GENSCAN 1.0	Date run:  7-Nov-116	Time: 17:11:55

Sequence gi568815593r:97063064_97283191 : 220128 bp : 38.06% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  21521  21631  111  1  0   69  101    56 0.828   5.26
 1.02 Intr +  23232  23309   78  2  0   92   69    33 0.579   0.63
 1.03 Term +  26765  26875  111  1  0  132   49    92 0.940   7.28
 1.04 PlyA +  27007  27012    6                               1.05

 2.09 PlyA -  27613  27608    6                               1.05
 2.08 Term -  31972  31685  288  1  0   94   43   331 0.985  23.59
 2.07 Intr -  33824  33747   78  2  0   41  110    62 0.732   2.53
 2.06 Intr -  42222  42127   96  0  0   84   82   105 0.996   8.79
 2.05 Intr -  44437  44297  141  1  0   97   75   109 0.930  10.13
 2.04 Intr -  58977  58879   99  0  0   -6   67   126 0.313   0.49
 2.03 Intr -  60348  60295   54  0  0   75   79    52 0.425   1.26
 2.02 Intr -  61566  61403  164  1  2  136  110    59 0.539  11.67
 2.01 Init -  79513  79432   82  1  1   95   93    45 0.578   6.89
 2.00 Prom -  97064  97025   40                              -2.85

 3.12 PlyA -  97825  97820    6                               1.05
 3.11 Term - 100162  99998  165  1  0   55   34   188 0.996   7.03
 3.10 Intr - 102084 101988   97  2  1   47  100    62 0.923   2.39
 3.09 Intr - 104928 104404  525  2  0  106   80   592 0.978  51.33
 3.08 Intr - 105789 105697   93  2  0  116   72    34 0.871   2.76
 3.07 Intr - 108334 108143  192  0  0   50   76   187 0.999  11.39
 3.06 Intr - 110200 110112   89  1  2   59   93    74 0.999   2.85
 3.05 Intr - 114228 114053  176  1  2   70   63    86 0.999   3.04
 3.04 Intr - 114785 114669  117  0  0   51  111   114 0.998   9.52
 3.03 Intr - 116130 115992  139  0  1   88  106    55 0.974   6.42
 3.02 Intr - 120239 120063  177  2  0    4   95   219 0.966  13.39
 3.01 Init - 120906 120808   99  0  0   72   94   111 0.998  10.41
 3.00 Prom - 142525 142486   40                              -4.05

 4.02 PlyA - 142836 142831    6                               1.05
 4.01 Sngl - 144058 143450  609  1  0   44   38   288 0.681  15.34
 4.00 Prom - 155897 155858   40                              -3.65

 5.03 PlyA - 156656 156651    6                               1.05
 5.02 Term - 157442 156832  611  0  2   67   34   255 0.299  11.67
 5.01 Init - 171501 171423   79  0  1   95   75    22 0.398   2.87
 5.00 Prom - 171678 171639   40                              -3.65

 6.02 PlyA - 171961 171956    6                              -0.45
 6.01 Sngl - 172981 172571  411  1  0   60   44   200 0.580   8.84
 6.00 Prom - 173496 173457   40                              -8.15

 7.06 PlyA - 173614 173609    6                               1.05
 7.05 Term - 174658 173724  935  2  2   37   35   474 0.193  28.29
 7.04 Intr - 176575 176438  138  2  0   -5   94   136 0.223   4.41
 7.03 Intr - 177247 177186   62  0  2   33   72    83 0.141  -1.34
 7.02 Intr - 182621 182493  129  1  0   21  103    71 0.037   0.79
 7.01 Init - 186856 186522  335  1  2   93   46   219 0.055  15.02
 7.00 Prom - 206445 206406   40                              -0.95


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl -  94893  94642  252  0  0   75   43   145 0.925   3.54
S.002 Intr + 130279 130523  245  1  2   74  110   101 0.837   7.12
S.003 Term + 191976 192176  201  2  0   71   48   148 0.964   5.51


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_1|99_aa
MVCPEFVPSDVRTFLEFLPYGAFVVSLASRVKLQTFMAIYFRSCESYCQCCDTCNAWDEA
AHVALVKIGSEKRLSGCHFHVTRMLLFLVVLTQTLSKVL

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_1|300_bp
atggtgtgtccagagtttgttccttctgacgttcggacgtttttggagtttcttccttat
ggtgcgtttgtggtctcactggcttcacgagtgaagctgcagaccttcatggccatttat
tttagatcctgtgaatcctactgtcaatgttgtgacacctgcaatgcctgggatgaagct
gcccatgtggccctggtgaaaataggctctgagaagaggcttagtggctgccattttcat
gtcacccgaatgttgctgtttctagtggtactaactcagacactttcaaaagttttgtag

>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_2|333_aa
MDRTLESLRHIIAQVLPHRDPALVFKDLNVVSMLQEFWESKQQQKAAFPSEGVVVYESLP
APGPPFVSYVTLPGGSCFGNFQWSALALATGWETQEEVERTRMRGSEGERKAAIEEEALQ
PTCACRSIIEHPKCCLSRAEARRDAAKVALINSLFNELPSRRITKEFIMESVQEAVASTS
GTLDDADDPSTSVGAYHYMLESNMGKTMLEFQELMTIFQLLHWNGSLKALRETKCSRQEV
ISYYSQYSLDEKMRSHMALDWIMKERDSPGIVSQELRMALRQLEEARKAGQELRFYKEKK
EILSLALTQICSDPDTSSPSDDQLSLTALCGYH

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_2|1002_bp
atggacagaaccttggaatctctgagacacatcattgcccaagtcttgcctcacagagat
ccggctctagtcttcaaagacttgaacgttgtgtcaatgttacaggaattttgggaaagc
aagcagcagcagaaggctgcattcccaagtgaaggtgtggtggtctatgagtcactgcca
gctcctgggcctccctttgtgagttacgtgaccctcccagggggaagctgttttggcaac
tttcagtggtcagccctggctttggccactgggtgggaaacacaggaggaagtggagcgg
acacggatgagaggcagcgaaggggaaagaaaggcagccattgaggaagaggctctccaa
cccacttgtgcctgcaggtccattattgagcatcctaagtgctgcttaagtagagccgag
gccaggcgggatgcagctaaagtggccctgatcaactccctcttcaatgagctgccctct
cgcaggatcaccaaggaattcattatggaaagtgttcaggaagcagtagcctccaccagc
ggcaccttagatgatgcagatgaccccagcaccagtgttggggcctatcactacatgctg
gagtcaaacatggggaagactatgctggagtttcaggagctgatgaccattttccaacta
ttgcactggaatggaagcctaaaagcccttcgtgaaacaaagtgttcccgacaggaagtc
atctcctactattctcagtattctctagatgaaaagatgcgcagccacatggccctggac
tggatcatgaaggagcgggactcaccaggaattgtctctcaagagctacgaatggccctg
aggcagttggaggaagccaggaaagcaggacaagaactacggttttacaaagaaaagaaa
gaaatattgagcttagccctgactcagatctgcagtgaccctgacacttcctcacccagt
gatgatcagctgagccttacggccctgtgtggctatcactag

>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_3|622_aa
MGNYSKILKSLLGPRSPTRVGQPELSKSPLPLERVREPSGAVKRLEAGITTCLTLCGCRR
RGIWVRTGAAMGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCN
KVLRELVKHKLIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIY
IVANEEGQQFALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYE
RKFPVPKPIDYNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFN
EFNLILDESDHITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDI
RREDTLDVEVSASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGS
ENESERNCLEESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVEN
NSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFRDEEN
VGAMNQYRTRTLSITSSGSAVSCSTIPPELVKQKVKRQLTKQQKSAVRRRLQKGEANIFT
KQRRENMQNIKSSLEAASFWGE

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_3|1869_bp
atgggtaactattctaaaatccttaaatcgctcctgggccctcgaagtcctacccgcgta
ggtcagcccgaactatcaaaatccccacttcctctggagcgcgtgcgcgagccatctggc
gctgtaaagcgcttagaggctggaataacgacctgccttacgctttgcggctgtcgtcgg
agaggcatctgggttcggactggggccgccatggggaaagtgaatgtggccaagttgcgt
tacatgagccgagatgacttcagggtcttgaccgcggttgaaatgggcatgaagaaccat
gaaattgttcccggcagtttgattgcttctatagccagccttaaacatggtggctgtaat
aaagttttaagagaattagtgaaacataaactcatagcttgggagcgtaccaaaactgtc
cagggctatcggttgacaaatgcaggatatgattacctagctttgaaaacactttcttct
aggcaagtagttgagtctgttggaaaccagatgggtgttggcaaagaatcagatatttac
attgttgcaaatgaagaaggacaacaatttgcattaaagcttcacagactaggaagaacc
tcgtttcgaaatttgaaaaacaaacgcgattatcataaacataggcacaatgtgtcatgg
ctatatttatctcgtctctctgccatgaaggaatttgcctatatgaaggcattgtatgag
aggaaatttccagttccaaagccaattgattacaatcgtcatgcagtggtcatggaactc
ataaatggttatccactatgtcagatacaccatgttgaagatcctgcatcagtatatgat
gaagctatggaactaattgtcaaacttgcaaatcatgggctgattcatggagattttaat
gaatttaatctcattttggatgaaagtgaccatatcaccatgattgattttccacagatg
gtttcaacttctcatcccaatgctgagtggtattttgacagagatgttaaatgcattaaa
gatttctttatgaaacgtttcagctacgaaagtgagctttttccaacttttaaggatatc
aggagagaagacactcttgatgtggaggtttctgccagtggctacacaaaggaaatgcag
gcagatgatgaactgcttcatccattaggtccagatgataaaaatattgaaacaaaagag
ggatctgaattctcattttcagatggagaagtggcagaaaaagcagaggtttacgggtca
gaaaatgaaagtgaacggaactgtctagaagaatcagagggctgctattgcagatcatct
ggagaccctgaacaaataaaggaagacagtttatcagaagagagtgctgatgcacggagt
tttgaaatgactgaattcaatcaagctttagaagaaataaaagggcaggttgttgaaaac
aactctgtaactgaattttctgaggagaaaaacagaactgaaaattacaacaggcaagat
ggtcagagagttcaaggaggagtccctgctggctctgacgagtatgaagatgaatgccct
catctaattgccttgtcgtcattaaatagagaattcaggcctttcagagatgaagaaaat
gtgggagctatgaatcagtatagaacaagaactctgagtatcacttcttcaggcagtgct
gtaagctgttcaacaattcctccagaactggtgaaacagaaggtgaaacgtcagttgaca
aaacagcaaaaatcagctgtcagacgtcgattgcagaaaggagaagcaaatatatttacc
aagcaacgtagggaaaacatgcaaaatatcaaatcaagtttggaagcagccagcttttgg
ggagaataa

>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_4|202_aa
MKLDPHFSPYRKTNSRYIKDLNLRPETIKILEDNIRKTLLDIGLGKEFMTKNPKANAIKT
KTNRWYLIKLKSFFMGKGAVSRVNRKPTEWEKIFTVYTYDKGLISRIYNELKQISNEKIN
NPIKKWGKDMNRQFSKEDIQIPKKHEKMLNITNEQRNLNQNHNAIPHYSCKIGHNQKNQK
IVDVGMDAENREHFYAAGGNVN

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_4|609_bp
atgaaattggatcctcatttctcaccttatagaaaaaccaactcaagatacattaaggac
ttaaacctaagacctgaaaccataaaaatcctagaagataacattagaaaaacccttcta
gacattggcttaggcaaagagttcatgaccaagaacccaaaagcaaatgcaataaaaaca
aagacaaataggtggtacttaattaaactaaagagctttttcatgggaaaaggagcagtc
agcagagtaaacagaaaacccacagagtgggagaaaatcttcacagtctatacatacgac
aaaggactaatatccagaatctacaatgaactcaaacaaatcagcaacgaaaaaataaac
aatcccatcaaaaagtggggtaaggacatgaatagacagttctcaaaagaagatatacaa
atacccaaaaaacatgaaaaaatgctcaacatcaccaatgaacagagaaatctaaatcaa
aatcacaatgcgataccacactactcctgcaagattggccataatcaaaaaaatcaaaaa
atagtagatgttggcatggatgcggagaacagggaacacttctacgctgctggtgggaat
gtaaactag

>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_5|229_aa
MDEAGNHHSKQLLQGQKTKDCMFSLTVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDM
IIYPENPIVSAQNLLKLISNFSKVSGYKIKVQKSQAFLYTNNRQAESQIMSELPFTIASK
RIKYLGIQLTRDVKDLFKENYKALLKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYK
FNAIPIKLPMTFFTELEENYFKVHMEPKKSPHCQVNPKPKEQSWSHNAT

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_5|690_bp
atggatgaagctggaaaccatcattctaagcaactattgcaaggacagaaaaccaaagac
tgcatgttctcactcacagtgttggaagttctggccagggcaatcaggcaggagaaggaa
ataaagggtattcaattaggaaaagaggaagtcaaattgtctctgtttgcagatgacatg
attatatatccagaaaaccccatcgtctcagcccaaaatctccttaagctaataagcaac
ttcagcaaagtctcaggatataaaatcaaagtgcaaaaatcacaagcattcttatacacc
aataacagacaagcagagagccaaattatgagtgaactcccattcacaattgcttcaaag
agaataaaatacctaggaatccaacttacaagggatgtgaaggacctcttcaaggagaac
tacaaagcactgctcaaggaaataaaagaggatacaaacaaatggaagaacattccatgc
tcatgggtaggaagaatcaatatcgtgaaaatggccatactgcccaaggtaatttataaa
ttcaatgccattcccatcaagctaccaatgactttcttcacagaattggaagaaaactac
tttaaagttcatatggaaccaaaaaagagcccgcattgccaagtcaatcctaagccaaaa
gaacaaagctggagccataacgctacctga

>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_6|136_aa
MSELPFTIVSKRIKYLGIQLTRDVKDLFKENYKALLNEIKEDTNKWKNIPCLWVGRINIV
KMAILLKVIYKFNAIPIKPPMTFFTELEKTTLKFIWNQKRARIAKTILSKKNKAGGITLP
DFKLYYKATVTKTAWY

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_6|411_bp
atgagtgaactcccattcacaattgtttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaagcactgctcaatgaaataaaa
gaggatacaaacaaatggaagaacattccatgcttatgggtaggaagaatcaatatcgtg
aaaatggccatactgctcaaggtaatttataaattcaatgccatccccatcaagccacca
atgactttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaaga
gcccgcattgccaagacaatcctaagcaaaaagaacaaagctggaggcatcacactacct
gacttcaaactatactacaaggctacagtaactaaaacagcatggtactga

>gi568815593r:97063064_97283191|GENSCAN_predicted_peptide_7|532_aa
MEVTQPRVPEPMLAVEDVCVGKDLEQNAEVQARYEDHPHGGAFWHGVSWQSPFEWGGHSH
RGSGLQCSNESICARVVTWCEISACASVKARGVVVRDRAGGEGTAKQGDGLLKACKRDTF
SDKARALISEGFRSDSKGLNLSWEIMSQTMFEASMDCQTVAAEQWVQRTVHEPKQDKTSR
GTIRQQHSRFTTIRCSADTAVADTQANRVWSGPLANSNRPAAPHHTYSKIDHIVGSKALL
SKCKRTEIITNCLSDHSAIKLELRIKNLTQNRSTTWKLNNLLLNDYWVHNEMKAEIKMFF
ETNENKDTTYQNPWDAFKAVCRGKFIALNAHKRKQERSKIDTLTSQLKELEKQGQTHSKA
SRRQEITKIKAELKEIETQRTLQEINESRSWFFERINKIDRPLARLLKKKREKNQIDTIK
NDKGDMTTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTIPRLNQEEVESLNRPIT
GSEIVAIINSLPTKRSPRTRWIHSRILPEVQGGTGTVPSETIPINRKRGNPP

>gi568815593r:97063064_97283191|GENSCAN_predicted_CDS_7|1599_bp
atggaggtgacccagcccagggtgccagagcccatgctggctgtggaggatgtctgtgtg
ggaaaagacctcgagcagaatgctgaagtccaagcaaggtacgaagatcatcctcatgga
ggggcattctggcacggggtatcatggcagagcccatttgagtggggcggacattcccac
agagggtctgggctccagtgcagtaatgagagcatctgtgcaagagtggtgacctggtgt
gagatcagtgcctgtgctagtgtgaaagcaagaggagtggtagtcagagacagagcaggg
ggagaaggaactgccaaacagggagatggcctactgaaggcttgcaaacgtgacacgttc
agtgacaaagcaagggctctaattagcgaagggttccggtctgacagtaaagggcttaac
ctttcttgggaaataatgagccagacaatgtttgaagcctccatggattgccagacagtg
gctgcagaacagtgggtgcagcgcactgtgcacgagccgaagcaggacaaaacttccaga
ggaacgatcagacagcagcattcgcggttcacaacaatccgctgttctgcagacactgct
gttgctgatacccaggcaaacagggtctggagtggacctctagcaaactccaacagacct
gcagcaccacaccacacctattccaaaattgaccacatagttggaagtaaagctctcctc
agcaaatgtaaaagaacagaaattataacaaactgtctctcagaccacagtgcaatcaaa
ctagaactcaggattaagaatctcactcaaaaccgctcaactacatggaaactgaacaac
ctgctcctgaatgactactgggtacataacgaaatgaaggcagaaataaagatgttcttt
gaaaccaacgagaacaaagacacaacataccagaatccctgggacgcattcaaagcagtg
tgtagagggaaatttatagcactaaatgcccacaagagaaagcaggaaagatctaaaatt
gacaccctaacatcacaattaaaagaactagaaaagcaagggcaaacacattcaaaagct
agcagaaggcaagaaataactaaaatcaaagcagaactgaaggaaatagagacacaaaga
acccttcaagaaattaatgaatccaggagctggttttttgaaaggatcaacaaaattgat
agaccgctagcaagactactaaagaagaaaagagagaagaatcaaatagacacaataaaa
aatgataaaggggatatgaccactgatcccacagaaatacaaactaccatcagagaatac
tacaaacacctctacgcaaataaactagaaaatctagaagaaatggataaattccttgac
acatacaccatcccaagactaaaccaggaagaagttgaatctctgaataggccaataaca
ggctctgaaattgtagcaataatcaatagcttaccaaccaaaaggagtcccaggaccaga
tggattcacagccgaattctaccagaggtacaaggaggaactggtaccgttccttctgaa
actattccaattaacagaaaaagagggaatcctccctaa