GENSCAN 1.0	Date run:  7-Nov-116	Time: 16:56:12

Sequence gi568815594f:188039559_188247369 : 207811 bp : 44.01% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.15 PlyA -    178    173    6                              -0.45
 1.14 Term -   2855   2795   61  1  1   72   49    85 0.124   0.28
 1.13 Intr -   7983   7891   93  2  0   32  105   102 0.225   5.38
 1.12 Intr -  24698  24629   70  0  1   89  105    38 0.458   3.84
 1.11 Intr -  42047  41975   73  2  1   95   83    10 0.008   0.18
 1.10 Intr -  50973  50941   33  0  0   82   95    37 0.016   2.22
 1.09 Intr -  52383  51827  557  1  2   81   -9   285 0.013  10.66
 1.08 Intr -  57603  57503  101  2  2   98   89    29 0.910   3.75
 1.07 Intr -  57788  57766   23  2  2  100  113     1 0.966   0.14
 1.06 Intr -  59617  59477  141  1  0    9  116   127 0.206   8.15
 1.05 Intr -  65374  65279   96  1  0   64   82    30 0.175   0.21
 1.04 Intr -  65871  65622  250  2  1   59   90    76 0.201   2.34
 1.03 Intr -  66029  65927  103  0  1   75   36   137 0.509   6.43
 1.02 Intr -  81706  81679   28  1  1   98   58    14 0.024  -2.91
 1.01 Init -  86953  86870   84  1  0   56  109    60 0.491   5.72
 1.00 Prom -  89921  89882   40                              -5.56

 2.00 Prom +  95335  95374   40                              -5.56
 2.01 Init +  99267  99277   11  2  2   84   92     9 0.268   0.91
 2.02 Intr + 100126 100408  283  1  1   83   52   205 0.268  13.82
 2.03 Intr + 102694 102924  231  0  0   76   78   162 0.856  11.97
 2.04 Intr + 104280 104302   23  2  2   94  102    10 0.854  -0.66
 2.05 Intr + 104478 104575   98  0  2   96   92    45 0.820   5.35
 2.06 Term + 107264 107814  551  0  2   83   55   358 0.775  26.46
 2.07 PlyA + 107914 107919    6                               1.05

 3.00 Prom + 119457 119496   40                              -4.76
 3.01 Sngl + 139260 139778  519  2  0   55   54   304 0.680  17.75
 3.02 PlyA + 140213 140218    6                               1.05

 4.03 PlyA - 143387 143382    6                               1.05
 4.02 Term - 158229 158107  123  0  0   93   48    63 0.504   1.18
 4.01 Init - 159643 159566   78  1  0   56   81    52 0.668   2.36
 4.00 Prom - 168059 168020   40                              -3.36

 5.03 PlyA - 168427 168422    6                               1.05
 5.02 Term - 169241 169118  124  1  1   92   54    63 0.867   1.16
 5.01 Init - 174339 174230  110  0  2   77   52   171 0.976  12.09
 5.00 Prom - 197911 197872   40                              -3.56

 6.02 PlyA - 198435 198430    6                               1.05
 6.01 Term - 207089 206925  165  2  0   37   39   189 0.562   6.82

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term -  52383  51815  569  1  2   81   33   277 0.945  16.08


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815594f:188039559_188247369|GENSCAN_predicted_peptide_1|570_aa
MRPKKSGILYTRQWSHKRTTASAEKNEQVKFCVKAILGSCQKFVGFEESRAPTRSVCVDL
FPWIFVDSEVANAGRYLSRSIQSSLQLGTPTRMSKRLSPQLQHNITEDAYCETHLEPTRL
FCDVDQITLCSKCFQSQEHKHHMVCGIQEAAENYRKLFQEILNTSREKLEAAKSILTDEQ
ERMAMIQRLGRVGRENMEKLKESEARASEQVRSLLKLIVELEKKCGEGTLALLKNAKYSL
ERSKSLLLEHLEPAHITDLSLCHIRGLSSMFRVLQRHLTLDPETAHPCLALSEDLRTMRL
RHGQQDGAGNPERLDFSAMVLAAESFTSGRHYWEVDVEKATRWQVGIYHGSADAKGSTAR
ASGEKVLLTGSVMGTEWTLWVFPPLKRLFLEKKLDTVGVFLDCEHGQISFYNVTEMSLIY
NFSHCAFQGALRPVFSLCIPNGDTSPDSLTILQHGPSCDATEQFDLLEEARQIGELCGHS
RYSEIQENFVFEKEGGALPHLSWRALTRIVDAVTAPRTFRYFKDARTPRKLEKGIEEQYV
LATQKLCLFSWGALCGSDPTAVSAVDVYGS

>gi568815594f:188039559_188247369|GENSCAN_predicted_CDS_1|1713_bp
atgaggcccaagaaatccggaattctctacacaaggcaatggtctcacaagcggacaact
gcctcggcagagaaaaatgaacaggttaagttctgtgtcaaagctattctaggcagctgc
cagaaatttgttggatttgaggagtccagagcgccgacccgctctgtctgcgtggactta
tttccttggatcttcgtggactctgaagttgccaatgcagggagatacctcagtagaagc
atacagtccagtcttcaactagggacccctaccaggatgtccaaaaggctcagccctcag
ttacagcacaacatcacagaagatgcctattgtgaaacacacctggaaccaacacggctg
ttctgtgatgttgaccaaatcacactctgcagcaaatgcttccagtcccaggagcacaaa
catcacatggtgtgtgggatacaagaggctgctgagaattacaggaagttattccaggaa
atattgaacacatcgagggagaaacttgaagcagctaaaagcatattgactgatgagcaa
gaaagaatggcgatgattcagagactgggccgtgtggggagagagaacatggagaaactg
aaggagagtgaagccagggcttctgaacaggtccgcagcctcctaaagctcatcgtggag
cttgagaaaaagtgtggggaaggcaccttggcattgctcaagaatgcaaaatactcttta
gaaaggagcaagtcactgctgcttgagcatctggagcccgctcatatcacagacctgagt
ttatgccacataagaggactcagcagcatgttcagagtactccagagacatttaacattg
gatcctgaaacagctcatccctgcctggcactatctgaggacctgagaactatgagattg
agacatgggcagcaggatggggctggcaacccagaaagattggatttcagtgccatggtg
ctggctgcggagagcttcacctcagggaggcactactgggaggtggacgtggaaaaggca
accaggtggcaagtgggcatataccacggctctgcagacgcgaagggcagcacggccaga
gcttccggagagaaagtcttgctcacggggtcggtgatggggaccgagtggactctctgg
gtcttcccccctctgaaaaggctcttcctggaaaagaagttggacacagttggcgttttc
cttgactgcgaacacgggcagatatcattctacaatgtgaccgagatgtccctcatttac
aatttctcccattgcgccttccaaggagctctcaggcctgtgttttccctctgtatccca
aatggagacacaagtccagactccctcaccatcttacaacatggtccttcttgtgatgct
actgaacaatttgatttattagaagaagcccgacagataggagaactatgtggtcattcc
agatactcagagatacaagagaactttgtatttgaaaaagagggtggagctctaccccac
ctgtcctggagagctctgacccgaatcgtggacgccgtcactgcaccacggacattccga
tattttaaggatgccaggacgccgcggaagctggagaaaggaattgaggagcagtacgtg
ctggccacacaaaaactatgtttatttagctggggagctttgtgcggctccgaccccacg
gcggtgtctgcggtggatgtttacggctcctga

>gi568815594f:188039559_188247369|GENSCAN_predicted_peptide_2|398_aa
MADGSWEEHNTPLSCPECWRTLEGPHFQSNERLGRLASIARQLRSQVLQSEDEQGSYGRM
PTTAKALSDDEQGGSAFVAQSHGANRVHLSSEAEEHHREETKTCKQVVVSEYMKMHQFLK
EEEQLQLQLLEQEEKENMRKLRNNEIKLTQQIRSLSKMIAQIESSSQSSAFESLEEVRGA
LERSEPLLLQCPEATTTELSLCRITGMKEMLRKFSTEITLDPATANAYLVLSEDLKSVKY
GGSRQQLPDNPERFDQSATVLGTQIFTSGRHYWEVEVGNKTEWEVGICKDSVSRKGNLPK
PPGDLFSLIGLKIGDDYSLWVSSPLKGQHVREPVCKVGVFLDYESGHIAFYNGTDESLIY
SFPQASFQEALRPIFSPCLPNEGTNTDPLTICSLNSHV

>gi568815594f:188039559_188247369|GENSCAN_predicted_CDS_2|1197_bp
atggcagatgggagctgggaggaacataacacacctttatcttgtcctgagtgctggagg
accttggagggcccgcatttccagtcaaacgagcgtctggggaggctggccagcatcgcc
aggcagctccggtcccaggtgctgcagagcgaggatgagcagggcagctacgggaggatg
cccaccactgccaaggcgctctccgatgacgagcagggtggaagcgccttcgtagcccag
agccatggtgcaaacagagtgcatctctccagcgaggctgaggagcatcacagagaagaa
acaaagacttgtaaacaggttgttgtgtcagaatacatgaaaatgcaccagttcctgaag
gaagaggagcagctgcaactccagctactagaacaggaagagaaagagaacatgaggaag
ctgaggaacaatgagatcaaactgacccagcaaatcagaagcctaagcaaaatgatcgca
cagattgagtcctcaagtcaaagctcggctttcgaatctcttgaggaagtgagaggagcc
ctggaaaggagcgagccactcttgcttcagtgtccagaggccaccaccacagagctgagt
ctgtgccgcatcacgggaatgaaggagatgctaagaaaattcagcacggagataacgctg
gacccagccacagctaatgcctatctcgtgttgtcggaggatctgaagagtgtgaaatat
gggggaagcagacagcagctacccgacaacccggaaagatttgaccagtctgcgactgtg
ctgggtactcagatcttcaccagtgggagacactactgggaggtggaggtgggaaacaag
accgagtgggaagtgggcatctgcaaggactctgtgagcagaaaggggaatctccccaag
ccacctggggacctgttctcactaataggtttaaaaatcggagatgattacagcctctgg
gtctcgtcacctttgaaaggtcagcacgtcagagagcctgtgtgtaaggttggtgtcttc
ctggactatgaatctggacatatagcattctacaacgggacggatgaatccctcatctac
agcttcccgcaggcttctttccaagaggccctcaggcctatcttttccccctgcctccca
aatgaggggacaaacacagaccctctcaccatctgctcactgaacagccacgtctga

>gi568815594f:188039559_188247369|GENSCAN_predicted_peptide_3|172_aa
MCCLPSLALSASSASASALATLEEPFSRLLHCGSPFLGWPRLELVPSAYGEVWRKRRGRE
PGLPAAPMGQRGLGGPCIQSSWQAPPAPGSEGLSTRASSCGRCAGYPSTAGPPRPHSNSC
RASAASPQGRVQALQPAMPEFPLRCGLLRGPSLPYERCPLLHGAGSHRLPKG

>gi568815594f:188039559_188247369|GENSCAN_predicted_CDS_3|519_bp
atgtgctgcctgccctcgctcgctctcagtgcctcctcggcctcagcgtccgctctggcc
acacttgaggagcccttcagccggctgctgcactgtgggagcccctttctgggatggcct
agactggagctggttccctctgcttacggggaggtgtggaggaagaggcgagggcgggaa
ccggggctgcccgcggcgcccatgggccagcgagggctcggcgggccctgcattcagagc
agctggcaggcgccgcccgccccgggcagtgaggggcttagcacccgggccagcagctgc
ggaaggtgcgccgggtaccccagcactgccggcccacccaggccgcactccaattcttgc
cgggcctcagctgcctccccgcagggcagggttcaggccctacagcctgccatgcctgag
tttcccctccgctgcgggctcctgcgcggcccgagcctgccctacgagcgctgtcccctg
ctccatggcgccgggtcccatcgactgcccaagggctga

>gi568815594f:188039559_188247369|GENSCAN_predicted_peptide_4|66_aa
MNTEVISDDATGFRVEKKVTLAFKSPVSCSSARLDLLPYCKDRRLSVPWVLALVYQKNQI
TRGLGE

>gi568815594f:188039559_188247369|GENSCAN_predicted_CDS_4|201_bp
atgaacactgaagtcatttcggatgatgcaacagggttcagggtggagaaaaaagtgacc
ctggcttttaaatctccagtgtcgtgttcatcagctcgattagatcttctgccttattgc
aaggacaggcggctttctgtaccctgggttcttgccttggtgtaccagaaaaatcagatc
acacgtgggcttggagaatga

>gi568815594f:188039559_188247369|GENSCAN_predicted_peptide_5|77_aa
MEVDEEGVVTKLHQTSTVGQKNMDKSQTGSATLYYRETRNTDQMMRRTSDKFQQRASCRM
IDQYSSKLSRSSKTRKI

>gi568815594f:188039559_188247369|GENSCAN_predicted_CDS_5|234_bp
atggaggtggacgaagaaggagttgtcaccaagctgcatcagacctccacagtgggccaa
aagaatatggacaagtcacaaacaggatctgctacactctactacagagaaactcgtaat
accgatcaaatgatgagaagaacatcagataaatttcaacagagggcatcctgcagaatg
attgaccagtactcctcaaaactgtcaaggtcctcgaaaacaaggaaaatctga

>gi568815594f:188039559_188247369|GENSCAN_predicted_peptide_6|54_aa
PRTLLRHTEHLLCASIHYTADDDSDNTVNETDAKSSPCEASVQSINTSYGQNEY

>gi568815594f:188039559_188247369|GENSCAN_predicted_CDS_6|165_bp
ccacgcaccctgttaagacatactgagcacctactctgtgccagcatccattatacagct
gatgatgacagtgacaacaccgtgaacgaaacagatgcaaaatcctctccttgtgaagct
tccgtgcagtcaatcaacacgtcctacgggcaaaatgaatattag