GENSCAN 1.0	Date run:  8-Nov-116	Time: 09:42:51

Sequence gi568815594r:144014689_144240635 : 225947 bp : 37.62% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.13 PlyA -   1124   1119    6                               1.05
 1.12 Term -   6701   6643   59  0  2   79   45    81 0.058  -0.23
 1.11 Intr -  10674  10636   39  1  0  121   93    31 0.049   4.18
 1.10 Intr -  33459  33355  105  1  0   91   46   133 0.529   8.67
 1.09 Intr -  45798  45654  145  0  1   33  106   146 0.542   9.83
 1.08 Intr -  48552  48473   80  1  2   64  106    56 0.256   3.35
 1.07 Intr -  75073  74963  111  2  0   53   83    75 0.206   2.93
 1.06 Intr -  76332  76168  165  1  0   44   96    66 0.130   2.01
 1.05 Intr -  84174  84096   79  0  1   62   98    54 0.035   2.01
 1.04 Intr - 102251 102166   86  0  2   99  100    40 0.864   4.92
 1.03 Intr - 105093 104998   96  1  0   87   96   115 0.066  11.26
 1.02 Intr - 117969 117846  124  0  1   71   69    60 0.147   1.64
 1.01 Init - 123583 123473  111  1  0   33  111    64 0.310   3.46
 1.00 Prom - 133724 133685   40                              -2.75

 2.02 PlyA - 134484 134479    6                               1.05
 2.01 Sngl - 135981 135172  810  0  0   70   44   352 0.945  24.53
 2.00 Prom - 136928 136889   40                              -6.15

 3.03 PlyA - 137097 137092    6                               1.05
 3.02 Term - 138271 138008  264  1  0   66   44   250 0.691  12.92
 3.01 Init - 139353 139315   39  0  0  111   49    61 0.393   4.74
 3.00 Prom - 145133 145094   40                              -0.95

 4.03 PlyA - 145250 145245    6                               1.05
 4.02 Term - 149506 149056  451  0  1   34   48   263 0.726  10.57
 4.01 Init - 158551 158502   50  1  2   73   87    36 0.206   2.47
 4.00 Prom - 159019 158980   40                              -4.45

 5.07 PlyA - 159159 159154    6                               1.05
 5.06 Term - 164772 164546  227  1  2  119   44    76 0.335   2.26
 5.05 Intr - 181200 180924  277  0  1   45   85   112 0.391   2.77
 5.04 Intr - 183905 183592  314  0  2   23   51   285 0.160  13.28
 5.03 Intr - 191384 191333   52  2  1   83  115    23 0.009   2.06
 5.02 Intr - 214950 214797  154  2  1   37  105    74 0.074   3.15
 5.01 Init - 219506 219451   56  2  2   35  115    37 0.577   1.94
 5.00 Prom - 221566 221527   40                              -3.65

 6.02 PlyA - 221942 221937    6                               1.05
 6.01 Term - 224715 224309  407  1  2   66   49   186 0.692   6.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  70207  70287   81  0  0  120   51   119 0.946   8.11
S.002 Init - 149948 149785  164  2  2   52   70    89 0.868   2.75
S.003 Init - 186079 186010   70  1  1   86   78    29 0.881   2.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:144014689_144240635|GENSCAN_predicted_peptide_1|399_aa
MTFMLNVEQGDGANPENSGKRGQKAEGRARAKILKQQRKDFALWPKLDCNGTVIAYFSLE
LLDSSDSPASASQVAETSDTHKRDTYAATPRAHEVSEISVRTVYPPEEETEITLIIFGVM
AGVIGTILLISYGIRRLIKDTADLTEMAGSEISEGPQDAHTSERTGEFPDPQLAGHATEV
WFLCLATRSSNTLREGEHADRQVQELEKVLLGSRPVVGSKGNDTKQTTKDMKKMNFRHRT
SVAQKSDCRERGIKQNGALTQKSKSKGSSETRPGSSTYEPVKSKCKQGSGKIPGGEVALC
AAQKLRPHHGITKPPDLQGCAKIQNECLTAKVEKLSSTKPVSDAIKLGDRCSSDDKKMLP
TVIMVSNGKSGIPSSFGSIAAMDLHTGGNLKLGYDIGYP

>gi568815594r:144014689_144240635|GENSCAN_predicted_CDS_1|1200_bp
atgacatttatgctaaatgtggaacaaggagacggagccaaccctgaaaattctgggaaa
agaggacagaaggcagagggaagagcaagagcaaaaattctgaaacagcagagaaaagat
tttgctctgtggcctaagctggactgcaacggcacagtcatagcttacttcagtcttgaa
ctgctggattcaagtgattctccagcttctgcctctcaagtagctgagacttcagatacg
cacaaacgggacacatatgcagccactcctagagctcatgaagtttcagaaatttctgtt
agaactgtttaccctccagaagaggaaaccgagataacactcattatttttggggtgatg
gctggtgttattggaacgatcctcttaatttcttacggtattcgccgactgataaaggac
acagcagatcttactgagatggctgggtcagaaatctctgagggaccccaggatgcccac
acctcagaaaggacaggggagttccctgacccccaacttgcaggacatgcaacagaggtg
tggtttctctgtttggccaccaggagctcaaacaccttacgggagggagagcatgcagat
aggcaggtgcaagagctggagaaagtgcttttgggctccagacccgtggtaggatctaag
ggaaatgacaccaagcaaacaacaaaagatatgaaaaaaatgaatttcagacaccggaca
tcagtagcacagaagagtgattgccgagagagaggaatcaaacaaaatggagcattaacc
caaaagtccaagtccaaaggctcatctgagacaagaccaggttcttccacctatgagcct
gtaaaatcaaaatgcaaacaaggaagtggcaagatcccaggaggagaagtggctctgtgt
gcagctcagaaactgagaccacaccatggtatcacaaagccaccggacctccagggctgt
gctaaaatacagaatgagtgtcttactgctaaagtggaaaaattgtcttccacgaaacca
gtctctgatgccataaagcttggggaccgctgctctagtgatgataagaagatgctgccc
actgtgataatggtcagtaatggtaaatcagggattccttcttcatttggatccattgct
gcaatggacctccatactggagggaacctgaagctaggatatgacataggttacccgtag

>gi568815594r:144014689_144240635|GENSCAN_predicted_peptide_2|269_aa
MDKFLHTYTVPRLNQEFESLNRPITGSEIEAIINSLPTKKSPGPHGFTAKFYQRYEEELV
PLLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN
RIQQYIKKLIRHDQVGFISGMQGWFNIQKSINVIQHINRTKDKNYMIISIDAEKAFDKIQ
QPFMLKTLNKLGIDGTHLKIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNI
VLEVLARAIRQEKEIKGIELGSQIVPVCR

>gi568815594r:144014689_144240635|GENSCAN_predicted_CDS_2|810_bp
atggataaattcctccacacatacaccgtcccaagactaaaccaggaatttgaatctctg
aatagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaaaag
agtccaggaccacatggattcacagccaaattctaccagagatacgaggaggagctggta
cctttacttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattt
tatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaat
tttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaac
cgaatccagcagtacatcaaaaagcttatccgccatgatcaagtgggcttcatctctggg
atgcaaggctggttcaacatacaaaaatcaataaacgtaatccagcatataaacagaacc
aaagacaaaaactacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaa
caacccttcatgctgaaaactctcaataaattaggtattgatgggacacatctcaaaata
agagctatctatgacaaacccacagccaatatcatactgaatggacaaaaactggaagca
ttccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacata
gtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggcattgaatta
ggaagtcaaattgtccctgtttgcagatga

>gi568815594r:144014689_144240635|GENSCAN_predicted_peptide_3|100_aa
MAEQEQLQSTAPSERSSSPATEQSWMENDFDELREEGFRRSNYSELKEEVQTNGKEVKNR
EKKLDEWITKITNAEKSLKDLMDLKTKARELCDECTSHSS

>gi568815594r:144014689_144240635|GENSCAN_predicted_CDS_3|303_bp
atggccgaacaagaacagctccagtctacagctcccagcgaacgcagctcctcaccagca
acggaacaaagctggatggagaatgactttgatgagttgagagaagaaggcttcagaaga
tcaaactactctgagctaaaggaggaagttcaaaccaatggcaaagaagttaaaaaccgt
gaaaaaaaattagacgaatggataaccaaaataaccaatgcagagaagtccttaaaggac
ctgatggatctgaaaaccaaggcacgagaactatgtgacgaatgcacaagccacagtagc
tga

>gi568815594r:144014689_144240635|GENSCAN_predicted_peptide_4|166_aa
MSIFPDPQRYQCIVVPRGSSAVRGTSTCRDEKEPTQELWHLKWPEYLMSSKYTNSPTRVL
NQAELAEMTEVEFRLWIGMKTIEIQENGKSQSKETKNNNNMTQELTDKITSIKKSLTHLI
ELKNTLQEFPNAITSINSRTDQAEERILELEDWLSEITQTKIKKKE

>gi568815594r:144014689_144240635|GENSCAN_predicted_CDS_4|501_bp
atgagcatttttccagatccacaaagataccaatgcatcgtggtccccagaggcagctca
gcagttagaggaacatccacatgcagagatgagaaagaaccaacacaagaactctggcac
ctcaaatggccagagtatcttatgtcctccaaatacactaattctccaacaagggttctt
aaccaggctgagttagctgaaatgacagaagtagaattcagactatggataggaatgaag
actattgagattcaggagaatggcaaaagccaatccaaggaaactaagaataacaataat
atgacgcaggagctgacagacaaaataaccagtataaaaaagagcctaacacatctgata
gagctgaaaaacacactacaagaatttcccaatgcaatcacaagtattaacagcagaaca
gaccaagctgaggaaaggatcttggaacttgaagactggctctctgaaataacacagaca
aaaataaagaaaaaagaatga

>gi568815594r:144014689_144240635|GENSCAN_predicted_peptide_5|359_aa
MLSDLRLAIKGYSLLSGPSFVRQGTTDKTEESKGMSRQLLTHSCTDAREMKQQAGEGDRV
QNGQRVYSYELLEDGDWQEKSRRFWSPDDFEGFKTSVEKVTPNVVEIARELKLEVEHEGV
TELLQSYHKTWTDEKLILINEQRKWSLEMEFMSDEDAVNPVEMTTMDFEYYIVDKAPVEF
ETIDINFERSSNAPPPTLGITIPHEIWEGTQIQTISTGKPKTSHDPLYCDIHIIVVVWNG
TYSISEVCLQYVQAPRVSNQLTKLSYSLWPWFPRVIPTYPEKREGPIATASVSAVSGQIC
LEGEESSHSIPPLSEHVFYSIAGLLFYLLPGNPIPAPTDFIVDVVQAAGLKANSDSSKV

>gi568815594r:144014689_144240635|GENSCAN_predicted_CDS_5|1080_bp
atgctttcagacctgagacttgccattaagggctatagccttctctctggcccaagcttt
gtgcgacaagggactacagacaagacagaagaaagtaagggcatgagcagacagctcctc
actcactcttgcactgatgctagggagatgaagcaacaagctggggagggagacagagtt
cagaatggccagagggtctatagttatgagctactagaggatggagactggcaggagaaa
agcagaaggttctggagtccagatgactttgaggggttcaagacttcagtggagaaagtc
actcccaatgtggtggaaatagcaagagaactaaaattagaagtggaacatgaaggtgtg
actgaattgctgcaatcttatcataaaacctggacagatgagaagttgattcttatcaat
gagcaaagaaaatggtctcttgagatggaatttatgtctgatgaagatgctgtgaaccct
gttgaaatgacaacaatggatttcgaatattacatagttgataaagcaccagtagagttt
gaaacgattgacattaattttgaaagaagttctaatgctcctcctccaacactggggatc
acaattccacatgagatttgggaggggacacaaatccaaactatatctactgggaaacca
aaaacttcacatgacccactttattgtgatattcacattattgtggtggtctggaatgga
acctacagtatctctgaggtatgcctgcagtatgttcaggcacccagagtcagcaatcag
ctcacaaagttgtcctattctctgtggccctggttccccagggtgatccctacatatcct
gagaagcgtgaaggccccattgctactgcctcagtatcagcagtatcaggacaaatatgc
cttgagggagaagaatcatcccattccattccacctctctcagaacatgtcttctacagt
atagctgggcttttattttaccttctaccaggaaaccccatacctgcccccacagatttc
atagtagatgtggtacaggctgcaggactgaaagcaaactcagacagcagcaaagtgtag

>gi568815594r:144014689_144240635|GENSCAN_predicted_peptide_6|135_aa
XLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKASG
YKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLK
EIKEDTNGRTFHAHG

>gi568815594r:144014689_144240635|GENSCAN_predicted_CDS_6|408_bp
ntgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtattcaatta
ggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaac
cccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagcctcagga
tacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaag
gaaataaaagaggatacaaatggaagaacattccatgctcatgggtag