GENSCAN 1.0	Date run:  5-Nov-116	Time: 18:21:17

Sequence gi568815593r:55430159_55630844 : 200686 bp : 40.70% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Term +    413    715  303  1  0   41   42   218 0.548   6.69
 1.02 PlyA +    959    964    6                               1.05

 2.05 PlyA -   2281   2276    6                               1.05
 2.04 Term -   6417   6224  194  1  2   -7   42   141 0.008  -3.40
 2.03 Intr -   9379   9237  143  0  2   12   87   124 0.009   3.78
 2.02 Intr -  37929  37711  219  2  0   87  109   176 0.824  16.10
 2.01 Init -  41409  41375   35  0  2   67  106    38 0.035   2.89
 2.00 Prom -  42076  42037   40                              -4.45

 3.00 Prom +  46196  46235   40                              -4.35
 3.01 Init +  67017  67065   49  2  1   38   57    67 0.398  -0.24
 3.02 Intr +  67760  67888  129  0  0   74   98    67 0.445   6.05
 3.03 Intr +  80514  80684  171  1  0   70  119    -2 0.302   0.09
 3.04 Term +  91772  91956  185  0  2   70   55   114 0.613   3.02
 3.05 PlyA +  93449  93454    6                               1.05

 4.05 PlyA -  96185  96180    6                               1.05
 4.04 Term - 100545  99998  548  1  2  -10   49   264 0.178   6.15
 4.03 Intr - 104584 104414  171  2  0   -9   79   236 0.174  11.99
 4.02 Intr - 105263 105010  254  1  2   80   52   147 0.307   6.45
 4.01 Init - 109549 109542    8  1  2  114   91     0 0.370   3.45
 4.00 Prom - 114026 113987   40                              -6.15

 5.04 PlyA - 114669 114664    6                               1.05
 5.03 Term - 122121 121838  284  1  2   69   43   233 0.433  11.50
 5.02 Intr - 122361 122246  116  2  2   58   77    86 0.161   3.67
 5.01 Init - 148284 148178  107  0  2   70   92    55 0.419   3.84
 5.00 Prom - 157860 157821   40                              -3.65

 6.02 PlyA - 158631 158626    6                               1.05
 6.01 Sngl - 160139 159318  822  2  0   70   44   289 0.659  18.20
 6.00 Prom - 164441 164402   40                              -7.95

 7.05 PlyA - 165014 165009    6                               1.05
 7.04 Term - 167034 166809  226  2  1   80   36   155 0.515   4.77
 7.03 Intr - 183565 183334  232  2  1   37   48   211 0.001   7.91
 7.02 Intr - 184535 184302  234  0  0   45   22   190 0.000   4.84
 7.01 Intr - 189968 189828  141  0  0   82   92    85 0.170   7.70

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  42428  42644  217  2  1    3   43   288 0.843  11.43
S.002 Term - 141835 141724  112  0  1   61   44   135 0.837   3.45
S.003 Intr + 183091 183354  264  2  0   78   61   161 0.892   8.96


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_1|100_aa
IYLKENILPYEGKFKKLEEVTVKPDVQIPKYGFKKHEEGNMTLPKEHSNFVATDSNEEMC
EISEKEFKIMIQKKLKKLSEIQENSNQKNNTKKSEKPFRI

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_1|303_bp
atatatcttaaggaaaatatcctcccctatgaaggcaaattcaaaaaattggaagaagtg
actgttaaaccagatgtacagataccgaaatacggattcaagaaacatgaagaaggaaat
atgacacttccaaaggaacacagtaattttgtagcaacagattccaatgaagaaatgtgt
gaaatctcagaaaaagaattcaaaataatgattcaaaaaaaattgaaaaagctcagtgag
atacaagaaaacagcaatcagaaaaataatacaaagaaatcagagaaaccatttaggata
tga

>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_2|196_aa
MVSEVKYTEKLKNNYIATIYKAIGTFLFGAAASQSLTDIAKYSIGRLRPHFLDVCDPDWS
KINCSDGYIEYYICRGNAERVKEGRTTLDKFKGVTGQGRNDFQIGQPSESLQIQNDSTAS
KWSGRIYGQKKEICFHAADKDIPKAGQFTQERGLIGLPVPRGLGGLTSMAEGKKEQVTSY
VDGGRQRELVQGNSTL

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_2|591_bp
atggtcagtgaagtcaaatacactgagaagttaaagaataactacatagccactatttac
aaagccattggaacctttttatttggtgcagctgctagtcagtccctgactgacattgcc
aagtattcaataggcagactgcggcctcacttcttggatgtttgtgatccagattggtca
aaaatcaactgcagcgatggttacattgaatactacatatgtcgagggaatgcagaaaga
gttaaggaaggcagaacaactttagataaatttaagggtgtcactgggcaaggaagaaac
gactttcaaattgggcagccctcagagtcactgcagattcagaatgactccactgcttct
aagtggtcagggagaatttatggacagaaaaaggaaatctgttttcatgctgccgataaa
gacatacccaaggctgggcagtttacacaagaaagaggtttaattggactcccagttccc
cgtggcttaggaggccttacaagcatggcggaaggcaagaaggagcaagttacatcttac
gtggatggcggcaggcagagagagcttgtgcagggaaactccaccttataa

>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_3|177_aa
MAAATPRKKKGKKTKRVLSIVQTHLEASLRLLRLRAGKAMTESRSTGAMEDKQNQEGTEA
SIQLLVEPILWCARVEYWTELGSQVYLAGFTSGFLPVTTCGSLGKLLTCLSSVSSSAPSS
KPISPTTDANEPKGKAESAVTSCQLTEGLICYTFPICHFPGHPTLKKTQETFPSSDN

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_3|534_bp
atggcagctgcaacgccaagaaagaagaaaggaaaaaagactaaaagagtgctatccatt
gtccaaacccatctagaagccagtctcaggctcctgagactgagggcagggaaggcaatg
acagaaagcaggtccacaggggcaatggaagataagcagaaccaggagggaacagaagct
tccattcagctactggtggaaccaatcctttggtgtgccagggtggagtactggacagag
ttgggtagtcaagtatatctggctgggtttacttctggctttctcccagttactacttgt
gggagcttgggcaaattacttacctgtctgagctcagtttcctcatctgcaccaagcagc
aaacccatctctcctactactgatgcaaatgaaccaaaaggcaaggcagaatctgccgtg
acaagctgccaattaactgaagggctcatctgctacacgtttcctatatgtcattttcct
ggacaccccaccctgaaaaagactcaggaaacatttccaagcagtgacaactga

>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_4|326_aa
MPSGNNLTCLLPHPHGRGGEWQAAGALGSLGREPSSLKAAMPSGGTEAEFGDHLSNCGPE
QSPLDRNGSRPHAPPGCREPHFWADAAGAVARGRRQPRPGLENQGPRPPSRSSVHRPCRA
ARAETMFDKTRLPYVALDVLCVLLEERACPERALDLENIMRKFSGSCRCCAKQIKFYRMR
LHCKSCKKYQDEYDVSSIIPNFQISEDSVGNSNRSETSTSDNTETYQENTSSSGHPTYKC
PLCQESNFTRERLLDHSNSNHLFQIVPVTCPICVSLPWGDPSQITRNFVSHLNQRHQFDY
GEFVNLQLDEETQCQTAVEESFQVNI

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_4|981_bp
atgcccagtggtaacaatctgacctgtttattacctcatccccatggaaggggtggggag
tggcaggcagccggtgctctaggatcgttgggtagggagcctagctctctgaaagcagca
atgcctagtgggggtaccgaggccgagttcggagaccacctgagcaattgcggtccagag
caaagccccctggatcggaacgggagccgcccccacgccccgcccggctgccgagagccg
cacttctgggcggatgccgcaggggccgtagctcggggccgtcgccagccccggcccggg
ctcgagaatcaagggcctcggccgccgtcccgcagctcagtccatcgcccttgccgggca
gcccgggcagagaccatgtttgacaagacgcggctgccgtacgtggccctcgatgtgctc
tgcgtgttgctggaagagagagcatgccctgaacgggccttagaccttgaaaatataatg
aggaagttttctggtagctgcagatgctgtgcaaaacagattaaattctatcgcatgaga
cttcattgcaaatcttgtaagaagtatcaggatgaatatgatgtttcttctatcattcca
aactttcagatctctgaagattcagtagggaacagcaataggagtgaaacatccacatct
gataacacagaaacttaccaagagaatacaagttcttctggtcatcctacttataagtgt
cccctgtgtcaagaatcaaattttaccagagagcgtttactggatcactctaacagtaat
cacttatttcagatagttcctgtgacatgtcctatttgtgtatctcttccttggggagat
cctagccagattaccagaaatttcgttagtcatctaaatcagagacatcagtttgattat
ggagaatttgtgaatcttcagctagatgaagaaactcaatgtcaaactgctgttgaagaa
tcatttcaagtaaacatctga

>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_5|168_aa
MNGVRQMNFRREITGVLKGHCCISRERIAVEMKMDRPPCSGKGTECQSIAQNFGFQDFSS
GHFLWENIKAKTEVGHYDKPKPWTKICELDLVISLKIPFETLKDRLGCCWIHPPSGRVYN
MDFNPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDMAKPVTELY

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_5|507_bp
atgaatggagttaggcagatgaattttcggagggaaataactggagtgctaaaaggccat
tgctgtattagccgtgagagaattgcagtagaaatgaaaatggacagacccccctgctcg
ggcaagggcaccgagtgccagagcatcgcccagaactttggcttccaggatttctccagt
gggcacttcttgtgggagaacatcaaggccaaaaccgaagttggacattacgacaagccg
aagccctggacaaaaatctgtgaactggatttagtaattagtttgaagattccatttgaa
acacttaaagatcgtctcggctgctgttggattcaccctcctagcggaagggtatataac
atggacttcaatccacctcatgtacatgggattgatgacgtcactggtgaaccattagtc
cagcaggaggatgataaacctgaagcagttgctgccaggctgagacagtacaaggatatg
gcaaagccagtcactgaattatactag

>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_6|273_aa
MDKFLDTPTLPRLNQEEVESLNRRITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEEL
VPLLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILA
NQIQQHIKKLIHHDQVDFIPGMQDWFNISKSINVIQHINRTKYKNHMIISIDAEKAFDKI
QQPFMLKTLNKLGIDRTYLKIIRAIYDKPTANIILHGQKLEAFPLKTGTRQGCPLSPLLF
NIMLEVLAKAIRQEKEIKGIQLGKEEVKLSVCR

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_6|822_bp
atggataaattcctcgacacacccaccctcccaagactaaaccaggaagaagttgaatct
ctgaatagacgaataacgggctctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactg
gtaccactccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactca
ttttatgaggccagcatcatcctgataccaaagcctggcagagacacaaccaaaaaagag
aattttagaccaatatccttgatgaacattgatgcaaaaatcctcaataaaatactggca
aaccaaatccagcagcacatcaaaaagcttatccaccatgatcaagtggacttcatccct
gggatgcaagactggttcaatataagcaaatcaataaatgtaatccagcatataaacaga
accaaatacaaaaaccacatgatcatctcaatagatgcagaaaaggcctttgacaaaatt
caacaacccttcatgctaaaaactctcaataaattaggtattgataggacgtatctcaaa
ataataagagctatctatgacaaacccacagccaatatcatactgcatgggcaaaaactg
gaagcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattc
aacataatgttggaagttctggccaaggcaattaggcaggagaaggaaataaagggtatt
caattaggaaaagaggaagtcaaattgtccgtttgcagatga

>gi568815593r:55430159_55630844|GENSCAN_predicted_peptide_7|277_aa
XINNQVILPGVTEMPGYCPFLLPVSTECCAVATSYTCFEEKNIGQCCRVKLQTFAVSVTA
FKAAHLELFIHPSRFMVSLASGVKLQTFAVSITAHKGSADPKSEQQQDLLQIVKEQSFRS
VEGDPTLGQSMGSGAADQGAALVGEARATQEPTAVGGGSGMAGCRSRALPREEEAEARRE
FEHSTCGPALLGDPHTLHSCWPRDGQCRRSARGWWDGSSQTQLCSVSTMWLSNKAAMTRV
AKTMCWEPGVDEFLVYIRKTATEFATTVINMQDSSWR

>gi568815593r:55430159_55630844|GENSCAN_predicted_CDS_7|834_bp
ngcatcaacaaccaggtcatccttccaggtgtcaccgaaatgccaggctattgccccttc
ctgctgcctgtctcaactgaatgctgtgctgtggccacatcatacacatgttttgaagag
aagaatataggacaatgttgcagagtgaagctgcagaccttcgcagtgagtgttacagct
tttaaggcagcgcatctggagttgttcattcatcccagtaggttcatggtctcgctggcc
tcaggagtgaagctgcagaccttcgcggtgagtattacagctcataaaggcagtgcggac
ccaaagagtgagcagcagcaagatttattgcaaatagtgaaagaacaaagcttccgcagt
gtggaaggggacccgacccttgggcagtcgatgggatcgggcgctgcggaccagggagcg
gcgctcgtcggggaggctcgggccacacaggagcccacggcagtggggggaggctcgggc
atggcaggctgcaggtcccgagccctgccccgtgaggaggaagctgaggcccggcgagaa
ttcgagcacagcacctgcgggccagcactactgggggacccacacaccctccacagctgc
tggcccagggatggacagtgccggaggtcagccaggggttggtgggatggatccagtcaa
actcagctctgctcggtttccaccatgtggctcagcaacaaagcagccatgacacgtgtt
gccaagaccatgtgttgggagccaggagtagatgaattcctggtgtacataaggaaaaca
gcaactgagtttgctacaactgtgattaacatgcaagattcatcctggagatag