GENSCAN 1.0	Date run:  3-Nov-116	Time: 16:06:38

Sequence gi568815594r:9975381_10216234 : 240854 bp : 47.83% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    984    979    6                              -0.45
 1.03 Term -   1803   1714   90  0  0   50   49    97 0.225  -0.28
 1.02 Intr -   5323   5212  112  0  1   70  113   130 0.449  14.08
 1.01 Init -   6014   5551  464  2  2   63  -64  1055 0.540  82.97
 1.00 Prom -   8446   8407   40                              -4.16

 2.08 PlyA -   8916   8911    6                               1.05
 2.07 Term -  10169  10084   86  0  2   60   55    39 0.573  -4.38
 2.06 Intr -  10413  10289  125  2  2  115   78   160 0.790  17.93
 2.05 Intr -  28227  28068  160  1  1   41   61   112 0.050   2.85
 2.04 Intr -  38823  38809   15  1  0  131  100     2 0.156   1.22
 2.03 Intr -  41312  41240   73  2  1   75  103    29 0.902   2.08
 2.02 Intr -  43693  43595   99  1  0  140  117   163 0.968  24.71
 2.01 Init -  50586  50524   63  0  0   85   57    96 0.756   7.35
 2.00 Prom -  51286  51247   40                              -8.56

 3.00 Prom +  52908  52947   40                              -2.86
 3.01 Init +  59017  59074   58  0  1   78   81    40 0.321   3.78
 3.02 Intr +  76398  76537  140  1  2   98   53     4 0.004  -1.92
 3.03 Intr +  80479  80544   66  0  0  120   93   -22 0.007   0.60
 3.04 Term +  93853  93912   60  0  0   97   49   104 0.631   5.20
 3.05 PlyA +  94626  94631    6                               1.05

 4.22 PlyA -  94819  94814    6                               1.05
 4.21 Term - 100104  99998  107  1  2   88   55   161 0.998  11.37
 4.20 Intr - 102068 101924  145  2  1   67   57   108 0.921   5.46
 4.19 Intr - 102546 102373  174  0  0  106  109   432 0.999  47.24
 4.18 Intr - 103621 103511  111  1  0   98  103   210 0.998  24.08
 4.17 Intr - 106064 105977   88  1  1   81   91   114 0.596  10.97
 4.16 Intr - 107783 107642  142  0  1   45   94   287 0.810  24.41
 4.15 Intr - 109616 109463  154  2  1   32   15    84 0.109  -4.85
 4.14 Intr - 110434 110252  183  1  0   45  119    34 0.655   2.18
 4.13 Intr - 112560 112327  234  0  0   81  116   264 0.998  26.39
 4.12 Intr - 112993 112913   81  1  0   43   73   103 0.806   4.13
 4.11 Intr - 113361 113284   78  0  0   97  110    85 0.964  11.35
 4.10 Intr - 116110 115872  239  2  2   54   82    81 0.722   1.43
 4.09 Intr - 116759 116657  103  2  1   42   45   153 0.793   6.15
 4.08 Intr - 122511 122331  181  2  1   19   88   177 0.885  10.67
 4.07 Intr - 123759 123612  148  1  1  122   81   134 0.996  15.39
 4.06 Intr - 128606 128516   91  2  1   95   69   131 0.683  11.47
 4.05 Intr - 140854 140733  122  2  2  118   86   214 0.930  24.41
 4.04 Intr - 154696 154560  137  0  2   64    4    88 0.022  -1.79
 4.03 Intr - 156944 156795  150  1  0  106   60    68 0.638   5.08
 4.02 Intr - 158428 158298  131  1  2   53   95    45 0.112   1.19
 4.01 Init - 177943 177854   90  1  0   62   77    94 0.269   6.19
 4.00 Prom - 181421 181382   40                              -7.36

 5.11 PlyA - 181562 181557    6                               1.05
 5.10 Term - 191083 190919  165  1  0   68   49   128 0.876   4.82
 5.09 Intr - 192134 191731  404  0  2   56   24   233 0.809   7.85
 5.08 Intr - 193270 193165  106  1  1   67   29    99 0.951   1.69
 5.07 Intr - 195029 194840  190  1  1  -14   38   158 0.616   0.19
 5.06 Intr - 197027 196910  118  0  1   77   82   106 0.788   8.42
 5.05 Intr - 197532 197399  134  2  2  -26   74   110 0.317  -1.51
 5.04 Intr - 198774 198633  142  1  1    2   86   110 0.094   1.61
 5.03 Intr - 206608 206477  132  2  0  -26  100    96 0.074   0.02
 5.02 Intr - 210320 210201  120  0  0   55  113    52 0.736   4.87
 5.01 Init - 212607 212523   85  0  1   73   99    75 0.609   8.08
 5.00 Prom - 221332 221293   40                              -2.26

 6.00 Prom + 223427 223466   40                              -6.56
 6.01 Init + 225714 225743   30  2  0   88   84    39 0.046   1.76
 6.02 Intr + 231986 232043   58  1  1   98  100   -14 0.173  -0.74
 6.03 Intr + 234710 234972  263  0  2   79   56   125 0.308   5.61
 6.04 Term + 238929 239078  150  2  0   68   40   105 0.239   1.61
 6.05 PlyA + 239942 239947    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:9975381_10216234|GENSCAN_predicted_peptide_1|221_aa
MCIGYYHCDHHHHHHHHHHHHTITITTIATITIITITTTTTTITIIIIATTIITVITTTI
IIITIMTITTTTTITTITTTIITVTIAIITITTTTTITITTITTTIIITIMTITITTTIT
TITTTVITITVIITINTITSTNTISCVLSSEMHLHEISPKEIRGSLGQVTAIFICIGVFT
GQLLGLPELLGKQWDIIEDMMSASRRLLACSMEKGLDPSQD

>gi568815594r:9975381_10216234|GENSCAN_predicted_CDS_1|666_bp
atgtgtattggctattatcattgtgaccaccatcaccaccatcaccatcaccaccaccac
cacaccatcactatcaccaccatcgccaccatcactatcataaccattactactaccacc
accactatcaccatcatcatcattgccacaaccatcatcacagtcatcaccaccaccatc
atcatcatcaccatcatgaccatcactaccaccaccaccatcactaccattaccaccacc
atcatcaccgtcaccatcgccatcattaccatcactaccactaccaccatcaccattact
accatcactactaccatcatcatcaccatcatgaccatcactatcaccaccaccatcact
accatcacgaccaccgttatcaccatcaccgtcattatcaccatcaataccatcacctcc
accaacaccatcagctgtgtcctgtcctctgaaatgcacctccatgagatctcacccaag
gagatccgtggctctctggggcaggtgactgccatctttatctgcattggcgtgttcact
gggcagcttctgggcctgcccgagctgctgggaaagcaatgggacatcattgaggacatg
atgagtgcttcaagaaggcttttggcctgcagcatggagaaaggattggatcccagccag
gactga

>gi568815594r:9975381_10216234|GENSCAN_predicted_peptide_2|206_aa
MKLSKKDRGEDEESDSAKKKLDWSCSLLVASLAGAFGSSFLYGYNLSVVNAPTPKNNFGV
SEKDRRGQSLEVFNGKDHVGLETDLEDKRSVAKSIGANSFRGTFEKSVPAGGLGYAASLL
APPESIEASVSHFPTSQKHTLLANNGFAISAALLMACSLQAGAFEMLIVGRFIMGIDGGT
KDAGTLHKVGQSCGMNHPIHDALAPN

>gi568815594r:9975381_10216234|GENSCAN_predicted_CDS_2|621_bp
atgaagctcagtaaaaaggaccgaggagaagatgaagaaagtgattcagcgaaaaagaaa
ttggactggtcctgctcgctcctcgtggcctccctcgcgggcgccttcggctcctccttc
ctctacggctacaacctgtcggtggtgaatgcccccaccccgaaaaacaactttggtgtc
agtgagaaggacaggaggggccagagcttagaggtatttaatgggaaagaccatgtgggc
ttagaaacggacctggaagacaaacgttcagttgccaaaagcattggggcaaacagcttt
cggggaacttttgagaaaagtgttcctgcagggggcctaggctatgcagcaagtcttctg
gcccctccagagtctatagaggcttctgtcagccatttcccaacgtcacagaagcacact
ttgctggccaataatgggtttgcaatttctgctgcattgctgatggcctgctcgctccag
gcaggagcctttgaaatgctcatcgtgggacgcttcatcatgggcatagatggagggacc
aaggatgctggaactctgcataaagtgggacagtcctgtgggatgaaccatcccattcat
gatgctctagcccctaattga

>gi568815594r:9975381_10216234|GENSCAN_predicted_peptide_3|107_aa
MESVSGKAKATAAGFALGDALWVPPQNRSRGCLFSLLYSQPAKMPSHQLSQPPPLSPANR
SHSATKLPCKKSFSPPAMILRPPQPCGTNADAILEGELPKWDVEAAA

>gi568815594r:9975381_10216234|GENSCAN_predicted_CDS_3|324_bp
atggaatcagtttctggcaaagccaaggccacagccgcagggtttgccttgggagatgcg
ctatgggttccaccacaaaacagatcccgcggctgcctgttttcattactctactctcag
ccagccaagatgccttcccaccagctctcacagcctccacccttgtcccccgcaaaccga
tcgcactcagcaacaaagctgccatgtaagaagtccttttcacctcccgccatgattctg
agacctccccagccatgtggaactaatgcagatgctatcctggagggcgagctgcccaaa
tgggatgtggaggcagcagcatga

>gi568815594r:9975381_10216234|GENSCAN_predicted_peptide_4|962_aa
MTGSATQNGCILDPAQVSDMRIFVQEEIHMLPCLESPRVHLPQALIATVTVGQKSRFSSN
YVPQFQNTFPCEAWMSRDECLLLKAVHTEDIQGFLPIAATLCLWDKLLESVTKGPSWSDS
QDGGIYGFTEVKHSASVKSYNTRTGLTLASFLISTLESQWLPSTESLNRKKVFASLPQVE
RGVSKIIGGDPKGNNFLYTNGKCVILRNIDNPALADIYTEHAHQVVVAKYAPSGFYIASG
DVSGKLRIWDTTQKEHLLKYEYQPFAGKIKDIAWTEDSKRIAVVGEGREKFGAVFLWDSG
SSVGEITGHNKVINSVDIKQSRPYRLATGSDDNCAAFFEGPPFKFKFTIGEAQAGLEEPV
RSQRQGEAVLAKEAEFGSERTRCAGLVFSCEEFARRLSMAPRGVKRLWRALEPHLESWFS
LSAAEWIGPSGETAFPNFTYLEVLENLEHRPFKQRRPALELVKKDHSRFVNCVRFSPDGN
RFATASADGQIYIYDGKTGEKVCALGGSKAHDGGIYAISWSPDSTHLLSASGDKTSKIWD
VSVNSVVSTFPMGSTVLDQQLGCLWQKDHLLSVSLSGYINYLDRNNPSKPLHVIKWDGAA
GISPGCVLEPPGSSKKRWLLTPPEALSLQGSLRAAGACRPPEGTPVGIWAWLGVFLGQHS
WAGREKKPHKPGPEANVASEVLLDRPPCGSPRRVLVGGVQATCLHTLETGENDSFAGKGH
TNQVSRMTVDESGQLISCSMDDTVRYTSLMLRDYSGQGVVKLDVQPKCVAVGPGGYAVVV
CIGQIVLLKDQRKCFSIDNPGYEPEVVAVHPGGDTVAIGGVDGNVRLYSILGTTLKDEGK
LLEAKGPVTDVAYSHDGAFLAVCDASKVVTVFSVADGYSENNVFYGHHAKIVCLAWSPDN
EHFASGGMDMMVYVWTLSDPETRVKIQDAHRLHHVSSLAWLDEHTLVTTSHDASVKEWTI
TY

>gi568815594r:9975381_10216234|GENSCAN_predicted_CDS_4|2889_bp
atgactggctctgcaactcagaatggctgcatcctggacccagctcaagtgtcagacatg
agaatctttgtccaggaagaaattcacatgctgccctgcctagagagcccccgtgtccac
ctgcctcaggccctcattgccacagtcacagtaggccagaagtccaggttttccagcaat
tatgttcctcaattccagaacacgttcccatgtgaggcctggatgtcgcgggatgagtgc
ttactactgaaggctgttcacactgaggacattcaaggatttctcccaatagcagcgacc
ctatgtttatgggataaactactggagtctgtcactaaaggtccttcctggtctgactca
caggatggggggatctacggttttacagaagtgaagcactcagccagtgtcaagtcttat
aatacccggactggtctgacactggccagtttcctcatctctacactggaatcacagtgg
ctgcccagcacggagtcactcaaccgaaagaaggtgttcgccagcctcccgcaggtggag
aggggcgtctccaagatcatcggcggcgaccctaagggcaacaattttctgtacaccaat
ggaaagtgcgtcatcctaaggaacatcgacaacccagcccttgctgacatctacacagag
cacgcccatcaggtggtggtggccaagtatgcgcccagcggattctacattgcctccgga
gatgtgtctgggaagctgaggatctgggataccacgcagaaggagcacctgttgaagtat
gagtaccagcctttcgctgggaagatcaaagacattgcttggactgaagacagtaagagg
atcgccgtggtcggggaaggaagggagaagtttggagcagtcttcctctgggatagtggc
tcttctgtgggcgagattacaggacacaacaaagtcatcaacagcgtggacatcaagcag
agccggccataccggctggccacgggaagcgatgataactgcgcggcattctttgaggga
cccccattcaagttcaagttcacaattggcgaagctcaggctggcttggaggagccagtg
cgaagtcagcggcaaggcgaggctgtgctggccaaggaagcggagttcggcagcgagaga
actcgatgtgctggcctggtgttctcctgtgaagaatttgcccgcaggctctccatggcc
cctcggggggtaaagcgtctctggagggccctggagccccatctggaaagttggttttca
ctctcagcagctgagtggatcgggccttctggggaaactgctttccccaacttcacatac
ctagaagtgctagaaaacttagaacacagaccatttaagcaaagaagaccagccttagaa
ctagtgaaaaaggaccacagccgctttgtcaactgtgtgcgattctctcctgatgggaac
agatttgccacagccagtgctgacggccagatatacatctatgacgggaagactggggag
aaggtgtgcgcgctgggcggaagcaaggcccacgacggtgggatttacgcaattagttgg
agtcccgacagcacccatttgctttctgcttctggggacaaaacttccaagatttgggac
gtcagcgtgaactccgtggtcagcacatttcccatgggctccacggttctggaccagcag
ctgggctgcctatggcagaaggaccacctgctcagtgtctccctgtccgggtacatcaac
tatctggacagaaacaaccccagcaagcccctgcacgtcatcaagtgggatggagcagca
ggtatcagcccaggctgcgtgttagaaccacctgggagctctaaaaagcgctggctgctg
acgcccccagaggcactaagtttacagggaagtctcagggcagcaggagcttgcaggcct
ccagaaggaacacccgtgggcatctgggcatggctaggagtgtttctgggccagcactcc
tgggcagggagagagaagaaacctcacaaaccagggcctgaagcgaatgtggccagcgaa
gtcctcctggaccgacccccttgtggctccccgcgacgggtgctggtcggcggggtgcag
gccacgtgtctgcacacgttagagacgggggagaacgactccttcgctgggaaaggccac
acgaaccaggtgtccaggatgaccgtggatgagtcggggcagctcatcagctgcagcatg
gacgacaccgtgcggtacaccagcctcatgctgcgggactacagcggacaaggagttgtg
aaactggacgttcagccaaagtgcgtagccgtcggccccgggggatacgccgtggtcgtg
tgcattggacagattgtcctgctgaaggatcagaggaagtgcttcagcatcgacaacccc
ggctacgagcccgaagttgtggcagtgcaccccggcggggacacggtggcaattgggggt
gtggacggcaacgtccgcctgtattccatcctgggcaccacgctgaaggatgagggcaag
ctcctagaggccaagggccccgtgaccgacgtggcctactcccacgacggcgccttcctc
gcggtgtgcgacgccagcaaggtggtcacagtgttcagcgttgctgacggctactcggag
aacaatgttttttatggacaccatgcaaaaatcgtctgcctggcctggtccccagacaat
gaacactttgcctccggtggcatggacatgatggtgtatgtttggaccctgagtgacccg
gaaaccagagtcaagatccaagatgcacaccggctgcaccatgtcagcagcctggcctgg
ctggacgagcacacgctggtcacgacctcccatgatgcctctgtcaaggagtggacaatc
acctactga

>gi568815594r:9975381_10216234|GENSCAN_predicted_peptide_5|531_aa
MKLKLSDQAGSFDIHHVCHLKPEDSGNTAMTSGTDTGWLLRSILCCNICVVHNTWRFEEN
AYRYTYQHENSDATQGPHQKSSGKHSCLEQFIPRRDRINSDYLVMQTELLFEGSPQPSWS
WQAVPNGGARIPVERSLEQRLEYVELHWSTPEYSLSNPCGFCCSGYGVAVIAFDNANPEC
QVALPLIKGKAHLVEYIKACDSIRASTRQSYAALKLRAFCLGNPRKRCQQERTPACGDSR
ITSRYLKPYEPDAEEEIWEGTRGPPIAAMSRLTVRKTPVPASNTHQAQPLTWGHIKKLTK
MGEENLKSVAYRCGSRILREVAHHDKAAYAFIALQKGKGGLAGHSVGPVPTIRAEQRPKV
RGIHICTFAYPHQKDAPSRAETGIQTSQRLSEVDKGNIPVKFRADSSSSEELPALEEPAS
LKRIYTIVVTTFTSDFAGLVGIESQPGPGHQRQCNRHKRPMELGGVGSTGEVSLQTEKLI
DKDNTCSGTQTNIQDVPGSQSNSMKGPRLQESKALGGFFQRHCSCFVIGYI

>gi568815594r:9975381_10216234|GENSCAN_predicted_CDS_5|1596_bp
atgaagctgaaactttctgaccaagctggcagcttcgacatccatcatgtatgtcatttg
aaacctgaggattctgggaacacagcaatgacttctgggacagatacaggttggctttta
cggtctatcttatgctgtaacatctgcgtggtacacaatacctggaggtttgaagagaat
gcctacagatacacctaccagcacgagaacagtgatgcaacacaaggacctcatcagaag
agttcaggaaagcattcctgcctggagcagttcataccacgcagggatcgaatcaactct
gactacctcgtcatgcaaactgagttgctctttgaagggtctccacaaccgagctggtct
tggcaagcagtgcccaatgggggggctcgaattccagtcgaaaggtcactggagcaacgg
ctggagtacgtggaactacactggagcacacccgagtactctttaagcaatccctgtgga
ttctgctgctcaggatatggtgttgcagttattgcttttgacaatgccaatcctgagtgc
caagttgctctgccacttattaaaggaaaagcacatttggtcgagtatattaaagcttgt
gatagtatcagagccagtacccgccagagttatgctgcactaaagctgcgagccttctgc
ctggggaacccccgcaaaaggtgtcaacaggagcggacccctgcctgcggggacagcaga
attacttctaggtacctgaaaccttatgagccagatgctgaggaagagatttgggaagga
acccgaggacccccgattgcagccatgtcgagactgacagtaaggaagacaccagtcccg
gcaagcaacactcaccaggcacagccactcacctggggccacatcaagaagttgacaaag
atgggagaagaaaatctgaagtctgtagcctacagatgcggatcccgaatcttgcgagaa
gtagcccaccatgacaaagctgcctatgcctttatcgctttacaaaaaggaaaagggggc
cttgctggacattctgtaggcccagtgccaactattagagctgagcaaaggccaaaagtt
agaggcatacatatctgcacctttgcctacccacatcaaaaggatgctcccagcagagct
gagactggaatccagacatcacaaaggttgtctgaagtggacaagggaaacatccctgtg
aaattcagagcagattcatcttcctcagaggaactgcctgccctggaagagcctgcttct
ctcaagaggatttatacaatcgtggtgacaactttcacctcagactttgctggccttgtg
gggatagaatcacaaccagggccaggacaccagaggcagtgcaatcgccacaagaggcct
atggagttgggtggtgtgggatccacgggagaagtatccctgcagacagagaaattgata
gacaaagacaacacctgcagcggcactcagactaacattcaagatgtccctggatcccaa
agcaactccatgaagggaccaagactacaggaatccaaggctcttggaggattctttcaa
cgtcattgctcctgctttgtcattggctatatctga

>gi568815594r:9975381_10216234|GENSCAN_predicted_peptide_6|166_aa
MVEMALSCLLVFSRVLPTFLLPRSDLSDTRTKVLMADLSELDVQPSLSELKRQSFDKSAL
GGDTPSPPGDWVQKSSASSDSGSVYDGPSGHHGVCWASTGVATTKVLELCLASSSAHIPT
KGSSVYELQVWTKAQPCMTVDLVLLSIRDGEQLAAMELVPLRGSPE

>gi568815594r:9975381_10216234|GENSCAN_predicted_CDS_6|501_bp
atggtagagatggccctcagctgccttctggtgttctccagggtacttcctactttcctg
ttgcccaggtctgacttaagtgataccaggactaaggttctcatggctgatctgagtgaa
ctcgacgtacagcccagcctttctgagctgaagagacagtcatttgataagagtgcactt
ggaggtgataccccatcacccccaggagactgggtccagaagtcttcagcttcctctgac
agtggaagtgtgtatgatgggccctctgggcaccacggtgtctgctgggcaagcactgga
gtggccacaacaaaagtccttgagctgtgcttggcatcttcctctgctcatatacctacc
aagggaagctcagtttatgagctgcaggtttggacaaaggcccaaccgtgtatgactgtg
gacttggttctgctgtccatacgagatggtgaacagctggcagcaatggagctggttccc
ctcaggggttcccctgagtga