GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:15:25

Sequence gi568815594r:143897539_144240635 : 343097 bp : 37.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     20     15    6                               1.05
 1.02 Term -  10074  10007   68  1  2   83   42    80 0.529   0.02
 1.01 Init -  14515  13978  538  1  1   58   70   320 0.615  22.27
 1.00 Prom -  19287  19248   40                              -3.65

 2.04 PlyA -  20052  20047    6                               1.05
 2.03 Term -  26590  26456  135  1  0   77   34   137 0.939   4.24
 2.02 Intr -  29030  28906  125  0  2   74   36    39 0.202  -3.32
 2.01 Init -  33055  32872  184  1  1   56   86   125 0.673   8.43
 2.00 Prom -  35071  35032   40                              -4.55

 3.00 Prom +  35501  35540   40                              -5.65
 3.01 Init +  35555  35973  419  1  2   81   53   194 0.462  11.15
 3.02 Intr +  54916  55045  130  1  1   73   75    52 0.000   2.18
 3.03 Intr +  69550  69641   92  0  2   84   95    79 0.497   6.07
 3.04 Term +  84033  84321  289  0  1   68   39   217 0.900   8.66
 3.05 PlyA +  84717  84722    6                               1.05

 4.06 PlyA -  85759  85754    6                               1.05
 4.05 Term -  86228  86016  213  2  0   79   43   104 0.142   1.25
 4.04 Intr - 101911 101873   39  1  0   68   91    56 0.075   1.40
 4.03 Intr - 103069 102846  224  2  2   24  -19   196 0.011  -0.58
 4.02 Intr - 112929 112806  124  0  1   65   69    58 0.041   0.84
 4.01 Init - 119374 119264  111  1  0   33  107    90 0.114   5.66
 4.00 Prom - 120680 120641   40                              -6.25

 5.13 PlyA - 121132 121127    6                               1.05
 5.12 Term - 123851 123793   59  0  2   79   45    81 0.060  -0.23
 5.11 Intr - 127824 127786   39  1  0  121   93    31 0.050   4.18
 5.10 Intr - 150609 150505  105  1  0   91   46   133 0.529   8.67
 5.09 Intr - 162948 162804  145  0  1   33  106   146 0.542   9.83
 5.08 Intr - 165702 165623   80  1  2   64  106    56 0.256   3.35
 5.07 Intr - 192223 192113  111  2  0   53   83    75 0.206   2.93
 5.06 Intr - 193482 193318  165  1  0   44   96    66 0.130   2.01
 5.05 Intr - 201324 201246   79  0  1   62   98    54 0.035   2.01
 5.04 Intr - 219401 219316   86  0  2   99  100    40 0.864   4.92
 5.03 Intr - 222243 222148   96  1  0   87   96   115 0.066  11.26
 5.02 Intr - 235119 234996  124  0  1   71   69    60 0.147   1.64
 5.01 Init - 240733 240623  111  1  0   33  111    64 0.310   3.46
 5.00 Prom - 250874 250835   40                              -2.75

 6.02 PlyA - 251634 251629    6                               1.05
 6.01 Sngl - 253131 252322  810  0  0   70   44   352 0.945  24.53
 6.00 Prom - 254078 254039   40                              -6.15

 7.03 PlyA - 254247 254242    6                               1.05
 7.02 Term - 255421 255158  264  1  0   66   44   250 0.691  12.92
 7.01 Init - 256503 256465   39  0  0  111   49    61 0.393   4.74
 7.00 Prom - 262283 262244   40                              -0.95

 8.03 PlyA - 262400 262395    6                               1.05
 8.02 Term - 266656 266206  451  0  1   34   48   263 0.726  10.57
 8.01 Init - 275701 275652   50  1  2   73   87    36 0.206   2.47
 8.00 Prom - 276169 276130   40                              -4.45

 9.07 PlyA - 276309 276304    6                               1.05
 9.06 Term - 281922 281696  227  1  2  119   44    76 0.335   2.26
 9.05 Intr - 298350 298074  277  0  1   45   85   112 0.391   2.77
 9.04 Intr - 301055 300742  314  0  2   23   51   285 0.160  13.28
 9.03 Intr - 308534 308483   52  2  1   83  115    23 0.009   2.06
 9.02 Intr - 332100 331947  154  2  1   37  105    74 0.074   3.15
 9.01 Init - 336656 336601   56  2  2   35  115    37 0.577   1.94
 9.00 Prom - 338716 338677   40                              -3.65

10.02 PlyA - 339092 339087    6                               1.05
10.01 Term - 341865 341459  407  1  2   66   49   186 0.692   6.86

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 187357 187437   81  0  0  120   51   119 0.946   8.11
S.002 Init - 267098 266935  164  2  2   52   70    89 0.868   2.75
S.003 Init - 303229 303160   70  1  1   86   78    29 0.881   2.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_1|201_aa
MLSRQKTKNEVSKPAEVQGKYVKKETSPLLRNLMPSFIQHGPKIPGRTDICLPDSSPNAF
STSGDGVVSRNQSFLRTPIQRTPHKIMRRESNRLSAPSYLARSLADVPREYGSSQSFVTE
VSFAVENGDSGSRYYYSDNFVDGQRKRPLGDRAHEDYRYYEYNHDLFQRMPQNQGRHASA
MDLHTGGNLKLGYDIGYPQDI

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_1|606_bp
atgctgtcccgacagaaaaccaaaaacgaagtgtccaagccggccgaggtgcaggggaag
tacgtgaagaaggagacgtcgcctctgcttcggaatcttatgccttcattcatccagcat
ggtccaaaaattccaggacgaactgatatctgtcttccagattcaagccctaatgccttt
tcaacttctggagatggagtagtttcaagaaaccagagtttccttagaactccaattcaa
agaacacctcataaaataatgagaagagaaagcaacagattatctgcaccttcttatctt
gccagaagtctagcagatgtccctagagagtatggttcttctcagtcatttgtaacggaa
gttagttttgctgttgaaaatggagactctggttcccgatattattattcagacaatttt
gttgatggtcagagaaagcggccacttggagatcgtgcacatgaagactacagatattat
gaatacaaccatgatctcttccaaagaatgccacagaatcaggggaggcatgcttcagca
atggacctccatactggagggaacctgaagctaggatatgacataggttacccgcaggat
atataa

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_2|147_aa
MGRGWNRLEGSEVHRKVKKSLELPRDLLNGCDQNADSEMDSEVQAEVVSDGDEELIGNWS
KDVAGIRMQNCLVGVIWENWSKVHFDMRECHILDAISNSFEISDRNILRNVFRQQDVVER
TLALEPEIHSDNMTPGTDRETLDKFMK

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_2|444_bp
atgggcagaggctggaacagattggaaggatcagaagtacacaggaaggtgaaaaaaagt
ttggaacttcctagagacttgttgaatggttgtgaccaaaatgctgatagtgaaatggac
agtgaagtccaggctgaggtagtttcagatggagatgaggaactgattgggaactggagt
aaagatgtagcaggcatcaggatgcaaaactgtcttgtgggtgtgatttgggaaaactgg
tccaaagtgcattttgacatgagagaatgtcatattctagatgctattagtaactctttt
gaaatctcagatagaaatattttaagaaatgtgttcagacagcaggatgtagtagaaaga
acacttgctttggaaccagaaatccacagtgacaatatgacacctggcactgaccgagaa
accctagacaagttcatgaaatga

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_3|309_aa
MGKDFMSKTPKAMATNAKIDKWDLIKLKSFCTAKETTIRVNRQPKEWEKIFATYSSDKGL
ISRIYDELKRIYKKKTNNPIKKWAKDMNRHFSKEDIYAANRHMKKCSSSLAIREMQIKTT
MRYHLTPVRMAIIKKSGNNRPRDLEEKNGFMVWVQGSPALCSLRSWYPASQLLQLQLWLK
GAKLIEEYSIQKNTSSAKKTQSCREPFHPQSGPRLGPCCGLSVCGSPQNVYIEALPHDVA
VFGDVASKEVTEVKRGDKGRDLIQQDNVIIRRDTRELTPSLSTMQGHSEKMAVYKPGRES
SPEPNPAGL

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_3|930_bp
atgggcaaggacttcatgtctaaaacaccaaaagcaatggcaacaaatgccaaaattgac
aaatgggatctaatcaaactaaagagcttctgcacagcaaaagaaactaccatcagagtg
aacaggcaacctaaagaatgggagaaaatttttgcaacctactcatctgacaaagggcta
atatccagaatctacgatgaactcaaacgaatttacaagaagaaaacaaacaaccccatc
aaaaagtgggcaaaggatatgaacagacacttctcaaaagaagacatttatgcagccaac
agacacatgaaaaaatgctcatcatcactggccatcagagaaatgcaaatcaaaaccaca
atgagataccatctcacaccagttagaatggcgatcattaaaaagtcaggaaacaacagg
cccagagacctagaagagaaaaatggtttcatggtctgggtccagggctcccctgctctg
tgcagcctcaggtcatggtaccctgcatcccagctactccagctccagctgtggctaaaa
ggggccaagcttatagaagagtacagcatacagaaaaatacatcttctgcaaagaaaaca
cagtcatgtagagaacctttccatccccagtctggacccaggcttgggccttgttgtgga
ctaagtgtctgtggctccccacaaaatgtatatattgaagccctaccccatgatgtggct
gtatttggagatgtagcctctaaggaagtaactgaagttaaaagaggtgataagggtaga
gacctgatccaacaggataatgtcattataagaagagacaccagagagcttaccccctct
ctttctaccatgcaaggacacagcgagaagatggctgtctacaagccaggaagagagtcc
tcaccagaaccaaaccctgctggactttga

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_4|236_aa
MTFMLNVEQGDGANPENSGRRGQKAEGRARAKILKQERQDFALWPKLDCNGTVIAYFSLE
LLDSSDSPASASQVAETSVFRGEEEILELLLGGMWENLSFMIRCMSTQSPHSCSLSQLLL
YADKHKRDTCPAHTANEVSEISVTTVSPPEKKNEKRDNLSIVSLYQEYKGLASIPQVKAI
GRPIPAFQFPMESAEAQLCLLWNPSSLSTQPYFLPQKTLNELPDFNLHLRFCCLHI

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_4|711_bp
atgacatttatgctaaacgtggaacaaggagatggagccaaccctgaaaattctgggaga
agaggacagaaggcagagggaagagcaagagcaaaaattctgaaacaggagagacaagat
tttgctctgtggcctaagctggactgcaacggcacagtcatagcttacttcagtcttgaa
ctgctggattcaagtgattctccagcttctgcctctcaagtagctgagacttcagttttc
aggggagaagaagaaattctggagctgctgctgggagggatgtgggagaatttgtctttc
atgatacgctgtatgtccacgcagtcacctcattcttgttccctttctcaacttctctta
tatgcagataagcacaaacgggacacatgtccagctcatactgctaatgaagtttcagaa
atttctgttacaactgtttcccctccagaaaagaaaaacgagaaacgggacaacttgtcc
atcgtttcactgtaccaggaatataaaggcctggcctccataccccaagtcaaggcaatc
ggaaggcccatccctgctttccagttccccatggagtcggcagaggcccaactgtgcctg
ctttggaacccatcttctctctctacccaaccctacttccttcctcagaagactttgaat
gaacttcctgacttcaatctccatctcagattctgctgcctgcacatctga

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_5|399_aa
MTFMLNVEQGDGANPENSGKRGQKAEGRARAKILKQQRKDFALWPKLDCNGTVIAYFSLE
LLDSSDSPASASQVAETSDTHKRDTYAATPRAHEVSEISVRTVYPPEEETEITLIIFGVM
AGVIGTILLISYGIRRLIKDTADLTEMAGSEISEGPQDAHTSERTGEFPDPQLAGHATEV
WFLCLATRSSNTLREGEHADRQVQELEKVLLGSRPVVGSKGNDTKQTTKDMKKMNFRHRT
SVAQKSDCRERGIKQNGALTQKSKSKGSSETRPGSSTYEPVKSKCKQGSGKIPGGEVALC
AAQKLRPHHGITKPPDLQGCAKIQNECLTAKVEKLSSTKPVSDAIKLGDRCSSDDKKMLP
TVIMVSNGKSGIPSSFGSIAAMDLHTGGNLKLGYDIGYP

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_5|1200_bp
atgacatttatgctaaatgtggaacaaggagacggagccaaccctgaaaattctgggaaa
agaggacagaaggcagagggaagagcaagagcaaaaattctgaaacagcagagaaaagat
tttgctctgtggcctaagctggactgcaacggcacagtcatagcttacttcagtcttgaa
ctgctggattcaagtgattctccagcttctgcctctcaagtagctgagacttcagatacg
cacaaacgggacacatatgcagccactcctagagctcatgaagtttcagaaatttctgtt
agaactgtttaccctccagaagaggaaaccgagataacactcattatttttggggtgatg
gctggtgttattggaacgatcctcttaatttcttacggtattcgccgactgataaaggac
acagcagatcttactgagatggctgggtcagaaatctctgagggaccccaggatgcccac
acctcagaaaggacaggggagttccctgacccccaacttgcaggacatgcaacagaggtg
tggtttctctgtttggccaccaggagctcaaacaccttacgggagggagagcatgcagat
aggcaggtgcaagagctggagaaagtgcttttgggctccagacccgtggtaggatctaag
ggaaatgacaccaagcaaacaacaaaagatatgaaaaaaatgaatttcagacaccggaca
tcagtagcacagaagagtgattgccgagagagaggaatcaaacaaaatggagcattaacc
caaaagtccaagtccaaaggctcatctgagacaagaccaggttcttccacctatgagcct
gtaaaatcaaaatgcaaacaaggaagtggcaagatcccaggaggagaagtggctctgtgt
gcagctcagaaactgagaccacaccatggtatcacaaagccaccggacctccagggctgt
gctaaaatacagaatgagtgtcttactgctaaagtggaaaaattgtcttccacgaaacca
gtctctgatgccataaagcttggggaccgctgctctagtgatgataagaagatgctgccc
actgtgataatggtcagtaatggtaaatcagggattccttcttcatttggatccattgct
gcaatggacctccatactggagggaacctgaagctaggatatgacataggttacccgtag

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_6|269_aa
MDKFLHTYTVPRLNQEFESLNRPITGSEIEAIINSLPTKKSPGPHGFTAKFYQRYEEELV
PLLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN
RIQQYIKKLIRHDQVGFISGMQGWFNIQKSINVIQHINRTKDKNYMIISIDAEKAFDKIQ
QPFMLKTLNKLGIDGTHLKIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFNI
VLEVLARAIRQEKEIKGIELGSQIVPVCR

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_6|810_bp
atggataaattcctccacacatacaccgtcccaagactaaaccaggaatttgaatctctg
aatagaccaataacaggctctgaaattgaggcaataattaatagcttaccaaccaaaaag
agtccaggaccacatggattcacagccaaattctaccagagatacgaggaggagctggta
cctttacttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattt
tatgaggccagcatcatcctgataccaaagcctggcagagacacaacaaaaaaagagaat
tttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggcaaac
cgaatccagcagtacatcaaaaagcttatccgccatgatcaagtgggcttcatctctggg
atgcaaggctggttcaacatacaaaaatcaataaacgtaatccagcatataaacagaacc
aaagacaaaaactacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaa
caacccttcatgctgaaaactctcaataaattaggtattgatgggacacatctcaaaata
agagctatctatgacaaacccacagccaatatcatactgaatggacaaaaactggaagca
ttccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaacata
gtgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggcattgaatta
ggaagtcaaattgtccctgtttgcagatga

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_7|100_aa
MAEQEQLQSTAPSERSSSPATEQSWMENDFDELREEGFRRSNYSELKEEVQTNGKEVKNR
EKKLDEWITKITNAEKSLKDLMDLKTKARELCDECTSHSS

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_7|303_bp
atggccgaacaagaacagctccagtctacagctcccagcgaacgcagctcctcaccagca
acggaacaaagctggatggagaatgactttgatgagttgagagaagaaggcttcagaaga
tcaaactactctgagctaaaggaggaagttcaaaccaatggcaaagaagttaaaaaccgt
gaaaaaaaattagacgaatggataaccaaaataaccaatgcagagaagtccttaaaggac
ctgatggatctgaaaaccaaggcacgagaactatgtgacgaatgcacaagccacagtagc
tga

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_8|166_aa
MSIFPDPQRYQCIVVPRGSSAVRGTSTCRDEKEPTQELWHLKWPEYLMSSKYTNSPTRVL
NQAELAEMTEVEFRLWIGMKTIEIQENGKSQSKETKNNNNMTQELTDKITSIKKSLTHLI
ELKNTLQEFPNAITSINSRTDQAEERILELEDWLSEITQTKIKKKE

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_8|501_bp
atgagcatttttccagatccacaaagataccaatgcatcgtggtccccagaggcagctca
gcagttagaggaacatccacatgcagagatgagaaagaaccaacacaagaactctggcac
ctcaaatggccagagtatcttatgtcctccaaatacactaattctccaacaagggttctt
aaccaggctgagttagctgaaatgacagaagtagaattcagactatggataggaatgaag
actattgagattcaggagaatggcaaaagccaatccaaggaaactaagaataacaataat
atgacgcaggagctgacagacaaaataaccagtataaaaaagagcctaacacatctgata
gagctgaaaaacacactacaagaatttcccaatgcaatcacaagtattaacagcagaaca
gaccaagctgaggaaaggatcttggaacttgaagactggctctctgaaataacacagaca
aaaataaagaaaaaagaatga

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_9|359_aa
MLSDLRLAIKGYSLLSGPSFVRQGTTDKTEESKGMSRQLLTHSCTDAREMKQQAGEGDRV
QNGQRVYSYELLEDGDWQEKSRRFWSPDDFEGFKTSVEKVTPNVVEIARELKLEVEHEGV
TELLQSYHKTWTDEKLILINEQRKWSLEMEFMSDEDAVNPVEMTTMDFEYYIVDKAPVEF
ETIDINFERSSNAPPPTLGITIPHEIWEGTQIQTISTGKPKTSHDPLYCDIHIIVVVWNG
TYSISEVCLQYVQAPRVSNQLTKLSYSLWPWFPRVIPTYPEKREGPIATASVSAVSGQIC
LEGEESSHSIPPLSEHVFYSIAGLLFYLLPGNPIPAPTDFIVDVVQAAGLKANSDSSKV

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_9|1080_bp
atgctttcagacctgagacttgccattaagggctatagccttctctctggcccaagcttt
gtgcgacaagggactacagacaagacagaagaaagtaagggcatgagcagacagctcctc
actcactcttgcactgatgctagggagatgaagcaacaagctggggagggagacagagtt
cagaatggccagagggtctatagttatgagctactagaggatggagactggcaggagaaa
agcagaaggttctggagtccagatgactttgaggggttcaagacttcagtggagaaagtc
actcccaatgtggtggaaatagcaagagaactaaaattagaagtggaacatgaaggtgtg
actgaattgctgcaatcttatcataaaacctggacagatgagaagttgattcttatcaat
gagcaaagaaaatggtctcttgagatggaatttatgtctgatgaagatgctgtgaaccct
gttgaaatgacaacaatggatttcgaatattacatagttgataaagcaccagtagagttt
gaaacgattgacattaattttgaaagaagttctaatgctcctcctccaacactggggatc
acaattccacatgagatttgggaggggacacaaatccaaactatatctactgggaaacca
aaaacttcacatgacccactttattgtgatattcacattattgtggtggtctggaatgga
acctacagtatctctgaggtatgcctgcagtatgttcaggcacccagagtcagcaatcag
ctcacaaagttgtcctattctctgtggccctggttccccagggtgatccctacatatcct
gagaagcgtgaaggccccattgctactgcctcagtatcagcagtatcaggacaaatatgc
cttgagggagaagaatcatcccattccattccacctctctcagaacatgtcttctacagt
atagctgggcttttattttaccttctaccaggaaaccccatacctgcccccacagatttc
atagtagatgtggtacaggctgcaggactgaaagcaaactcagacagcagcaaagtgtag

>gi568815594r:143897539_144240635|GENSCAN_predicted_peptide_10|135_aa
XLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKASG
YKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLK
EIKEDTNGRTFHAHG

>gi568815594r:143897539_144240635|GENSCAN_predicted_CDS_10|408_bp
ntgttggaagttctggccagggcaatcaggcaggagaaggaaataaagggtattcaatta
ggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattgtatatctagaaaac
cccattgtctcagcccaaaatctccttaagctgataagcaacttcagcaaagcctcagga
tacaaaatcaatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagag
agccaaatcatgagtgaactcccattcacaattgcttcaaagagaataaaatacctagga
atccaacttacaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaag
gaaataaaagaggatacaaatggaagaacattccatgctcatgggtag