GENSCAN 1.0	Date run:  4-Nov-116	Time: 15:15:56

Sequence gi568815595f:56973695_57174241 : 200547 bp : 45.94% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init -   3716   3669   48  2  0   95   93   102 0.865  10.38
 1.00 Prom -   6820   6781   40                              -2.36

 2.08 PlyA -   9476   9471    6                               1.05
 2.07 Term -  24284  24186   99  2  0   99   44    76 0.416   2.43
 2.06 Intr -  32636  32577   60  2  0   50   64    90 0.166   1.73
 2.05 Intr -  38190  38146   45  0  0  123   36    43 0.138   1.21
 2.04 Intr -  39320  39114  207  2  0   59   52   102 0.206   2.97
 2.03 Intr -  40469  40346  124  1  1   30  101    65 0.071   2.59
 2.02 Intr -  45726  45608  119  0  2  131   59    73 0.777   7.96
 2.01 Init -  52880  52827   54  2  0   73   94    19 0.450   2.31
 2.00 Prom -  53100  53061   40                              -8.46

 3.00 Prom +  54523  54562   40                              -2.26
 3.01 Init +  62604  62656   53  2  2   72   82    25 0.278   0.93
 3.02 Intr +  65485  65618  134  1  2  110   77    39 0.769   5.29
 3.03 Intr +  71634  71711   78  1  0   74   97    32 0.106   2.22
 3.04 Term +  82063  82127   65  2  2   99   54    70 0.528   2.75
 3.05 PlyA +  82393  82398    6                               1.05

 4.00 Prom +  84977  85016   40                              -2.46
 4.01 Init +  89866  89966  101  0  2   82   94    57 0.397   5.51
 4.02 Term + 100706 100784   79  2  1   88   38    54 0.099  -2.36
 4.03 PlyA + 101719 101724    6                               1.05

 5.13 PlyA - 107648 107643    6                               1.05
 5.12 Term - 122811 122699  113  1  2  144   42    24 0.870   2.12
 5.11 Intr - 124844 123902  943  2  1  120   82  1009 0.931  94.23
 5.10 Intr - 127669 127485  185  2  2   70   64    65 0.561   1.81
 5.09 Intr - 128895 128785  111  1  0   53   65   118 0.946   6.35
 5.08 Intr - 131513 131387  127  2  1   94   94    32 0.775   4.65
 5.07 Intr - 132314 132163  152  0  2   89   99   257 0.950  26.78
 5.06 Intr - 133983 133837  147  1  0   96   48    53 0.773   2.31
 5.05 Intr - 135963 135843  121  0  1  132  105   -23 0.999   3.87
 5.04 Intr - 136617 136499  119  1  2   45   93   104 0.968   6.78
 5.03 Intr - 141123 140998  126  1  0  111  109   152 0.997  20.25
 5.02 Intr - 146619 146562   58  0  1  134   98    78 0.981  11.86
 5.01 Init - 147552 147511   42  0  0   30   89    20 0.100  -3.25
 5.00 Prom - 148422 148383   40                              -2.46

 6.00 Prom + 152462 152501   40                              -0.66
 6.01 Sngl + 160667 161029  363  1  0   59   48   455 0.486  34.68
 6.02 PlyA + 161087 161092    6                               1.05

 7.00 Prom + 167582 167621   40                              -5.36
 7.01 Init + 168574 168607   34  0  1   73   60     9 0.376  -3.92
 7.02 Intr + 169272 169301   30  1  0   89   94    27 0.411   1.50
 7.03 Term + 169602 169843  242  1  2   56   48   247 0.621  13.69
 7.04 PlyA + 171786 171791    6                               1.05

 8.03 PlyA - 172571 172566    6                               1.05
 8.02 Term - 183600 183550   51  0  0   95   48    76 0.509   1.73
 8.01 Init - 191592 191467  126  0  0  102   86   180 0.982  19.40
 8.00 Prom - 199736 199697   40                              -2.46


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_1|16_aa
MAMLMQVLALFPGAHL

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_1|48_bp
atggcaatgctgatgcaagtgctggccctgttcccaggagcccatctg

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_2|235_aa
MYIMSVSLLGNLIENSCQEHTEAEKDCDFLAIAYLGAHTWVQGKNKKPDPEELCREGRVK
LQTFPLSVTALKGSRLELFVPPGGFVVSLALRVKLQTFAPGPGAKPLTAQGQQECRACQA
RTHPEFTLACEPVRSPGSCPCFSLHIPLQAEGASFTSASPEMGSHSAACKSEALRALGSS
EDGWFSRYLTLVIGIDSWELPWQMRKQRPEELACDVAFNCTHVHEKCDFGIVKVL

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_2|708_bp
atgtacatcatgtcggtctccctcctgggaaatctgatagaaaattcctgccaggaacac
accgaggctgagaaagactgtgactttcttgccattgcctacctgggtgcacacacttgg
gtccagggaaaaaataagaaacctgatcctgaagaattgtgccgggaagggagagtgaag
ctgcaaaccttcccgctgagtgttacagctcttaaggggtcacgtctggagttgttcgtt
cctcctggcgggttcgtggtctcgctggctttaagagtgaagctccagaccttcgcgcct
ggcccgggtgctaagcccctcactgcccagggccagcaggagtgcagggcctgccaagcc
cgcacccacccggaattcacgctggcctgcgagcccgtgcgcagccccggttcctgccca
tgcttctccctccacatccctctgcaagcagagggagccagcttcacctcggccagccca
gagatgggttcccacagtgcagcgtgcaaatcagaggccctgcgagcactgggaagcagt
gaagatggatggttctccagatacctcacgctggtcattggcatcgacagctgggagctc
ccctggcagatgaggaaacagaggccagaagagcttgcatgtgacgttgccttcaactgt
acacacgttcatgagaagtgtgactttggaattgtgaaagttttatga

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_3|109_aa
MTTWTGKIPFGCMTPKFSWQDQHPLVFADTSCINLLQSTTASIGQKVLLILHLKISQEAP
SVVMPFMDTQYVFVDGQRACLWIHGGPKEASDSSSPLKPNRIPMHIPTV

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_3|330_bp
atgaccacctggactggtaaaataccattcgggtgcatgacgcccaagtttagctggcag
gatcagcacccattggtatttgctgatacctcctgcatcaacctcctgcaaagcacaact
gcgtccattggacagaaggtcctgctaattcttcatttaaaaatttcccaggaagcacca
agtgttgtaatgcctttcatggacactcagtatgtttttgttgatggacagagagcatgc
ttatggattcatggaggacccaaagaagcctctgattcctcctcgcccctgaagcccaac
agaattccaatgcacatccctactgtttga

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_4|59_aa
MTPQALGLSNQEVGVLLNRDVGRGSGESGILEARYHFFQEASLSHFPNITDEEIKIQKG

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_4|180_bp
atgacgccccaggctttgggcctgagcaaccaggaggttggggtgctccttaacagagat
gtgggaagaggatcaggagagtcgggcatcctagaagccagatatcactttttccaagaa
gcctccctgtcacacttccccaatatcacagatgaagaaatcaagattcagaaaggttaa

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_5|747_aa
MVPSNILLVEWKLQGVGPASRNSGLYNITFKYDNCTTYLNPVGKHVIADAQNITISQYAC
HDQVAVTILWSPGALGIEFLKGFRVILEELKSEGRQCQQLILKDPKQLNSSFKRTGMESQ
PFLNMKFETDYFVKVVPFPSIKNESNYHPFFFRTRGYLFNLPELLLSNFGGWSPWNRQQL
LLAFLISLSVIQGLGWSVLSNIPSFWKPRNLNISQHGSDMQVSFDHAPHNFGFRFFYLHY
KLKHEGPFKRKTCKQALSFMLLESIPLYETEAAVIPILQMRKLRLRDVTWLAQGRTAMHS
PWAGPIRAVAITVPLVVISAFATLFTVMCRKKQQENIYSHLDEESSESSTYTAALPRERL
RPRPKVFLCYSSKDGQNHMNVVQCFAYFLQDFCGCEVALDLWEDFSLCREGQREWVIQKI
HESQFIIVVCSKGMKYFVDKKNYKHKGGGRGSGKGELFLVAVSAIAEKLRQAKQSSSAAL
SKFIAVYFDYSCEGDVPGILDLSTKYRLMDNLPQLCSHLHSRDHGLQEPGQHTRQGSRRN
YFRSKSGRSLYVAICNMHQFIDEEPDWFEKQFVPFHPPPLRYREPVLEKFDSGLVLNDVM
CKPGPESDFCLKVEAAVLGATGPADSQHESQHGGLDQDGEARPALDGSAALQPLLHTVKA
GSPSDMPRDSGIYDSSVPSSELSLPLMEGLSTDQTETSSLTESVSSSSGLGEEEPPALPS
KLLSSGSCKADLGCRSYTDELHAVAPL

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_5|2244_bp
atggttccctccaacatccttcttgttgagtggaaacttcagggagtggggccagccagc
agaaacagtgggctgtacaacatcaccttcaaatatgacaattgtaccacctacttgaat
ccagtggggaagcatgtgattgctgacgcccagaatatcaccatcagccagtatgcttgc
catgaccaagtggcagtcaccattctttggtccccaggggccctcggcatcgaattcctg
aaaggatttcgggtaatactggaggagctgaagtcggagggaagacagtgccaacaactg
attctaaaggatccgaagcagctcaacagtagcttcaaaagaactggaatggaatctcaa
cctttcctgaatatgaaatttgaaacggattatttcgtaaaggttgtcccttttccttcc
attaaaaacgaaagcaattaccaccctttcttctttagaacccgaggttatctctttaat
cttcctgagttgctgctttcaaactttggtggctggtcgccctggaacaggcagcagctc
cttcttgccttcctgatcagtctttctgtcattcaaggccttggatggtcagtcctgtcc
aacatcccctccttctggaagcctcggaacctgaacatcagccagcatggctcggacatg
caggtgtccttcgaccatgcaccgcacaacttcggcttccgtttcttctatcttcactac
aagctcaagcacgaaggacctttcaagcgaaagacctgtaagcaggccctgagctttatg
ctccttgaatccataccactctatgaaacagaggctgctgtcatccccattttacagatg
agaaagctgaggctcagggatgtcacctggcttgctcaaggccgcacagctatgcactcc
ccgtgggccgggcccatcagagccgtggccatcacagtgccactggtagtcatatcggca
ttcgcgacgctcttcactgtgatgtgccgcaagaagcaacaagaaaatatatattcacat
ttagatgaagagagctctgagtcttccacatacactgcagcactcccaagagagaggctc
cggccgcggccgaaggtctttctctgctattccagtaaagatggccagaatcacatgaat
gtcgtccagtgtttcgcctacttcctccaggacttctgtggctgtgaggtggctctggac
ctgtgggaagacttcagcctctgtagagaagggcagagagaatgggtcatccagaagatc
cacgagtcccagttcatcattgtggtttgttccaaaggtatgaagtactttgtggacaag
aagaactacaaacacaaaggaggtggccgaggctcggggaaaggagagctcttcctggtg
gcggtgtcagccattgccgaaaagctccgccaggccaagcagagttcgtccgcggcgctc
agcaagtttatcgccgtctactttgattattcctgcgagggagacgtccccggtatccta
gacctgagtaccaagtacagactcatggacaatcttcctcagctctgttcccacttgcac
tcccgagaccacggcctccaggagccggggcagcacacgcgacagggcagcagaaggaac
tacttccggagcaagtcaggccggtccctatacgtcgccatttgcaacatgcaccagttt
attgacgaggagcccgactggttcgaaaagcagttcgttcccttccatcctcctccactg
cgctaccgggagccagtcttggagaaatttgattcgggcttggttttaaatgatgtcatg
tgcaaaccagggcctgagagtgacttctgcctaaaggtagaggcggctgttcttggggca
accggaccagccgactcccagcacgagagtcagcatgggggcctggaccaagacggggag
gcccggcctgcccttgacggtagcgccgccctgcaacccctgctgcacacggtgaaagcc
ggcagcccctcggacatgccgcgggactcaggcatctatgactcgtctgtgccctcatcc
gagctgtctctgccactgatggaaggactctcgacggaccagacagaaacgtcttccctg
acggagagcgtgtcctcctcttcaggcctgggtgaggaggaacctcctgcccttccttcc
aagctcctctcttctgggtcatgcaaagcagatcttggttgccgcagctacactgatgaa
ctccacgcggtcgcccctttgtaa

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_6|120_aa
MGISKRKGTANAQMPGNVTWMRRMRILCWLLRRYCESKKIDHHTYHSLYLKVKGNVFKNK
WILMEHILKLKADKAHKKLQADQAKARRSKTKEARKHHEDRLQAKEEIIKTLSKEEETEK

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_6|363_bp
atgggcataagtaagcgaaagggtacagccaatgcccaaatgccagggaacgtaacttgg
atgaggagaatgcggattctgtgctggctgctgagaagatactgtgaatctaagaagatt
gatcaccacacatatcacagcctgtacctgaaggtgaaggggaatgtgttcaaaaacaag
tggattctcatggaacacatcctcaagctgaaggcagacaaggcccacaagaagctgcag
gctgaccaggctaaggcccgcaggtctaagaccaaggaagcacgcaagcaccatgaagac
cgcctacaggccaaggaggagatcatcaagactttgtctaaggaggaagagaccgagaag
tga

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_7|101_aa
MGANTFLLGIQEGLMLALSIEGTKLSQCWRDLSPLYLDNLNKGYDNLNKGYVILISDEVK
TGTPSEEPVLKVPCYCLPRVQGTSPGSTASVPEGCQYPYQK

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_7|306_bp
atgggagccaatacattccttctgggaattcaggaggggttgatgctggctctgagtatt
gaaggcacaaaactgtctcagtgctggagggacctatctccactctaccttgacaatctc
aacaaaggctacgacaatctcaacaaaggctacgtcattctcatcagtgatgaggtaaaa
acagggactccctcagaggagccagtcctgaaggtgccctgctactgcctccctagagtg
caaggaacatctccagggtctacagcctcagtccctgaaggctgccagtacccctatcag
aagtag

>gi568815595f:56973695_57174241|GENSCAN_predicted_peptide_8|58_aa
MAPWLQLCSVFFTVNACLNGSQLAVAAGGSGRARGADTCGWRRNLNGLLLLLILELPP

>gi568815595f:56973695_57174241|GENSCAN_predicted_CDS_8|177_bp
atggccccgtggctgcagctctgctccgtcttctttacggtcaacgcctgcctcaacggc
tcgcagctggctgtggccgctggcgggtccggccgcgcgcggggcgccgacacctgtggc
tggaggagaaacttgaacgggcttctgctgctcctcatcctagaactgcccccgtga