GENSCAN 1.0	Date run:  5-Nov-116	Time: 13:05:42

Sequence gi568815594r:177331711_177542375 : 210665 bp : 39.38% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2044   2240  197  0  2   44  -12   190 0.443   1.89
 1.02 Intr +   3978   4112  135  0  0   82   98    43 0.738   3.46
 1.03 Intr +   4398   4611  214  0  1   86  106   125 0.938  11.90
 1.04 Term +   5142   5180   39  2  0   63   43    67 0.739  -4.09
 1.05 PlyA +   6450   6455    6                               1.05

 2.00 Prom +   7262   7301   40                              -2.05
 2.01 Init +  13425  13560  136  2  1   54   75   103 0.603   5.95
 2.02 Intr +  21598  22018  421  2  1   84   80   191 0.493   9.98
 2.03 Intr +  28793  28973  181  2  1   69   38   132 0.377   5.25
 2.04 Intr +  49300  49529  230  0  2   91   20   137 0.677   2.94
 2.05 Intr +  50548  50645   98  1  2  107  -34   117 0.483   0.13
 2.06 Term +  52333  52514  182  2  2   54   38   207 0.906   9.09
 2.07 PlyA +  53003  53008    6                               1.05

 3.00 Prom +  57012  57051   40                              -4.75
 3.01 Init +  76282  76358   77  0  2   90  105    15 0.831   4.03
 3.02 Term +  76526  76682  157  2  1   -4   48   203 0.680   3.52
 3.03 PlyA +  80241  80246    6                               1.05

 4.02 PlyA -  80348  80343    6                               1.05
 4.01 Sngl -  83986  83798  189  1  0   53   44   159 0.416   2.86
 4.00 Prom -  93999  93960   40                              -3.55

 5.10 PlyA -  94320  94315    6                               1.05
 5.09 Term - 100098  99998  101  1  2   87   36    45 0.388  -3.49
 5.08 Intr - 101637 101504  134  2  2   53  127   106 0.997  10.37
 5.07 Intr - 102779 102672  108  1  0   28   86   166 0.980   8.88
 5.06 Intr - 105286 105196   91  2  1   60   42    83 0.861  -0.97
 5.05 Intr - 105809 105695  115  2  1   66   19   140 0.551   4.00
 5.04 Intr - 107147 107035  113  0  2   73   63     9 0.363  -3.92
 5.03 Intr - 107978 107866  113  1  2  103   68    74 0.723   6.00
 5.02 Intr - 108716 108563  154  0  1   21   86   253 0.990  16.61
 5.01 Init - 110665 110539  127  1  1   78   80   207 0.954  17.27
 5.00 Prom - 117027 116988   40                              -3.55

 6.03 PlyA - 117775 117770    6                               1.05
 6.02 Term - 132954 132825  130  2  1   91   54    75 0.135   1.07
 6.01 Init - 139686 139427  260  0  2  104   53   278 0.259  22.56
 6.00 Prom - 150947 150908   40                              -5.25

 7.00 Prom + 163683 163722   40                              -3.65
 7.01 Sngl + 164149 164382  234  0  0   97   36   206 0.285   9.24
 7.02 PlyA + 164683 164688    6                               1.05

 8.05 PlyA - 166055 166050    6                               1.05
 8.04 Term - 168917 168502  416  0  2   82   46   234 0.555  13.04
 8.03 Intr - 169242 169010  233  2  2   75   60    62 0.075  -1.41
 8.02 Intr - 169754 169577  178  0  1   67   37   131 0.084   3.96
 8.01 Init - 173171 172988  184  2  1   37   25   180 0.125   5.93
 8.00 Prom - 182910 182871   40                              -4.45

 9.00 Prom + 190156 190195   40                              -3.85
 9.01 Init + 195062 195159   98  1  2   64   97     3 0.053  -1.37
 9.02 Intr + 205088 205272  185  2  2   77   47   108 0.038   4.11
 9.03 Intr + 208565 208861  297  0  0   42  101   185 0.122  11.12
 9.04 Term + 210311 210372   62  0  2   74   48    96 0.702   1.19
 9.05 PlyA + 210600 210605    6                              -1.75


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 168972 168960   13  0  1   94  101    19 0.819   3.20


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_1|194_aa
DLLGSYVFKFIRKIDEPSLDTDGSSLGQVSISESTVSKAQDLRKRQRPVQVKPEQVNAHP
WTRQLWIHFGMKGFIMINPLEYKYKNGASPVLEVQLTKDLICFFDSSVELRNSMESQQRI
RMMKELDVCSPEFSFLRAESEVKKQKGRMLGDVLMDQNVLPGVGNIIKNEALFDSGLHPA
VKLLVTLEAAVVEG

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_1|585_bp
gatctccttgggtcctacgtctttaaattcatcagaaaaattgacgaacccagcttggat
actgatggatctagcttgggacaggtgtccatttctgaatcaactgtatcaaaggcacag
gatctgagaaaacgacagagacctgttcaggttaagcctgaacaggttaatgcccaccct
tggaccaggcaactgtggattcatttcggaatgaaaggcttcatcatgattaatccactt
gagtataaatataaaaatggagcttctcctgttttggaagtgcagctcaccaaagatttg
atttgtttctttgactcatcagtagaactcagaaactcaatggaaagccaacagagaata
agaatgatgaaagaattagatgtatgttcacctgaatttagtttcttgagagcagaaagt
gaagttaaaaaacagaaaggccggatgctaggtgatgtgctaatggatcagaacgtattg
cctggagtagggaacatcatcaaaaatgaagctctctttgacagtggtctccacccagct
gttaaactgttggtgacattagaagctgctgttgtggaaggatag

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_2|415_aa
MFILLAMEVWKKKHLSLPGKDKEVFLKEAVFELSIERNRNSSKTRDSVLKSEENSTVFSH
LMKYPCNTFGKPHTEVKINRKTAFGTTTLVLTDFSNKSSTLERKTKQNQILDEEFQNSPP
ASVCLNDIQHPSKKTTNDITQPSSKVNISPTISSESKLFSPAHKKPKTAQYSSPELKSCN
PGYSNSELQINMTDGPRTLNPDSPRCSKHNRLCILRVVGKDGENKGRQFYACPLPREAQC
GFFEVCPNGQWCVSSSISPLPCSSPRLRDYLGPATASGAWSSCPLLAKAEGHSVAAFPGT
HVCWVLSSCPTFMKNEVMLTTEGSQCDGSGCPGRSAAAIISISESKLIRKHSQSHILETE
KSEIKVPVDLVSGESLISATKMAPRYCILTRQKDKAALFSPFYKGINPIHEVGAL

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_2|1248_bp
atgtttatcctactggcaatggaagtatggaagaagaaacacttaagtctacctgggaag
gacaaggaagtctttctgaaagaggcagtctttgagcttagtatagaaagaaataggaat
tcatcaaagacaagagattcagtgctcaagagtgaagaaaattctactgtctttagccac
ttaatgaagtacccgtgtaatacttttggaaaacctcatacagaagtcaagatcaacaga
aaaactgcatttggaactacaactcttgtcttgactgattttagcaataaatccagtact
ttggaaagaaaaacaaagcaaaaccagatactagatgaggagtttcaaaactctcctcct
gctagtgtttgtttgaatgatatacagcacccctccaagaagacaacaaacgatataact
caaccatccagcaaagtaaacatatcacctacaatcagttcagaatctaaattatttagt
ccagcacataaaaaaccgaaaacagcccaatactcatcaccagagcttaaaagctgcaac
cctggatattctaacagtgaacttcaaattaatatgacagatggccctcgtaccttaaat
cctgacagccctcgctgcagtaaacacaaccgcctctgcattctccgagttgtggggaag
gatggggaaaacaagggcaggcagttttatgcctgtcctctacctagagaagcacaatgt
ggattttttgaagtatgtcccaatggacagtggtgtgttagcagctcaatcagccccttg
ccctgctctagtccacggctgcgggactacctcggccccgccactgcttccggtgcatgg
agcagctgccctctgctggcaaaggcagagggccacagtgttgcagcctttccaggcacc
catgtttgctgggtcctgagctcttgtcccacattcatgaagaatgaggtcatgctgaca
actgaaggcagccagtgtgatggcagtggctgccctggacggtccgccgctgccatcatc
agcatctctgaatctaaattgatcagaaaacactctcaatcacatattctggagactgag
aagtctgagatcaaggttccagtagatttggtgtctggtgaaagcctgatctccgctacc
aagatggcacctcgttactgcatcctcacacggcagaaggataaggcagctctgttcagc
cccttttataagggtattaatcccattcatgaggttggagccttataa

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_3|77_aa
MAQAFCSLTWGSWPHGFQGMERWAMRSTAGTGLDLEGGSQWRVCDGSNQQWRTVSESSAR
ARTNTDQKSAQLQDIIE

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_3|234_bp
atggcacaagccttttgttccctgacctggggttcttggcctcacggattccagggaatg
gaacgttgggccatgaggagcacagcaggcaccgggctggatctggagggtggaagtcag
tggcgggtctgcgacggcagcaatcagcagtggcggacggtgagtgaaagctcagctcga
gccagaacaaacacggaccagaagagcgcgcagttgcaagatataatagagtga

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_4|62_aa
MDDFEGFETPVGKVTADVVEIAKELELEVKPDDVTALLKFHDKTLTDEKLLLRDEQKSSF
VR

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_4|189_bp
atggatgactttgaggggtttgagactccagtggggaaagtaacagcagatgtggtagaa
atagcaaaagaactagaattagaagtgaagcctgatgatgtgactgcattgctaaaattt
catgataaaacattaacagatgagaagttgcttcttagggatgagcaaaaaagtagtttc
gtgagatga

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_5|351_aa
MARKSNLPVLLVPFLLCQALVRCSSPLPLVVNTWPFKNATEAAWRALASGGSALDAVESG
CAMCEREQCDGSVGFGGSPDELGETTLDAMIMDGTTMDVGAVGDLRRIKNAIGVARKVLE
HTTHTLLVGESATTFAQSMGFINEDLSTTASQALHSDWLARNCQPNYWRNVIPDPSKYCG
PYKPPGILKQDIPIHKETEDDRGHDTIVLEPEKFKNRALASGKGHPKVEVKRMRQEIGRV
GDSPIPGAGAYADDTAGAAAATGNGDILMRFLPSYQAVEYMRRGEDPTIACQKVISRIQK
HFPEFFGAVICANVTGSYGAACNKLSTFTQFSFMVYNSEKNQPTEEKVDCI

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_5|1056_bp
atggcgcggaagtcgaacttgcctgtgcttctcgtgccgtttctgctctgccaggcccta
gtgcgctgctccagccctctgcccctggtcgtcaacacttggccctttaagaatgcaacc
gaagcagcgtggagggcattagcatctggaggctctgccctggatgcagtggagagcggc
tgtgccatgtgtgagagagagcagtgtgacggctctgtaggctttggaggaagtcctgat
gaacttggagaaaccacactagatgccatgatcatggatggcactactatggatgtagga
gcagtaggagatctcagacgaattaaaaatgctattggtgtggcacggaaagtactggaa
catacaacacacacacttttagtaggagagtcagccaccacatttgctcaaagtatgggg
tttatcaatgaagacttatctaccactgcttctcaagctcttcattcagattggcttgct
cggaattgccagccaaattattggaggaatgttataccagatccctcaaaatactgcgga
ccctacaaaccacctggtatcttaaagcaggatattcctatccataaagaaacagaagat
gatcgtggtcatgacactattgttctggagcctgagaagttcaagaacagggcactggca
tctggcaagggccatcccaaggtggaagtcaagagaatgagacaggaaatcggccgtgta
ggagactcaccaatacctggagctggagcctatgctgacgatactgcaggggcagccgca
gccactgggaatggtgatatattgatgcgcttcctgccaagctaccaagctgtagaatac
atgagaagaggagaagatccaaccatagcttgccaaaaagtgatttcaagaatccagaag
cattttccagaattctttggggctgttatatgtgccaatgtgactggaagttacggtgct
gcttgcaataaactttcaacatttactcagtttagtttcatggtttataattccgaaaaa
aatcagccaactgaggaaaaagtggactgcatctaa

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_6|129_aa
MPPSWAYTLAGRHAGGLMSRGAHQQKKKLLDIVKNTSVEEDTSYFSTRLSRARQRESTPI
GAATPAGHQPAGRGRVWRRQSKESRGHGMSLSNLHLQKIITVPVGMEDNRNKSKVEAGTP
TTSRCGQCG

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_6|390_bp
atgcccccatcctgggcttataccctagcaggtagacacgcaggcggcctgatgtcaaga
ggagcacatcagcagaaaaagaagctgctggacatcgtgaagaacacatcggtggaagaa
gacacaagctatttctcgacaaggctgtcgagagcacgccagcgggagagcacgccaata
ggcgctgccacgccagcaggccatcaaccggcgggacgaggcagagtttggcggaggcag
tcaaaggagagccggggccatggaatgtcattatctaacttacatttgcaaaaaataatt
acagttccagtgggcatggaagacaatagaaacaagtcaaaagtagaagcaggaacacca
acaacaagccgctgtggccaatgtgggtga

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_7|77_aa
MPEPPTPSVGSCAARASRMSATPCSTVPSPIDHPRAEECGPMAQDWQAAPPAAPVRDPLG
EASWAPEFGGDVENLYV

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_7|234_bp
atgcctgagcctcccaccccctccgtgggctcctgtgcagcccgggcctcccggatgagc
gccaccccctgctccacggtgcccagtcccatcgaccacccaagggctgaggagtgcggg
cccatggcacaggactggcaggcagctccacctgcagcccctgtgcgggatccactgggg
gaagccagctgggctcctgagtttggtggggacgtggagaatctttatgtctag

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_8|336_aa
MRRNQKTNPEGSSTPPKNHTSSPAIDPNQEEIPDLPEKEFKRLVIKLIREGPEKGKAQAR
HVLEVLARAIRQEKEIKGIQISKEKIRLSLFDDDVIAYLENPKDSSRKLLELIKEFSKVS
RIRKNNSKIHREPKKSLHSQSKIKQKNKSGGITLPDFKLYYKATVTKTARYWHKNRHIDQ
CNRIENTEINPNTYVSGIDVQMCPEFLPSGGSVVALTSGVKLQTFTVSVTALKGGTSGLF
IPSSGFMVSLASGLKLQTFTVSVTVHKGGMSGVVCSTCPELFVPPSGFMVSLASGVKLQT
FVVSVTAHKGDADPNSEQQQNLLRRVKQQTFHGRGR

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_8|1011_bp
atgagaaggaaccagaaaaccaaccctgaaggctcttcaacaccccccaaaaatcatact
agttcaccagcaatagacccaaaccaagaagaaatccctgatttacctgaaaaagaattc
aagaggttagttattaagctaatcagggagggaccagagaaaggcaaagcccaggcccgg
catgtactggaagtcctagccagagcaatcagacaagagaaagaaataaagggcatccaa
atcagtaaagagaaaatcagactgtcactgtttgatgatgatgtgattgcttaccttgaa
aaccctaaggactcctccagaaagctcctagaactgataaaagaattcagcaaagtttcc
agaattagaaaaaacaattctaaaattcatagggaaccaaaaaagagcctgcatagccaa
agcaagattaagcaaaagaacaaatctggaggcatcacactacctgattttaaactatac
tataaggccacagtcaccaaaacagcacggtactggcataaaaataggcacatagaccaa
tgtaacagaatagagaacacagaaataaacccaaatacttatgtgtccggaattgatgtt
cagatgtgtccagagtttcttccttctggtgggtccgtggtcgcactgacttcaggagtg
aagctgcagaccttcacggtgagtgttacagctcttaaaggcggcacgtctggattgttc
attccttccagtgggttcatggtctcgctggcctcaggactgaagctgcagactttcaca
gtgagtgttacagttcataaaggtggcatgtccggagtggtttgctccacctgtccggag
ttgttcgtccctcccagtgggttcatggtctcgctggcttcaggagtgaagctgcagacc
tttgttgtgagtgtaacagctcataaaggtgacgcagacccaaacagtgagcagcaacaa
aatttattgcgaagagtgaaacaacaaacgttccacgggcgtggaaggtga

>gi568815594r:177331711_177542375|GENSCAN_predicted_peptide_9|213_aa
MQMTSFIYLDAVVNSLSWDPINVPVPTLFFKPKHALPREEESREAVWPQWLCQAVVGSAQ
SELSRGFVYTVRGKTPTQASVIVDASPPPRWSVPEFIPSGGFLVSLTSRTKPRTRTMSVT
ALKDGVCRVCTFRCSDVSGVPSGEFMVLLTSGVKLQTFAVSVTALKGGTSGVVCSSQWVR
GLADFRNEAADPHGLFECGDAMWKLGLLEVGYD

>gi568815594r:177331711_177542375|GENSCAN_predicted_CDS_9|642_bp
atgcagatgacatcatttatctatcttgacgcagttgtaaattctctctcatgggatcca
ataaatgtccctgtccccactctcttttttaaacctaaacatgccctgcccagagaggag
gaatctagagaggcagtctggccacagtggctttgccaagctgtggtgggctctgcccag
tccgaactttccagaggctttgtttacactgtgaggggaaaaacgcctactcaagcgtca
gtaattgtggacgcctctcccccaccaagatggagtgtcccagaatttattccttctggt
gggttcttggtctcgctgacttcaagaacgaagccacggacccgcacgatgagtgttaca
gctcttaaagatggtgtgtgcagagtttgtaccttcagatgttcagatgtgtctggagtt
ccttctggtgagttcatggtcttgctgacttcaggagtgaagctgcagaccttcgcagtg
agtgttacagctcttaaaggtggcacgtctggagttgtttgttcctcccagtgggttcgt
ggtctcgctgacttcaggaatgaagccgcagaccctcatgggctcttcgaatgtggtgat
gccatgtggaagctggggcttttggaagttggttatgattga