPENENSFSDWFYQCFVPEIGKYFASKGLFYKVILILDNVPGHLELYEFYTK
GIKVVYLATNSASVIQRRSGDHKDL

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_4|438_bp
atgccacaaaagatatttactagtaaggaagaaaagcaagcaccaggatttaaggcagga
agggataggctaatgctattgttttgtgcaaaagcagttgggtttgtgatcagggctgtc
cctatctataaagctactaacacccaaaccttgaaggaaaataaaacaccagctgtcagt
ctcttggctgtattacaacaagaaggcccagaaaatgagaactctttttctgattggttc
tatcaatgctttgttcctgaaattgggaagtactttgccagtaaagggcttttttataaa
gttattttgatattggacaatgtccctggccacctagaactctacgagttctacaccaaa
ggcatcaaagtggtctatttggccacaaactcagcatctgtaattcagcggagatcgggg
gatcataaggacctttaa

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_5|84_aa
MNIGSVRKGGTTQSKSGTTPGKEGDSGSQTQPACTQVIKTFIAHTKPVWWSLHMDAHEIQ
LLQAIWAYTCKSQGMRWLGLGSEA

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_5|255_bp
atgaacattggttcagtccggaaaggtgggacaactcaaagcaaaagtgggacaactcca
ggcaaggaaggggattccgggtcacagactcagcccgcctgcacccaggtgattaaaacc
tttattgctcacacgaagcctgtttggtggtctcttcacatggacgcgcatgaaattcag
ttacttcaggccatctgggcgtatacgtgcaagtcacaggggatgcgatggcttggcttg
ggctcagaggcctga

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_6|110_aa
MNKEKELWEFQQQYADLCGVSIFPPVALPKQAASPNQSPLIQPCLSVKVLQLALPNDGAH
SVALPDQRVQTVALSYQGAQPAALPDQGALPAPCSIREHDQQPQLNAEPS

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_6|333_bp
atgaacaaagaaaaagagttgtgggaatttcagcagcagtatgcagatctttgtggagtc
tccatatttccaccagttgccttacccaaacaggcagcctcgcccaaccagagtccactc
atccagccctgcctaagtgtgaaggtcctccaactggccctacccaatgatggagcacac
tcagtggctctacctgaccagagagtccagacagtagccctctcataccagggagcccag
ccagcagccctgccggatcagggggcacttccagcaccctgctcaatcagggagcatgac
cagcagccccaactgaatgcagagcctagctag

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_7|539_aa
MGYYAAIKRNKIMSFAGTWLDLEAIILSKLTQEQKTKGHMFSLISGSYFTDATGVGKESC
DVQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKN
ISFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTAFTNIPDVKSASERPSKDEM
ASRPWLLYRLLPLGGLPLLITTCFCLFCCLRRHQGKQNELSDTAGREINLVDAHLKSEQT
EASTRQNSQVLLSETGIYDNDPDLCFRMQEGSEVYSNPCLEENKPGIVYASLNHSVIGPN
SRLARNVKEAPTEYASICMRVRDITTTSLPLMQDVLSEVNVVKRVRSSAHHTSMLNQSSF
CKEKPARGQIIGGPYIKAKALWAAGFPHVLAVAGIQVTPFLDRPCRRRHNSFPSAQEPEY
LIPQSVLGVGHLSCLGTAKAREHGALPTCRVQAGEGLLCWKPKLAQHHMEAAKAWDLYPL
KPWSKLYVVPFQPRIEQLGHRAQRPQTFHSTGTLGLGPRNYFFLLGLQACDGTNCHEDL

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_7|1620_bp
atgggatactatgcagccataaaaaggaacaagatcatgtcctttgcaggaacatggttg
gatctggaagccattatcctcagcaaactaacacaggaacagaaaaccaaaggccacatg
ttctcacttataagtgggagttatttcacagatgccactggggtagggaaagaatcatgt
gatgtacagctttatataaagagacaatctgaacactccatcttagcaggagatcccttt
gaactagaatgccctgtgaaatactgtgctaacaggcctcatgtgacttggtgcaagctc
aatggaacaacatgtgtaaaacttgaagatagacaaacaagttggaaggaagagaagaac
atttcatttttcattctacattttgaaccagtgcttcctaatgacaatgggtcataccgc
tgttctgcaaattttcagtctaatctcattgaaagccactcaacaactctttatgtgaca
gcatttactaacattccagatgtaaaaagtgcctcagaacgaccctccaaggacgaaatg
gcaagcagaccctggctcctgtatcgtttacttcctttggggggattgcctctactcatc
actacctgtttctgcctgttctgctgcctgagaaggcaccaaggaaagcaaaatgaactc
tctgacacagcaggaagggaaattaacctggttgatgctcaccttaagagtgagcaaaca
gaagcaagcaccaggcaaaattcccaagtactgctatcagaaactggaatttatgataat
gaccctgacctttgtttcaggatgcaggaagggtctgaagtttattctaatccatgcctg
gaagaaaacaaaccaggcattgtttatgcttccctgaaccattctgtcattggaccgaac
tcaagactggcaagaaatgtaaaagaagcaccaacagaatatgcatccatatgtatgagg
gtcagagatataactacaacctccttgcctttgatgcaagacgttctttcagaggttaat
gtggttaaaagggtgagaagctctgcccatcacaccagtatgttaaatcaatcctctttc
tgtaaggagaagcctgcaagagggcagatcataggaggaccttatatcaaagctaaagca
ctctgggcagcagggtttcctcacgtactggctgtggctggcattcaggtcacacccttc
ctggatcggccctgtagaaggaggcacaactcattcccgtcagcccaagaacctgagtat
ctcatccctcaaagtgttctgggagtagggcacctctcctgcttgggcactgccaaagcc
agggaacacggggctttgcccacctgcagagttcaggcaggagaggggctgctgtgctgg
aagcccaagctggctcaacaccacatggaagccgccaaggcttgggacttgtatcctctg
aagccatggtccaagctctatgttgtaccctttcagccacggatagagcagctgggacac
agggcacaaagaccccagactttccacagcacagggaccctgggactgggcccacgaaac
tactttttccttctaggcctccaggcctgtgatgggacaaactgccatgaagacctctga

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_8|408_aa
MNKNHDYVRIGKKRTRHPLRRHVQCYASGRRGEAAYPAPARPLSHVTCRESLVSREAPVA
AQLRQESEKEGKPEGARVKQSEDRQLAEGEGMQNVINTVKGKALEVAEYLTPVLKESKFK
ETGVITPEEHLFNKAHLAPPLIHSTLSGHSTCFREHRVGVPCYKRCKQMEYSDELEAIIE
EDDGDGGWVDTYHNTEYEESGLLETDEATLDTRKIVEACKAKTDAGGEDAILQTRTYDLY
ITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIENHPHLPPPPMCSVHP
CRHAEVMKKIIETVAEGGGELGVHMYPSLYGLSEDPELQPVLAGLSLSMYLVTVLRNLLI
ILAVSSDSHLHTPMYFFLSNLSWADIGFTSAMVPKMIVDMQSHSRVIS

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_8|1227_bp
atgaacaaaaaccacgattacgtccggattgggaaaaagcggacccgacacccattgcgc
aggcacgttcagtgttacgcttccggaaggaggggagaagcggcttatcccgccccagcc
cggcccctttctcacgtcacgtgccgggagagtctagtgtcacgtgaggccccggtggcg
gcgcagctacggcaagagagtgagaaggaagggaagccggaaggggcgcgagtgaagcaa
agcgaggacagacagctcgcagagggcgaggggatgcagaatgtgattaatactgtgaag
ggaaaggcactggaagtggctgagtacctgaccccggtcctcaaggaatcaaagtttaag
gaaacaggtgtaattaccccagaagagcatctgtttaacaaagcacatcttgcaccaccc
ttaatccattcaaccctgagtggacacagcacatgtttcagagagcacagggttggggtg
ccgtgctataagcggtgcaaacagatggaatattcagatgaattggaagctatcattgaa
gaagatgatggtgatggcggatgggtagatacatatcacaacacagaatatgaagagagt
ggattgttggaaacagatgaggctaccctagatacaaggaaaatagtagaagcttgtaaa
gccaaaactgatgctggcggtgaagatgctattttgcaaaccagaacttatgacctttac
atcacttatgataaatattaccagactccacgattatggttgtttggctatgatgagcaa
cggcagcctttaacagttgagcacatgtatgaagacatcagtcaggatcatgtgaagaaa
acagtgaccattgaaaatcaccctcatctgccaccacctcccatgtgttcagttcaccca
tgcaggcatgctgaggtgatgaagaaaatcattgagactgttgcagaaggagggggagaa
cttggagttcatatgtatccttccctgtatggactctcagaggatccagaactgcagccc
gtcctcgctgggctgtccctgtccatgtacctggtcacggtgctgaggaacctgctcatc
atcctggctgtcagctctgactcccacctccacacccccatgtacttcttcctctccaac
ctctcctgggctgacattggtttcacctcggccatggttcccaagatgattgtggacatg
cagtcgcatagcagagtcatctcttaa

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_9|270_aa
MIQLSPPGLALDIWGLQFKAMAVIFSNFSIITTALLFRIVLKSECPRKDNCTAKEWTFPE
AKWNTTARVFSHIRLGMGHVLIIVQCFISSMANIYNEKILKEGNQLTESIFIQNSKLYFF
GILFNGLTLGLQRSNRDQIKNCGFFYGHSAFSVALIFVTAFQGLSVAFILKFLDNMFHVL
MAQVTTVIITTVSVLVFDFRPSLEFFLEAPSVLLSIFIYNASKPQVPEYAPRQERIRDLS
GNLWERSSGDGEELERLTKPKSDESDEDTF

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_9|813_bp
atgattcagttatctccacctggcttggcccttgacatatggggattacaattcaaggcc
atggctgttatcttctcaaattttagcattataacaacagctcttctattcaggatagtg
ctgaaaagtgagtgtcccagaaaagacaattgtacagcaaaggaatggacttttcctgaa
gctaaatggaacaccacagccagagttttcagtcacatccgtcttggcatgggccatgtt
cttattatagtccagtgttttatttcttcaatggctaatatctataatgaaaagatactg
aaggaagggaaccagctcactgaaagcatcttcatacagaacagcaaactctatttcttt
ggcattctgtttaatgggctgactctgggccttcagaggagtaaccgtgatcagattaag
aactgtggatttttttatggccacagtgcattttcagtagcccttatttttgtaactgca
ttccagggcctttcagtggctttcattctgaagttcctggataacatgttccatgtcttg
atggcccaggttaccactgtcattatcacaacagtgtctgtcctggtctttgacttcagg
ccctccctggaatttttcttggaagccccatcagtccttctctctatatttatttataat
gccagcaagcctcaagttccggaatacgcacctaggcaagaaaggatccgagatctaagt
ggcaatctttgggagcgttccagtggggatggagaagaactagaaagacttaccaaaccc
aagagtgatgagtcagatgaagatactttctaa

>gi568815595r:112366111_112599358|GENSCAN_predicted_peptide_10|90_aa
MRGKGPAVTEINEMIHRNGYHEKATGLGKTGCLSLPCHVLTCVTGGKVDVHGKNQNIGKG
KRSQGGYGLFNRAYWVYKEKQKDSLQIYPV

>gi568815595r:112366111_112599358|GENSCAN_predicted_CDS_10|273_bp
atgaggggcaaagggccagctgtcacagaaatcaatgaaatgatacacagaaatgggtat
catgaaaaggccactggacttgggaaaactgggtgcctgtccttgccctgccatgtactt
acctgtgtgactggaggaaaggtagatgttcatgggaaaaatcagaatataggtaaagga
aaaaggagccaaggaggatatggcctatttaatcgagcctattgggtctataaagaaaag
caaaaagattctctgcagatctacccagtctag