GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:46:33

Sequence gi568815595f:186800198_187000554 : 200357 bp : 44.93% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.05 PlyA -    575    570    6                               1.05
 1.04 Term -   2603   2544   60  2  0  111   42    34 0.128  -1.10
 1.03 Intr -   6340   6228  113  2  2  -37   97   110 0.243  -0.50
 1.02 Intr -   6787   6551  237  2  0   41  115   139 0.886   9.49
 1.01 Init -  10612  10543   70  1  1   81  105    61 0.911   8.31
 1.00 Prom -  15317  15278   40                              -5.06

 2.00 Prom +  15629  15668   40                              -4.16
 2.01 Init +  17435  17493   59  1  2   51   77    69 0.394   2.88
 2.02 Intr +  24784  25013  230  1  2   72   38   107 0.291   1.61
 2.03 Intr +  26355  26425   71  1  2   71  105   120 0.151  10.90
 2.04 Intr +  26850  26947   98  2  2   48   92    64 0.712   1.61
 2.05 Term +  27020  27365  346  2  1   88   39   167 0.889   5.77
 2.06 PlyA +  29068  29073    6                               1.05

 3.00 Prom +  50458  50497   40                              -5.96
 3.01 Init +  52841  53075  235  1  1   46  110   203 0.749  14.60
 3.02 Term +  53987  54507  521  0  2   80   43   645 0.999  53.66
 3.03 PlyA +  56659  56664    6                               1.05

 4.04 PlyA -  56685  56680    6                               1.05
 4.03 Term -  74470  74376   95  2  2   86   49    54 0.273  -0.71
 4.02 Intr -  89830  89446  385  1  1   33   76   457 0.615  33.42
 4.01 Init -  93782  93702   81  2  0   38   98    22 0.630  -0.83
 4.00 Prom -  98838  98799   40                              -3.96

 5.00 Prom +  99075  99114   40                              -9.46
 5.01 Sngl + 100001 100360  360  1  0  110   41   300 0.989  23.57
 5.02 PlyA + 100373 100378    6                               1.05

 6.04 PlyA - 100418 100413    6                               1.05
 6.03 Term - 106143 105875  269  1  2   44   37   183 0.017   4.46
 6.02 Intr - 115679 115512  168  0  0   72   52    62 0.006   0.92
 6.01 Init - 122430 122121  310  0  1   65   42   351 0.315  25.68
 6.00 Prom - 127047 127008   40                              -2.56

 7.03 PlyA - 131666 131661    6                               1.05
 7.02 Term - 142414 142241  174  1  0  107   48    70 0.499   2.66
 7.01 Init - 151174 151091   84  1  0   86   55    82 0.634   3.52
 7.00 Prom - 154764 154725   40                              -1.86

 8.06 PlyA - 154881 154876    6                               1.05
 8.05 Term - 160074 160021   54  0  0  116   36    57 0.484   0.86
 8.04 Intr - 175510 175325  186  1  0   52   96    36 0.021   0.69
 8.03 Intr - 187474 187401   74  2  2  131   91    -4 0.577   3.33
 8.02 Intr - 196416 196377   40  0  1   89   97     6 0.479  -0.60
 8.01 Init - 196758 196579  180  0  0   76   75    84 0.442   5.08
 8.00 Prom - 198178 198139   40                              -2.76


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_1|159_aa
MAPGCSASGEGLMLPYDMEEKQKDTIRSKSHVSSRGQGKASSDVSALKAHAFCSATKQDK
EDRDLHLRRPAPTKIAGSGPSVDRQGSRGPRAAAPPSLLSLPAPEVTRYVPAYSYRRIPA
LLFARRSVAGTEATVGTSVIVFEYESLLYNIYWIPKRRH

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_1|480_bp
atggcgccaggctgttcagcttctggtgagggcctcatgctgccttatgacatggaggag
aagcagaaagacactattagaagtaaaagccacgtgtcctcaagagggcaaggcaaagca
tcttcagatgtctctgcccttaaagcacacgcgttctgctctgcgacgaagcaggacaag
gaggacagggacctgcacctccggaggcccgcacctacgaagatagcgggctcgggacct
tcggtggaccggcagggttccagaggcccgcgcgccgccgccccgccctcattgctgagc
ctgccagcaccggaagtgacgcgttacgtgcccgcgtattcctaccggcgtattcccgcc
ctgcttttcgcccgccgttccgtggcgggaactgaggcgactgtggggacatcagtgatc
gtatttgaatatgagtccctgctttataacatatactggattcccaagagaagacattaa

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_2|267_aa
MVSDANSEGSKNSAGIYSGCPGIIRSTEAMDTQGMVKVVAPSVLPFLPHRAFSKIDGHSS
VLTAPGIRGPQGWMTSLKRNLSGFPAAAPKSRLEDEGCSSREFSSMDTFEGYEGAEDMEK
LDDSHETCSSKSAFLERRESTQGEKEERDEEATATGSTKKERAGASTPADSCGGDGWFPG
EGAAPEDLHPGELPSLRSPRLPGSRAPAFPREAMWGPGPCPATQKAAGAAAAAERGRPGP
PPGSPRGALRARLAPAARRRTSRDGDP

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_2|804_bp
atggtgagtgatgcaaacagcgagggctctaagaattcagcagggatctacagtggatgc
cccggcatcatccggagcacagaggccatggacactcaggggatggtcaaggtcgtagct
ccctccgttcttccgttcctccctcacagagctttcagcaagatagatggtcattcttct
gtcctcactgctcccggcataaggggaccccagggctggatgacttccctaaagaggaat
ctctcagggtttcctgcagccgctcccaagtcccgtctggaggatgaaggctgctccagc
agggagtttagctccatggacacctttgaaggctatgaaggtgcagaagacatggaaaag
ttggatgacagtcacgaaacctgttcctccaaatccgctttcctggagaggagagaaagc
acccagggagaaaaagaagaacgcgatgaggaagcaacggcgaccggcagcaccaagaag
gagcgtgctggggcgtccacgccggctgactcctgcgggggcgacggctggtttccaggc
gagggcgcggcgcccgaggacctccaccccggagagctgccctccctgcggtcgccccgg
ctccccggctccagagcgcccgcattcccgagagaggcgatgtgggggcccgggccctgc
ccagctacgcagaaagcagccggggccgcggcggcggcagaaaggggacgcccagggccg
cctcccgggagcccgaggggtgccctgcgtgctcgtctagctcccgccgcccggcgaagg
acctcgcgggacggggacccctag

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_3|251_aa
MWIPGLRMLLLGAVLLLLALPGHDQETTTQGPGVLLPLPKGACTGWMAGIPGHPGHNGAP
GRDGRDGTPGEKGEKGDPGLIGPKGDIGETGVPGAEGPRGFPGIQGRKGEPGEGAYVYRS
AFSVGLETYVTIPNMPIRFTKIFYNQQNHYDGSTGKFHCNIPGLYYFAYHITVYMKDVKV
SLFKKDKAMLFTYDQYQENNVDQASGSVLLHLEVGDQVWLQVYGEGERNGLYADNDNDST
FTGFLLYHDTN

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_3|756_bp
atgtggattccagggctcaggatgctgttgctgggagctgttctactgctattagctctg
cccggtcatgaccaggaaaccacgactcaagggcccggagtcctgcttcccctgcccaag
ggggcctgcacaggttggatggcgggcatcccagggcatccgggccataatggggcccca
ggccgtgatggcagagatggcacccctggtgagaagggtgagaaaggagatccaggtctt
attggtcctaagggagacatcggtgaaaccggagtacccggggctgaaggtccccgaggc
tttccgggaatccaaggcaggaaaggagaacctggagaaggtgcctatgtataccgctca
gcattcagtgtgggattggagacttacgttactatccccaacatgcccattcgctttacc
aagatcttctacaatcagcaaaaccactatgatggctccactggtaaattccactgcaac
attcctgggctgtactactttgcctaccacatcacagtctatatgaaggatgtgaaggtc
agcctcttcaagaaggacaaggctatgctcttcacctatgatcagtaccaggaaaataat
gtggaccaggcctccggctctgtgctcctgcatctggaggtgggcgaccaagtctggctc
caggtgtatggggaaggagagcgtaatggactctatgctgataatgacaatgactccacc
ttcacaggctttcttctctaccatgacaccaactga

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_4|186_aa
MCQGHKTIVGRGLADKHVNKGLCIIDKPGRQSETVSQKKKKKEREKEKRKRKRRNKKKKE
EKEKERKRKRRKKKKKEEKEKEKEKRKKKERERERKRKRKKRKKKKKRKKKKKKKKKKII
PHIFLNLKPPRFVLCRVGSISLLVSDNGDVNEMIIDMATIRFLNLFPTFPPFPFHKTAIV
IMARSQ

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_4|561_bp
atgtgtcagggtcacaagacaatagtggggagagggttagcagacaaacacgtgaacaaa
ggtctttgcatcatagacaagcctgggcgacagagcgagactgtgtctcaaaaaaaaaaa
aagaaggagagggagaaggagaagaggaagaggaagaggaggaacaagaagaagaaggaa
gagaaggagaaggagaggaagaggaagaggaggaagaagaagaagaaggaggagaaggaa
aaggagaaggagaagaggaagaagaaggagagggagagggagaggaagaggaagaggaag
aagaggaagaagaagaagaagaggaagaagaagaagaagaagaagaagaagaagattatt
cctcacatcttcctcaacctcaagcctcccagatttgtcctatgcagagtgggcagcatc
tccctcttggtgagtgacaatggagatgtcaatgagatgatcattgacatggcaaccatc
cgatttctcaatcttttccccacctttcccccctttccattccacaaaaccgccattgtc
atcatggcccgttctcaatga

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_5|119_aa
MAFKDTGKAPVEPEVAIHRIRITLTSRSVKSLEKVGADLIRGAKAKNLKVKGGVRMPSKT
LRITTRKTPCGEGSKTWDRFQMRIHKRLFDLHSPSEIVKQITSISTEPGVEVEVTIADA

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_5|360_bp
atggcttttaaggataccggaaaagcacccgtggagccggaggtggcaattcaccgaatt
cgaatcaccctaacaagccgcagcgtaaaatccttggaaaaggtgggtgctgacttgatc
agaggcgcaaaagcaaagaatctcaaagtgaaaggaggagttcgaatgccttccaagact
ttgagaatcactacaagaaaaactccttgtggtgaaggttctaagacgtgggatcgtttc
cagatgagaattcacaagcgactctttgacttgcacagtccttctgagattgttaagcag
attacttccatcagtactgagccaggagttgaggtggaagtcaccattgcagatgcttaa

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_6|248_aa
MCFAKKHNKKSLKKMQANSAEAMSAHAEAIRALVKPKEAKPKIPKDVSHKLNRLAYIPHP
KLGKRARARVAKGLRLCRPKAKAKDQTKVQAAAPASTPAQAPKDYKAEALEEETTCTRKL
LDKDGKMTLDDIISLLPTFNTMNSKSKSNRKKVPSISAFEIQATIREYYKHHCANKLENL
EEMDKFLDTYTLSRLNQEEVESLNRPITGSEIEAVINNLPTKKNPESDGFTAEFYQRYNE
ELVPFLLK

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_6|747_bp
atgtgctttgccaagaagcacaacaagaagagcctaaagaagatgcaggccaacagtgcc
gaggccatgagtgcacatgccgaggctatcagggcccttgtgaagcccaaggaggctaag
cccaagatcccaaaggatgtcagccacaagctcaatcgacttgcctacattccccacccc
aagcttgggaagcgtgctcgtgcccgcgttgccaaggggctcaggctgtgccggccaaag
gccaaggccaaggaccaaaccaaggtccaggctgcagctccagcttcaactccagctcag
gctcccaaagattataaagctgaggctctagaagaagaaaccacttgcacaagaaaactt
ctggataaagatggcaaaatgactctagatgacataatctctctcctcccaacatttaac
acaatgaacagcaaaagtaaaagcaacagaaaaaaagtaccatcaatttccgcttttgaa
atacaagctaccatcagagaatactataaacaccactgtgcaaataaactagaaaatcta
gaagaaatggataaattcctggacacatacaccctttcaagactaaaccaggaagaagtc
gagtccctgaatagaccaataacaggctctgaaattgaggcagtaattaataatctacca
accaaaaaaaatccagaatcagacggattcacagccgaattctaccagaggtacaacgag
gagctggtaccattccttttgaaatga

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_7|85_aa
MAKNYGLAQWLMPVIPALWEADVGGLPEERKGSALNTVGALDSSTEDHREVVKGTAFLKL
KLEARHCTKENSINQQTDADLQRLQ

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_7|258_bp
atggccaagaattacggcctggcgcagtggctcatgcctgtaatcccagcactttgggag
gccgatgtgggcggattgcctgaggaaagaaagggatcagccttaaacacggtgggtgcc
ctcgattccagcacagaggaccatcgagaggttgtaaagggtacagcattcctaaaatta
aagctggaagctcggcactgtactaaggaaaactccatcaaccaacagacggatgcagat
ttacaaagactgcaatga

>gi568815595f:186800198_187000554|GENSCAN_predicted_peptide_8|177_aa
MNKLKVEMALETNWQYKVESAGYQCSRDPSREGQEAGDTYVVANRKDSRVQTFAKQESRK
VLQLTHDPLKQVCRFSHLRKILRTFNSTSAKNIFRFPQCSVSLHLFRWILSFLLGKRSRT
RGKKWMGEYKEAMEEHTVGKFSCGQAEGDWLNSKRQMARQTQKHLDDTEDDSKEEGG

>gi568815595f:186800198_187000554|GENSCAN_predicted_CDS_8|534_bp
atgaacaagctcaaagtggagatggccttggaaacaaactggcaatacaaggtggaaagt
gcaggataccagtgtagcagggacccaagcagagaggggcaagaagcgggggacacgtat
gtagtggccaacaggaaggactctagagtgcagacatttgcaaaacaggagagcagaaag
gttctccagctcacccatgatccactcaagcaggtgtgccgtttctcccatctccgtaag
atcttgaggaccttcaacagcacttcagcaaaaaacattttcaggtttcctcagtgttct
gtttctctccatctctttcgctggatcctctccttcctcctgggcaagagaagtagaaca
agagggaagaagtggatgggagagtacaaagaggccatggaagaacacactgtggggaag
ttcagttgtggacaggcagagggagactggttgaacagcaaaaggcagatggccaggcag
acccagaagcatctagatgacacagaagatgattctaaggaagagggtggctaa