GENSCAN 1.0	Date run:  4-Aug-121	Time: 20:39:42

Sequence gi568815595f:98668441_98893758 : 225318 bp : 38.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Sngl +  14805  15491  687  2  0   34   43   384 0.627  24.44
 1.02 PlyA +  16349  16354    6                               1.05

 2.00 Prom +  19095  19134   40                              -4.85
 2.01 Init +  21968  21975    8  1  2  114   68     0 0.326   1.15
 2.02 Term +  30880  31006  127  1  1   83   36   123 0.905   3.37
 2.03 PlyA +  31070  31075    6                               1.05

 3.00 Prom +  41469  41508   40                              -4.95
 3.01 Init +  45622  45713   92  0  2   29   52   138 0.022   4.32
 3.02 Intr +  64433  64571  139  2  1   47   76   103 0.214   4.55
 3.03 Intr +  64662  65151  490  2  1   87  113   165 0.197  10.55
 3.04 Intr + 101885 102058  174  0  0    9   84   116 0.051   2.29
 3.05 Intr + 105480 105543   64  1  1   89   89    67 0.202   3.76
 3.06 Intr + 112739 112829   91  2  1   73   51    47 0.197  -1.42
 3.07 Intr + 114145 114569  425  0  2   88  -26   324 0.029  12.74
 3.08 Intr + 116505 116600   96  0  0   77   94    65 0.155   4.21
 3.09 Intr + 119596 119782  187  1  1   74   92   109 0.505   8.67
 3.10 Intr + 119886 120023  138  2  0   89   91    81 0.996   8.24
 3.11 Intr + 123401 123553  153  1  0   92   85    66 0.952   6.05
 3.12 Term + 128005 128037   33  0  0  120   43    25 0.258  -2.19
 3.13 PlyA + 128187 128192    6                               1.05

 4.10 PlyA - 129359 129354    6                               1.05
 4.09 Term - 131401 130932  470  2  2   82   49   430 0.998  32.65
 4.08 Intr - 132276 132139  138  1  0   -2   93   160 0.209   7.01
 4.07 Intr - 133209 133160   50  2  2  106   93    47 0.047   4.41
 4.06 Intr - 135932 135701  232  0  1   46   72    82 0.001  -1.69
 4.05 Intr - 143114 143028   87  0  0   49   91    82 0.874   3.62
 4.04 Intr - 144042 143892  151  0  1   50   98   130 0.982   9.01
 4.03 Intr - 149453 149329  125  0  2   75   93   132 0.474  11.78
 4.02 Intr - 150977 150762  216  0  0   90   42   151 0.424   8.25
 4.01 Init - 164937 164709  229  0  1   59   37   149 0.058   5.48
 4.00 Prom - 175225 175186   40                              -4.65

 5.00 Prom + 188124 188163   40                              -2.85
 5.01 Init + 188481 188574   94  2  1   30   73    75 0.641   0.80
 5.02 Intr + 188684 188848  165  0  0   27   44   133 0.465   1.81
 5.03 Term + 189415 190058  644  2  2   51   42   296 0.617  14.64
 5.04 PlyA + 190060 190065    6                               1.05

 6.00 Prom + 192740 192779   40                              -6.15
 6.01 Init + 193346 193847  502  1  1   62   72   196 0.752  10.63
 6.02 Term + 194199 194704  506  1  2   36   36   154 0.388  -1.38
 6.03 PlyA + 195188 195193    6                               1.05

 7.04 PlyA - 195975 195970    6                               1.05
 7.03 Term - 198795 198086  710  1  2   75   47   159 0.077   3.18
 7.02 Intr - 213327 213100  228  1  0   84   63   183 0.966  12.32
 7.01 Intr - 224166 224057  110  2  2   93   96    14 0.057   1.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 114145 114606  462  0  0   88   42   344 0.939  23.87
S.002 Sngl - 136572 136150  423  0  0   73   48   194 0.948   9.94
S.003 Sngl - 198868 198086  783  1  0   82   47   188 0.899   9.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_1|228_aa
MDQAEEKMSEIEDQLNEMKCEDKIREKRMKSNNQNLQDIWDYVKRPNLRFTGVPETDGEN
GIKLENTLQDIIQENFPNLARQANIQIQEIQRTPQRYSSRRVTPRHIIFIFTKVEMKEKM
LIAAREKDQVTHRGKPIRLTADLSAETLQARREWGPIFNILKEKNFQHRISYPAKLSFIS
KGEIKSFTDKQMVRDFVTTRPTLQELLKEALNMERKNQYQPLQKHIKL

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_1|687_bp
atggatcaagcagaagaaaagatgtcagagattgaagatcaacttaatgagatgaagtgt
gaagacaagattagagaaaaaagaatgaaaagcaacaaccaaaacctacaagatatatgg
gactatgtgaaaagaccaaacctacgttttactggtgtgcctgaaactgacggggagaat
ggaatcaagttggaaaacactcttcaggatattatccaggagaacttccccaacctagca
agacaggccaacattcaaattcaggaaatacagagaacaccacaaagatactcctcgaga
agagtaaccccaagacacataatcttcatattcaccaaggttgaaatgaaggaaaaaatg
ttaatagcagccagagagaaagatcaggttacccacagagggaagcccatcagactaaca
gcagatctctctgcagaaaccctacaagccagaagagagtgggggccaatattcaacatt
cttaaagagaagaattttcaacacagaatttcatatccagccaaactaagcttcataagc
aaaggagaaataaaatcctttacagacaagcaaatggtgagagattttgtcaccaccagg
cctaccttgcaagagctcctgaaggaagcactaaatatggaaaggaaaaaccagtaccag
ccactgcaaaaacatatcaaattgtaa

>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_2|44_aa
MPREYLLDDKRCVSQPPLSPSQQLINLQEQSCQSKFYLLRGTLN

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_2|135_bp
atgcccagggaatacctgctggatgacaagagatgtgtgtcccaaccaccgctgtcaccc
agccaacagctgatcaaccttcaggagcagagctgtcagagcaagttttacctgctcaga
ggcactctgaactaa

>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_3|693_aa
MSVGSGGVVAVLSCLVPGPKMIRAGEYRAGERRERGSSRLEQRPLRSRSPVRLCGRRSWA
SAGHSCRPASLRVCTARPLRLRVGGGDTERCLPLHISCQHQGGGVRRRKGTMGAGTREPA
GVRRSHRREGTRGSWSPSEGREGRAASRVSPGAVGAERICSGTLFCRIAGEVVQLGSQEE
CPAPRSLLFSCKRVCTRGGLRGLEGSGLLPYKVFRETLFPSTMELDLTKQAPRQFRRKED
GAHKGLTYAKNREELEMTLNSVICRVPRIPRQGSMEPVQVRCFCGVRCRCASADVAGGAE
YFRLALSKLQSCDLFDEFDKDMDEAGNYHSQQTNTGTENQTLHVLTHKWEHCPWGHPNQY
SNPAGLSSENISNFNNTLRYHIAGISKTAASREEANGVSIDHVQPPSGLIINKESEVYKM
LQEKQELNEPLKQSTSFLILQEILESEIKGDLNNPQDSEVLLSSVYYSVAASIGNAQKVP
MCDKCGPGIVGIIPCKKCVVVGNGGVLKNKTLGEKIDSYDVIIRMNNGPVLGHEEEVGRR
TTFRLFYPESVFSDPIHNDPNTTVILTAFKPHDLRWLLELLMGDKINTNGFWKKPALNLI
YKPYQIRILDPFIIRTAAYELLHFPKVFPKNQKPKHPTTGIIAITLAFYICHEVHLAGFK
YNFSDLKSPLHYYGNATMSLMNKVTMQSQGKGV

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_3|2082_bp
atgtcagtgggctctggaggtgtagtggccgtcctgagttgcctggtacctggccccaag
atgattagagcaggggaatatcgggcaggagagcgccgcgagagaggcagcagccggctg
gagcagcggcccctcaggtctcggagcccggtgcgcctctgcggtcgtcgctcctgggcc
tcggcgggtcactcttgccggccggcttcgctgcgggtttgcactgcccggcctctgagg
ctcagggttgggggtggggacacggagcgctgtttgcccctccacatatcctgccagcac
caaggaggtggcgtgcggaggcgtaaagggaccatgggcgctgggacccgcgagccagcc
ggcgtgcgccgcagccaccgccgagagggcacccggggatcctggagccccagtgaaggg
cgggagggacgcgcagcctcgcgggtaagcccaggagccgtgggggccgagagaatctgc
tctgggaccctcttttgtcgaatcgccggcgaggttgtgcaattgggaagccaagaggag
tgtccagctcctcgttcactattgttttcttgtaaaagggtctgtacgcgaggagggttg
aggggtctggaaggttctggtctcttaccgtataaagtttttcgagaaaccctttttccc
tccacaatggaactagacctaacaaaacaagctccgaggcagtttaggagaaaggaggac
ggagcacacaagggcctaacttatgccaagaatagagaagagttagaaatgactctcaat
agtgtgatttgtagagtcccccggatcccaaggcaagggtctatggaacctgttcaggtc
aggtgtttctgtggtgttcgctgccggtgtgcgtcagcagatgtggcaggaggagcggaa
tattttcgacttgctctttcaaaactgcagagttgtgatctctttgatgagtttgacaag
gacatggatgaagctggaaactatcattctcagcaaactaacacaggaacagaaaaccaa
acactgcatgttctcactcataagtgggagcactgtccctggggtcatccaaaccagtac
agtaacccagctggcctctcttctgaaaacatctccaacttcaacaatactttgagatac
catattgctggtatttcaaaaactgctgccagcagggaggaggccaatggcgtgtccata
gatcatgttcagcctccaagtggtctcataatcaacaaagaatctgaagtttacaagatg
cttcaggagaaacaggagttgaatgaacccctgaaacagtctacctctttcctgattttg
caggaaatcctggagtctgagataaaaggggatctcaacaaccctcaggattcagaagtg
ttactcagctcagtctattactcagtggctgcatcaattggaaatgctcagaaggtgccc
atgtgtgacaaatgtggtcctggcattgtaggcatcataccctgtaaaaagtgtgtggtg
gttggtaatggaggagttttgaagaataagacattaggagaaaaaatcgactcctatgat
gtaataataagaatgaataatggtcctgttttaggacatgaagaagaagttgggagaagg
acaaccttccgacttttttatccagaatctgttttttcagatcctattcacaatgaccct
aatacgacagtgattctcactgcttttaagccacatgatttaaggtggctgttggaattg
ttgatgggtgacaaaataaacactaatggtttttggaagaaaccagccttaaacctgatt
tataaaccttatcaaatccgaatattagatcctttcattatcagaacagcagcttatgaa
ctgcttcattttccaaaagtgtttcccaaaaatcagaaacctaaacacccaacaacagga
attattgccatcacattggcgttttacatatgtcacgaagttcacctagctggttttaaa
tacaacttttctgacctcaagagtcctttgcactactatgggaatgccaccatgtctttg
atgaataaggtgacaatgcagagccagggcaaaggtgtttaa

>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_4|565_aa
MAKPNSRKLRINNKTIQELADKIASAKKNLTDLIELKNTLQEFHNPIASINSRIDHAEER
ILELEDWLSEIRESDKRCYGTLGMESGVIADPQITASSVLEWTDHTGQENSWKPKKARLK
KPGPPWAAFATDEYQWLQIDLNKEKKITGIITTGSTMVEHNYYVSAYRILYSDDGQKWTV
YREPGVEQDKIFQGNKDYHQDVRNNFLPPIIARFIRVNPTQWQQKIAMKMELLGCQFIPK
GRPPKLTQPPPPRNSNDLKNTTAPPKIAKEIQTTIREYYKHLYANKLENLEEMDKFLDTY
TLPRLNQEEVESLNRPITGSEIEAIINSLPTKKSPGPDGFIAEFYQRKKKTEGTYDLPYW
DRAGWWKGMKQFLPAKAVDHEETPVRYSSSEVNHLSPREVTTVLQADSAEYAQPLVGGIV
GTLHQRSTFKPEEGKEAGYADLDPYNSPGQEVYHAYAEPLPITGPEYATPIIMDMSGHPT
TSVGQPSTSTFKATGNQPPPLVGTYNTLLSRTDSCSSAQAQYDTPKAGKPGLPAPDELVY
QVPQSTQEVSGAGRDGECDVFKEIL

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_4|1698_bp
atggcaaaacccaattcaaggaaactaagaattaacaataaaacaatacaggagctggca
gataaaatagccagtgcaaaaaagaatctaactgacctgatagagctgaaaaacacacta
caagaatttcacaacccaattgcaagtattaacagcagaatagaccacgctgaggaaaga
atcttggaacttgaagactggctctctgaaataagagagtcagacaaaagatgttatgga
acactggggatggagtctggtgtgatcgcggatcctcaaataacagcatcatctgtgctg
gagtggactgaccacacagggcaagagaacagttggaaacccaaaaaagccaggctgaaa
aaacctggaccgccttgggctgcttttgccactgatgaataccagtggttacaaatagat
ttgaataaggaaaagaaaataacaggcattataaccactggatccaccatggtggagcac
aattactatgtgtctgcctacagaatcctgtacagtgatgatgggcagaaatggactgtg
tacagagagcctggtgtggagcaagataagatatttcaaggaaacaaagattatcaccag
gatgtgcgtaataactttttgccaccaattattgcacgttttattagagtgaatcctacc
caatggcagcagaaaattgccatgaaaatggagctgctcggatgtcagtttattcctaaa
ggtcgtcctccaaaacttactcaacctccacctcctcggaacagcaatgacctcaaaaac
actacagcccctccaaaaatagccaaagaaatacaaactaccatcagagaatactacaaa
cacctctatgcaaataaactagaaaatctagaagaaatggataaattcctggacacatac
accctcccaagactaaaccaggaagaagttgaatccctgaatagaccaataacaggctct
gaaattgaggcaataattaatagcctaccaaccaaaaaaagtccaggaccagacggattc
atagccgaattctaccagagaaagaaaaaaactgaaggcacctatgacttaccttactgg
gaccgggcaggttggtggaaaggaatgaagcagtttcttcctgcaaaagcagtggaccat
gaggaaaccccagttcgctatagcagcagcgaagttaatcacctgagtccaagagaagtc
accacagtgctgcaggctgactctgcagagtatgctcagccactggtaggaggaattgtt
ggtacacttcatcaaagatctacctttaaaccagaagaaggaaaagaagcaggctatgca
gacctagatccttacaactcaccagggcaggaagtttatcatgcctatgctgaaccactc
ccaattacggggcctgagtatgcaaccccaatcatcatggacatgtcagggcaccccaca
acttcagttggtcagccctccacatccactttcaaggctacggggaaccaacctccccca
ctagtgggaacttacaatacacttctctccaggactgacagctgctcctcagcccaggcc
cagtatgataccccgaaagctgggaagccaggtctacctgccccagacgaattggtgtac
caggtgccacagagcacacaagaagtatcaggagcaggaagggatggggaatgtgatgtt
tttaaagaaatcctttga

>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_5|300_aa
MAKKIQLTYKCVQNWWVLGLTDFKNEAADPRRVKLQTFVVSVTALKAARLELFIPPGGFV
VSLASGVKLQTFAVSVTAHKGSVDPKTRHKGSPSPHQTQEPSWLHPVDPAPGLQVELPAS
PAPCARTPQPLGGQWDWVPWSRGRCSSGRLGPRSSPRWGAGSGMAGCRSRALPHGEAAKA
QRKVTAAAGPGAKHLTAWGWQGQLATPSVGPAEPTHTQNSHWPASAVCSPSSRLRLSLHT
YPQAEGAGSGLGQPRKGLPQCSSRLKGSSSAAKVGAQAEEVPRASEACEGCQHAVTSHKY

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_5|903_bp
atggcaaagaagattcaactgacatataagtgtgtccagaattggtgggttcttggtctc
actgacttcaagaacgaagccgcagaccctcgcagagtgaagctgcagaccttcgtggtg
agtgttacagctcttaaggcggcacgtctggagttgttcattcctcctggtgggttcgtg
gtctcgctggcttcaggagtgaagctgcagacctttgcggtgagtgttacagctcataaa
ggcagtgtggacccaaagactagacataaaggttctccaagtccccaccagactcaggag
cccagctggctgcacccagtggatcccgcaccggggctgcaggtggagctgcctgccagt
cccgcgccgtgcgcccgcactcctcagcccttgggtggtcaatgggactgggtgccatgg
agcagggggcggtgctcgtcggggaggcttgggccacgcagcagcccacggtggggggca
ggctcaggcatggcgggctgcaggtcccgagccctgccccacggggaggcagctaaggcc
cagcgaaaagtcacagcagctgctggcccaggtgctaagcacctcactgcctggggctgg
cagggccagctggccactccgagtgtggggcctgccgagcccacacacacccagaactcg
cactggcccgcaagcgccgtgtgcagccccagttcccgcctgcgcctctccctccacacc
tacccgcaagctgagggagccggctccggccttggccagcccaggaaggggctcccacag
tgcagcagcaggctgaagggctcctcaagtgctgccaaagtgggagcccaggcagaggag
gtgccgagagcgagcgaggcctgcgagggctgccagcacgctgtcacctctcataagtat
taa

>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_6|335_aa
MDTLTSQLKELEKQEQTHSKASRRQEITKIREELKEIGTQKNLQKINESRRWFFEKINKI
DRLLARLIKKREKNQIDAIKNDKGDITTDPTEIQTTIREYYKHLYANKQENLEEMDKFLD
MHTLPRLNQEEVESLNRPITGSEIEAIIAYQPKKVQDQTDSQPNSTRDAEKGFDKIQQPF
ILKTLNKSCIDETCLKIIRVIYDKPTANITLNGQKLEAFPLKTGAKQGCPLSLLLFHIVL
EVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIIYAQNLLKLISNFSKVSGYK
INVQKSQAFLYTNNRQTESQIMSELPFTTASKRIK

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_6|1008_bp
atggacaccctaacatcacaattaaaagaactagagaagcaagagcaaacacattcaaaa
gctagcagaaggcaagaaataactaagatcagagaagaactgaaggagatagggacacaa
aaaaaccttcaaaaaatcaatgaatccaggagatggttttttgaaaagatcaacaaaatt
gatagattgctagcaagactaataaagaaaagagagaagaatcaaatagacgcaataaaa
aatgataaaggggatatcaccaccgatcccacagagatacaaactaccatcagagaatac
tacaaacacctctacgcaaataaacaagaaaatctagaagaaatggataagttcctggac
atgcacaccctcccaagactaaaccaggaagaagttgaatccctgaacagaccaataaca
ggctctgaaattgaggcaataatagcctaccaaccaaaaaaagtccaggaccagacagat
tcacagccaaattctaccagagatgcagaaaaggggtttgacaaaattcaacagcctttt
atcctaaaaactctcaataaatcatgtattgatgagacgtgtctcaaaataataagagtt
atttatgacaaacccacagccaatatcacactgaatgggcaaaaactggaagcattccct
ttgaaaactggtgcaaaacagggatgccctctctcactactcctatttcatatagtattg
gaagttctggccagggcaatcaggcaggagaaagaaataaagggtattcagttaggaaaa
gaggaagtcaaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatc
atctacgcccaaaatcttcttaagctgataagcaacttcagcaaagtctcaggatacaaa
atcaatgtacaaaaatcacaggcattcttatataccaataacagacaaacagagagccaa
atcatgagtgaactcccattcacaactgcttcaaagagaataaaataa

>gi568815595f:98668441_98893758|GENSCAN_predicted_peptide_7|349_aa
XLAFSLWKESWLLAIPKAYGFNTEKFCIFPIVQGPGKGDGCGHTVLGPESGTLTSINYPQ
TYPNSTVCEWEIRVKMGERVRIKFGDFDIEDSDSCHFNYLRIYNGIGVSRTEIELEKTTL
KFIWNQKRAGIAKSILSQKNKAGGIRLPDFKLYYKATVTKTAWYWDQNRDIDQWNRTEPS
EIIPHIYNHLIFDKPDKNKKWGKDSLFNKWFWENWLAICKKLKLDPFLTPYAKTNSRWIK
DLNVRPKTIKTLEENLGSTIQDIGMGKDFMSETPKAMATKAKIDKWDLIKLKSFCTAKET
TIRVNRQPTEWEKIFAIYSSDKGLILRIYKELKQIYKKKTTPSTSGQMI

>gi568815595f:98668441_98893758|GENSCAN_predicted_CDS_7|1050_bp
nntctggctttctctttgtggaaggaatcatggctgctggcaatcccgaaggcttacggt
tttaacacggagaaattctgtattttccctattgtacaaggtccaggaaagggtgatgga
tgtggacacactgtactaggccctgagagtggaacccttacatccataaactacccacag
acctatcccaacagcactgtttgtgaatgggagatccgtgtaaagatgggagagagagtt
cgcatcaaatttggtgactttgacattgaagattctgattcttgtcactttaattacttg
agaatttataatggaattggagtcagcagaactgaaatagaattggaaaaaactacttta
aagttcatatggaaccaaaaaagagctggcattgccaagtcaatcctaagccaaaagaac
aaagcgggaggcatcaggctacctgacttcaaactatactacaaggctacagtaaccaaa
acagcatggtactgggaccaaaacagagatatagaccaatggaacagaacagagccctca
gaaataataccacacatctacaaccatctgatctttgacaaacctgacaaaaacaagaaa
tggggaaaggattccctatttaataaatggttctgggaaaactggctagccatatgtaaa
aagctgaaactggatcccttccttacaccttatgcaaaaactaattcaagatggattaaa
gacttaaatgttagacctaaaaccataaaaaccctagaagaaaacctaggcagtaccatt
caggacataggcatgggcaaggacttcatgtctgaaacaccaaaagcaatggcaacaaaa
gccaaaattgacaaatgggatctaattaaactaaagagcttctgcacagcaaaagaaact
accatcagagtgaacaggcaacctacagaatgggagaaaatttttgcaatctactcatca
gacaaagggctaatattgagaatctacaaagaactcaaacaaatttacaagaaaaaaaca
accccatcaacaagtgggcaaatgatatga