GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:21:46

Sequence gi568815594r:113114049_113314393 : 200345 bp : 36.44% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2548   2722  175  0  1   14   48   190 0.354   7.16
 1.02 Term +   5634   5731   98  1  2   60   43    83 0.218  -1.85
 1.03 PlyA +   6132   6137    6                               1.05

 2.00 Prom +  12684  12723   40                              -5.25
 2.01 Init +  31821  31955  135  2  0   83  106   158 0.778  17.29
 2.02 Intr +  60368  60469  102  1  0   75  110   115 0.045  11.85
 2.03 Term +  67372  67671  300  0  0   28   43   178 0.007   1.54
 2.04 PlyA +  68902  68907    6                               1.05

 3.00 Prom +  78318  78357   40                              -5.85
 3.01 Init +  78903  78998   96  2  0   54   46   135 0.981   6.26
 3.02 Intr +  82320  82418   99  2  0  105   87   149 0.996  15.89
 3.03 Intr +  84963  85061   99  2  0   61   66   111 0.863   5.59
 3.04 Term +  85741  85833   93  0  0   98   37    19 0.219  -5.35
 3.05 PlyA +  86732  86737    6                               1.05

 4.03 PlyA -  87792  87787    6                               1.05
 4.02 Term -  94337  94217  121  1  1  121   36    81 0.701   3.17
 4.01 Init - 100345 100002  344  1  2   75   75   363 0.650  30.45
 4.00 Prom - 114487 114448   40                              -6.35

 5.00 Prom + 114495 114534   40                              -4.85
 5.01 Init + 115643 115645    3  1  0   91   89     0 0.604   0.45
 5.02 Intr + 118113 118211   99  2  0   75   94    76 0.648   6.29
 5.03 Intr + 119855 119905   51  1  0  104   92     6 0.630   0.79
 5.04 Intr + 122939 123124  186  1  0   70   75   201 0.960  15.96
 5.05 Intr + 126437 126535   99  1  0   82   51   144 0.559   9.49
 5.06 Intr + 128063 128161   99  1  0   52   96    77 0.532   4.29
 5.07 Intr + 135716 135814   99  1  0   85  113    82 0.997   9.79
 5.08 Intr + 141687 141884  198  2  0   61   57   264 0.980  19.23
 5.09 Intr + 144002 144100   99  1  0   84   60    96 0.963   5.79
 5.10 Intr + 144265 144363   99  0  0   72   68    71 0.524   2.89
 5.11 Intr + 150849 150947   99  2  0   95   73    76 0.027   6.19
 5.12 Intr + 163789 163887   99  0  0   68   98   180 0.989  16.39
 5.13 Intr + 164412 164510   99  2  0   60  100    80 0.961   5.79
 5.14 Intr + 166424 166480   57  1  0   65   95    44 0.655   0.96
 5.15 Intr + 168627 168824  198  2  0   98   61   189 0.971  15.83
 5.16 Intr + 173557 173655   99  0  0   82   98   138 0.999  13.59
 5.17 Intr + 174340 174438   99  0  0   67   98    71 0.975   5.39
 5.18 Intr + 178368 178466   99  2  0   83   91   140 0.999  13.19
 5.19 Intr + 179392 179490   99  0  0  127   79   167 0.964  19.09
 5.20 Intr + 188719 188791   73  0  1   89   90    89 0.337   7.26
 5.21 Intr + 197207 197452  246  0  0   75   50   186 0.348  10.01

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  61426  61372   55  1  1   85   91    32 0.810   4.70
S.002 Sngl - 153279 153019  261  0  0   71   47   209 0.885  10.01


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594r:113114049_113314393|GENSCAN_predicted_peptide_1|90_aa
MNLGEGKGCEMKKAGIHVMCYSRAAVATAVTAVARQQQQQQQQSPLARLHHFLLTLHRVP
LTNETVYLKNSDEIHPNADKSQLWGLKENK

>gi568815594r:113114049_113314393|GENSCAN_predicted_CDS_1|273_bp
atgaaccttggagaaggaaagggctgtgagatgaaaaaggcaggaattcatgtcatgtgc
tacagcagagcagccgtagcaacggcagtaacagcagtagcacggcagcagcagcagcag
cagcagcagagtcctttagcgagactgcaccattttcttctcaccctgcatagagtgcct
cttactaatgaaactgtttatttgaaaaattcagatgagatccaccccaatgcagataaa
agccaattatggggcttgaaagaaaataaataa

>gi568815594r:113114049_113314393|GENSCAN_predicted_peptide_2|178_aa
MGNAALCSSCHADKSIRAQGNMQELDKTPDYYGCNSEDVKEPGVWSDSNASFLRAARAGN
LDKVVEYLKGGIDINTCNQARYLFIYLLKHVLCVYSVAGSVLGAGDGAVQRDKNSALIKL
TIYNLREEKAVSDMEENTAGEKERGVEWERCVTLEGMDRRKPKEIEQGGRACCGGSTL

>gi568815594r:113114049_113314393|GENSCAN_predicted_CDS_2|537_bp
atggggaatgcagccctctgctcttcttgccatgcggataagagcataagagcacaagga
aacatgcaggaactggataaaaccccagactactatggctgtaacagtgaggacgtcaaa
gaacctggagtgtggtctgacagcaatgcaagcttcctccgtgctgccagagcaggcaac
ctggacaaagttgtggaatatctgaaggggggcatagacatcaatacctgcaatcaggca
cgctatttgttcatctacttactcaaacatgtattgtgtgtttactcagtggcaggctct
gtcctaggtgctggggatggagcagtgcagagagacaaaaactctgctctcataaagctc
acaatctacaacctgagagaagaaaaggcagtaagtgatatggaggaaaatacagcaggg
gagaaggagagaggggtggaatgggagcggtgtgtcactttagaggggatggacagaaga
aaacctaaagaaattgagcaaggaggccgtgcatgctgtggagggagcacactttag

>gi568815594r:113114049_113314393|GENSCAN_predicted_peptide_3|128_aa
MGLDREKRSVAKKGATIRGARRDSAMDEVEILNGLNALHLAAKEGHVGLVQELLGRGSSV
DSATKKGNTALHIASLAGQAEVVKVLVKEGANINAQSQGFLLCLSDNTDYIMEDISKISQ
LCSIYSLG

>gi568815594r:113114049_113314393|GENSCAN_predicted_CDS_3|387_bp
atggggctagacagggagaaaagatcagtggccaaaaagggagctaccatccggggcgct
agacgggactccgctatggatgaagtggagatcctgaatggactcaacgctctccatctg
gctgccaaggaaggccacgtggggctggtgcaggagctgctgggaagagggtcctctgtg
gattctgccactaagaagggaaataccgctcttcacattgcatctttggctggacaagca
gaagttgtcaaagttcttgttaaggaaggagccaatattaatgcacagtctcagggtttt
ctcctttgcctttctgataacacagactatatcatggaggatattagcaaaataagccag
ctctgttccatctattctttgggataa

>gi568815594r:113114049_113314393|GENSCAN_predicted_peptide_4|154_aa
MTKKRRNNGRAKKGRGHVQPIRCTNCARCVPKDKAIKKFVIRNIVEAAAVRDISEASVFD
AYVLPKLYVKLHYCVSCAIHSKVVRNRSREARKDRTPPPRFRPAGAAPRPPPKPMPSSSS
ALKLVLNQSYNSPLFSIIQTTTTPFQANITSYME

>gi568815594r:113114049_113314393|GENSCAN_predicted_CDS_4|465_bp
atgacaaagaaaagaaggaacaatggtcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaactgtgcccgatgcgtgcccaaggacaaggccattaagaaattcgtc
attcgaaacatagtggaggccgcagcagtcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtatgtgaagctacattactgtgtgagttgtgcaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccccacgtcccccaccaaagcccatgccatcatcatcaagt
gctctgaaactggtccttaatcagtcttataacagtccccttttctccatcatccagacc
actactactccattccaagctaacatcacctcttatatggagtag

>gi568815594r:113114049_113314393|GENSCAN_predicted_peptide_5|767_aa
MNGFTPLYMAAQENHIDVVKYLLENGANQSTATETLVLSMITMGISSGRAQDGFTPLAVA
LQQGHNQAVAILLENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKSGFTPLH
IAAHYGNVNVATLLLNRGAAVDFTARNGITPLHVASKRGNTNMVKLLLDRGGQIDAKTRD
GLTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPV
DDVTLDYLTALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLV
KYGASIQAITESGLTPIHVAAFMGHLNIVLLLLQNGASPDVTNIRGETALHMAARAGQVE
VVRCLLRNGALVDARARKGFTPLHVAAKYGSLDVAKLLLQRRAAADSAGKNGLTPLHVAA
HYDNQKVALLLLEKGASPHATAKPVNEHEPFIFGATPRGLQMNGYTPLHIAAKKNQMQIA
STLLNYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMSTKSGLTSLHLAAQE
DKVNVADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLLKQGANVNAKTKNGYTPL
HQAAQQGHTHIINVLLQHGAKPNATTANGNTALAIAKRLGYISVVDTLKVVTEEVTTTTT
TITEKHKLNVPETMTEVLDVSDEEGDDTMTGDGGEYLRPEDLKELGDDSLPSSQFLDGMN
YLRYSLEGGRSDRYLIKLIIDVSQKYVQHIFYDDDKNVDAIIEHLIX

>gi568815594r:113114049_113314393|GENSCAN_predicted_CDS_5|2301_bp
atgaatggctttactcctttatacatggctgcccaagagaatcacattgatgttgtaaaa
tatttgctggaaaatggagctaatcagagcactgctacagagacactagttctgtccatg
attaccatgggaatatcttcaggcagagctcaggatggctttactcctctagctgtggca
ctccagcaaggacacaaccaggcggtggccatcctcttggagaatgacaccaaagggaaa
gtgaggctgccagctctgcatattgccgctaggaaagacgacaccaaatctgccgcactt
ctgcttcagaatgaccacaatgctgacgtacaatccaagagtggttttacccctttgcac
atagctgcacattacggaaatgtcaacgtggcaactcttcttctaaaccggggagctgct
gtggacttcacagccaggaatggaatcactcctctgcatgtggcttccaaaagaggaaat
acaaacatggtgaagctcttactggatcgaggcggtcagatcgatgccaaaactagggat
gggttgacaccacttcactgtgctgcacgaagtgggcatgaccaagtggtggaacttctg
ttggaacggggtgcccccttgctggcaaggactaagaatgggctgtctccactacacatg
gctgcccagggagaccacgtggaatgtgtgaagcacctgttacagcacaaggcacctgtt
gatgatgtcaccctagactacctgacagccctccacgttgctgcgcactgtggccactac
cgtgtaaccaaactccttttagacaagagagccaatccgaacgccagagccctgaatggt
tttactccactgcacattgcctgcaagaaaaaccgcatcaaagtcatggaactgctggtg
aaatatggggcttcaatccaagctataacagagtctggcctcacaccaatacatgtggct
gccttcatgggccacttgaacattgtcctccttctgctgcagaacggagcctctccagat
gtcactaacattcgtggtgagacggcactacacatggcagcccgagccgggcaggtggaa
gtggtccgatgcctcctgagaaatggtgcccttgttgatgccagagccaggaagggtttt
actcccctgcatgtagcagccaagtatggaagcctggatgtggcaaaacttctcttgcaa
cgccgtgctgccgcagattctgcagggaagaacggccttaccccgctccatgttgctgct
cattatgacaaccagaaggtggcgctgctgttactggagaagggtgcttcccctcatgcc
actgccaagcctgtcaatgaacatgagcccttcatctttggggccactcctagagggctc
cagatgaatggctatactccgttacatattgctgccaagaagaatcaaatgcagatagct
tccacactcctgaactatggagcagagacaaacattgtgacaaagcaaggagtaactcca
ctccatctggcctcgcaggaggggcacacagatatggttaccttgcttctggataaggga
gccaatatccacatgtcaactaagagtggactcacatccttacaccttgcagcccaggaa
gataaagtgaatgttgctgatattctcaccaagcatggagctgatcaggatgctcataca
aagcttggttacacacctttaattgtggcctgtcactatggaaatgtgaaaatggtcaac
tttcttctgaagcagggagcaaatgttaacgcaaaaaccaagaacggctacacgcctttg
caccaggccgctcagcagggtcacacgcacatcatcaacgtcctgctccagcatggggcc
aagcccaacgccaccactgcgaatggcaacactgccttggcgattgctaagcgtctgggc
tacatctccgtggtcgacaccctgaaggttgtgactgaggaggtcaccaccaccaccaca
actattacagaaaaacacaaactaaatgtacctgagacgatgactgaggttcttgatgtt
tctgatgaagagggtgatgacacaatgactggtgatgggggagaataccttaggcctgag
gacctaaaagaactgggtgatgactcactacccagcagtcagttcctggatggtatgaat
tacctgcgatacagcttggagggaggacgatctgacaggtatctcataaaacttataatt
gatgtcagccagaagtatgtgcaacatattttttatgatgatgataaaaatgtagatgca
attattgagcatttaatagnn