GENSCAN 1.0	Date run:  4-Nov-116	Time: 22:55:36

Sequence gi568815593r:14697126_14898400 : 201275 bp : 44.19% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    239    287   49  1  1   86   58    47 0.250   0.62
 1.02 Intr +    374    416   43  0  1   73   76    67 0.297   1.30
 1.03 Intr +   8486   8594  109  2  1   54   74    81 0.236   3.59
 1.04 Intr +  10805  11005  201  1  0   45   95    71 0.777   2.98
 1.05 Term +  11439  11621  183  2  0   63   48   131 0.987   4.14
 1.06 PlyA +  12128  12133    6                              -0.45

 2.19 PlyA -  12532  12527    6                               1.05
 2.18 Term -  14185  14072  114  1  0   53   48   141 0.986   5.17
 2.17 Intr -  15848  15749  100  1  1   92   94   135 0.999  14.61
 2.16 Intr -  16542  16419  124  1  1   82   63   195 0.967  16.04
 2.15 Intr -  19710  19581  130  0  1  120  103   131 0.991  18.07
 2.14 Intr -  20815  20735   81  1  0   88   33    72 0.738   1.53
 2.13 Intr -  21263  21182   82  1  1   82  111     8 0.549   2.14
 2.12 Intr -  24321  24245   77  0  2   75   37   123 0.880   4.21
 2.11 Intr -  30585  30391  195  0  0   92   87    47 0.842   4.61
 2.10 Intr -  36813  36664  150  0  0   28   40   105 0.055   0.06
 2.09 Intr -  44797  44702   96  1  0  115  103   139 0.981  18.31
 2.08 Intr -  48837  48745   93  0  0  130  100    90 0.998  14.56
 2.07 Intr -  52181  52047  135  2  0  100   64    60 0.865   5.56
 2.06 Intr -  54114  53944  171  0  0  141   71   193 0.968  23.04
 2.05 Intr -  58819  58736   84  1  0   88   99     5 0.701   1.62
 2.04 Intr -  60966  60853  114  0  0   40   92    43 0.547   0.54
 2.03 Intr -  61473  61355  119  1  2   49  101    89 0.798   6.48
 2.02 Intr -  72066  71850  217  0  1  106   66   354 0.601  33.08
 2.01 Init -  81074  80916  159  2  0   70   77    88 0.028   5.73
 2.00 Prom -  94396  94357   40                              -1.46

 3.02 PlyA -  95321  95316    6                               1.05
 3.01 Sngl - 101170 100241  930  1  0   56   45   538 0.933  42.74
 3.00 Prom - 103921 103882   40                              -3.76

 4.00 Prom + 111737 111776   40                              -2.46
 4.01 Sngl + 138718 139776 1059  0  0   43   43   379 0.990  26.06
 4.02 PlyA + 139909 139914    6                               1.05

 5.06 PlyA - 141634 141629    6                               1.05
 5.05 Term - 152749 152655   95  2  2   53   42   156 0.441   5.49
 5.04 Intr - 163124 162902  223  2  1  100   37    62 0.109   0.00
 5.03 Intr - 174372 174227  146  1  2  107  115   160 0.512  20.60
 5.02 Intr - 175392 174856  537  1  0   98   11   146 0.082   0.79
 5.01 Init - 180792 180735   58  0  1   54   57    73 0.126   2.27
 5.00 Prom - 197223 197184   40                              -2.86


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  82294  82362   69  0  0  106   42   134 0.880   8.54
S.002 Init +  88314  88425  112  2  1   78   77   115 0.894   9.78
S.003 Sngl - 151529 151323  207  2  0  100   48   163 0.837   7.31


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:14697126_14898400|GENSCAN_predicted_peptide_1|194_aa
MGFYHVGQAGLELLASGYIEIYYQECRNGFCFRQFPDQYIIKQPKYLIKSKEQRICHCKA
CGCGSPGKCKQVAFCAPFKESQTGEFPANVQIRQYSLSHVAGRSNPTVTFQAQASSSSFC
SVVVSLTPFATEIPLDDGTRLEETQENMPVLSFASKLLGCDLSSPSEENVRRRITCFKVK
GLNKSCQISSIVVA

>gi568815593r:14697126_14898400|GENSCAN_predicted_CDS_1|585_bp
atggggttttaccatgttggccaggctggtctcgagctcctggcctcaggttatattgaa
atctactaccaggaatgtcggaatgggttttgctttagacagttccctgatcagtacatc
attaagcaaccaaaatatctcattaaatccaaggagcagcgtatttgccactgcaaggct
tgtggatgtggcagccctgggaaatgcaaacaagtggccttctgtgccccatttaaagaa
tcccaaacgggagagtttcctgccaatgtgcaaatccgtcaatactccctgagccatgtg
gccggcaggtccaatcctaccgtgactttccaagcgcaagcctcgtctagttctttttgc
tcagttgttgtctcactgacgccctttgccactgagatccctctggatgatgggactcga
ttagaagaaacgcaggagaatatgccagttctcagttttgcctcaaagttgttaggctgt
gacttaagcagcccaagtgaagaaaatgtacgaagaaggatcacgtgctttaaggtgaaa
ggtttgaacaagtcctgccaaatcagctccattgtggtggcctga

>gi568815593r:14697126_14898400|GENSCAN_predicted_peptide_2|746_aa
MHSYLQDCEDQDDPRPGAACALTFLLPSSGVARNFSCWVTAAVKGHAVPSQVEALNRGIA
AVKEDAVEMLASYGLAYSLMKFFTGPMSDFKNVGLVFVNSKRDRTKAVLCMVVAGAIAAV
FHTLIAYSDLGYYIINKLHHVDESVGSKTRRAFLYLAAFPFMDAMAESLSSECLGHILCI
RSSADGHLRCFHLWVLVTNAAMNAWTHAGILLKHKYSFLVGCASISDVIAQVVFVAILLH
SHLECREPLLIPILSLYMGALVRCTTLCLGYYKNIHDIIPDRSGPELGGDATIRKMLSFW
WPLALILATQRISRPIVNLFVSRDLGGSSAATEAVAILTATYPVGHMPYGWLTEIRAVYP
AFDKNNPSNKLVSTSNTVTAAHIKKFTFVCMALSLTLKDSVQKPDISLTGRLVQTLPTRM
RHQRGESKDVAPLASWLSEPSTSSEASQTSSKLTINSQGEGKAKQKLECGTLSIVLRSCE
KNQERIKAAEKRNRSWTTLCGLGAWRPLLFELPVIVQTPDQTNRFQFRYPAKTQSGLCSF
FHSFDLLTLEAFVKVWFPGCLLILIEYASSKNRKSKMLQNLKLLSADMTLKLCFVMFWTP
NVSEKILIDIIGVDFAFAELCVVPLRIFSFFPVPVTVRAHLTGWLMTLKKTFVLAPSSVL
RIIVLIASLVVLPYLGVHGATLGVGSLLAGFVGESTMVAIAACYVYRKQKKKMENESATE
GEDSAMTDMPPTEEVTDIVEMREENE

>gi568815593r:14697126_14898400|GENSCAN_predicted_CDS_2|2241_bp
atgcacagctacctccaggactgcgaggatcaggatgaccccaggccgggtgctgcatgt
gccctcaccttcctgttgcccagctctggggttgccaggaatttcagctgctgggtgaca
gcagcagtcaaaggccatgcagtgccatctcaggtggaggccttgaaccggggcattgct
gctgtcaaggaggatgcagtcgagatgctggccagctacgggctggcgtactccctcatg
aagttcttcacgggtcccatgagtgacttcaaaaatgtgggcctggtgtttgtgaacagc
aagagagacaggaccaaagccgtcctgtgtatggtggtggcaggggccatcgctgccgtc
tttcacacactgatagcttatagtgatttaggatactacattatcaataaactgcaccat
gtggacgagtcggtggggagcaagacgagaagggccttcctgtacctcgccgcctttcct
ttcatggacgcaatggctgagtcactttccagtgaatgtctaggccacatcttgtgtatc
cgttcgtcagctgatggacacttgcgttgcttccacctttgggttcttgtgactaacgct
gctatgaacgcatggacccatgctggcattctcttaaaacacaaatacagtttcctggtg
ggatgtgcctcaatctcagatgtcatagctcaggttgtttttgtagccattttgcttcac
agtcacctggaatgccgggagcccctgctcatcccgatcctctccttgtacatgggcgca
cttgtgcgctgcaccaccctgtgcctgggctactacaagaacattcacgacatcatccct
gacagaagtggcccggagctggggggagatgcaacaataagaaagatgctgagcttctgg
tggcctttggctctaattctggccacacagagaatcagtcggcctattgtcaacctcttt
gtttcccgggaccttggtggcagttctgcagccacagaggcagtggcgattttgacagcc
acataccctgtgggtcacatgccatacggctggttgacggaaatccgtgctgtgtatcct
gctttcgacaagaataaccccagcaacaaactggtgagcacgagcaacacagtcacggca
gcccacatcaagaagttcaccttcgtctgcatggctctgtcactcacgcttaaagacagt
gtacagaaaccagacatcagcctgacggggcgcttagtccagacactcccgacacgcatg
cgccatcaacgtggagaaagcaaagatgtggcgcctctggcctcttggctttccgagccc
agcaccagctcggaggcttcccaaacaagttccaagttgactattaatagtcaaggagaa
ggaaaggctaaacagaagctggagtgtggaactttatcaatagtcctcagatcctgtgag
aaaaaccaggaaaggattaaagctgcagagaaaaggaataggagttggacaaccctctgc
gggcttggcgcatggcgccccctgctgtttgagttacctgtgattgttcaaaccccagat
cagactaaccgcttccagttccgataccccgcgaagacccagtctgggctttgtagtttt
ttccatagttttgacctcctcacattggaggcctttgtcaaagtctggtttcctggttgc
ctgctcattttgattgagtatgcctcatccaaaaatcgaaaatccaaaatgctccaaaat
ctgaaacttttgagcgctgacatgactctcaaactctgtttcgtgatgttttggacaccc
aacgtgtctgagaaaatcttgatagacatcatcggagtggactttgcctttgcagaactc
tgtgttgttcctttgcggatcttctccttcttcccagttccagtcacagtgagggcgcat
ctcaccgggtggctgatgacactgaagaaaaccttcgtccttgcccccagctctgtgctg
cggatcatcgtcctcatcgccagcctcgtggtcctaccctacctgggggtgcacggtgcg
accctgggcgtgggctccctcctggcgggctttgtgggagaatccaccatggtcgccatc
gctgcgtgctatgtctaccggaagcagaaaaagaagatggagaatgagtcggccacggag
ggggaagactctgccatgacagacatgcctccgacagaggaggtgacagacatcgtggaa
atgagagaggagaatgaataa

>gi568815593r:14697126_14898400|GENSCAN_predicted_peptide_3|309_aa
MTHALEWPSLTAQWLPDVTRPEGKDFSLHRLVLGTHTSDEQNHLVIASVQLPDDDAQFDA
SHYDREKGEFGGFGSVSGKIEIEIKINHEGKVNRARYMPQNPCIITTKTPSSDILVFDYT
KHPSKPDPSGECNPDLRLRGHQKEGYGLSWNLNLSGHLLSASDDHTICLWDISAVPKEGK
VVDAKTIFTGHTAIVEDVSWHLLCESLFGSVADDQKLMIWDTRSNNTSKPSHSVDTHTAE
VNCLSFSPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILAS
SGTDHRPNV

>gi568815593r:14697126_14898400|GENSCAN_predicted_CDS_3|930_bp
atgacccatgctctggagtggcccagcctaactgcccagtggcttccagatgtaaccaga
ccagaagggaaagatttcagccttcatcgacttgtcctggggacacacacatcggatgaa
caaaaccatcttgttatagccagtgtgcagctgcctgatgatgatgctcagtttgatgca
tcacactacgacagagagaaaggagaatttggaggttttggttcagttagtggaaaaatt
gaaatagaaatcaagatcaaccatgaaggaaaagtaaacagggcccgttatatgccccag
aacccttgtatcatcacaacaaagactccttccagtgatattcttgtctttgactataca
aaacatccttctaaaccagatccttctggagaatgcaacccagacttgcgtctccgtgga
catcagaaggaaggctatgggctttcttggaacctaaatctcagtgggcacttacttagt
gcttcagatgaccacaccatctgcctgtgggacatcagtgccgttccaaaggagggaaaa
gtggtagatgcgaagaccatctttacagggcatacggcaatagtagaagatgtttcctgg
catctactctgtgagtctctgtttgggtcagttgctgatgatcagaaactgatgatttgg
gatactcgttcaaacaatacttccaaaccaagccactcagttgacactcacactgctgaa
gtgaactgcctttctttcagtccttatagtgagttcattcttgccacaggatcagctgac
aagactgttgccttgtgggatctgagaaatctgaaacttaagttgcattcctttgagtca
cataaggatgaaatattccaggttcagtggtcacctcacaatgagactattttagcttcc
agtggtactgatcacagaccgaatgtctag

>gi568815593r:14697126_14898400|GENSCAN_predicted_peptide_4|352_aa
MNINAKILNKILANRIQQHIKKLIHHDQVGFIPGMQGWFNICKSINVIHHINRTKDKNHM
IISIAAEKAFDKIQQPFMLKTLNKLGIDGTYLKIIRAIYDKPTANIILNGQKLEAFPLKT
GTRQGCPLSPLLFNIVLEVLARAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIISA
PNLLKLISNFSKASGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIQLTR
DVKDLFKEDYKPLLNKIKEDTNKWKNIPCSWIGRINIVKMAILPKVIYRFNAIPIKLPMT
FFTELEKTTLKFIWNQKRAHIAKTILSQKNKAGGIMLPDFELYYKATVTKTA

>gi568815593r:14697126_14898400|GENSCAN_predicted_CDS_4|1059_bp
atgaacatcaatgcaaaaatcctcaataaaatactggcaaatcgaatccagcagcacatc
aaaaagcttattcaccacgatcaagttggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacgtaatccatcacataaacagaaccaaagacaaaaaccacatg
attatctccatagctgcagaaaaggcctttgacaaaattcaacagcccttcatgctaaaa
actctcaataaactaggtattgatgggacgtatctcaaaataataagagctatttatgac
aaacccacagccaatatcatactgaatgggcaaaaactggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
gccagagcaatcaggcaggagaaagaaataaagggtattcaattaggaaaagaggaagtg
aaattgtccctgtttgcagatgacatgattgtatatttagaaaaccccatcatctcagcc
ccaaatctgcttaagctgataagcaacttcagcaaagcctcaggatacaaaatcaatgtg
caaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatcatgagt
gaactcccattcacaattgcttcaaagagaatcaaatacctaggaatccaacttacaagg
gatgtgaaggacctcttcaaggaggactacaaaccactgctcaacaaaataaaagaggac
acaaacaaatggaagaacattccatgctcatggataggaagaatcaatattgtgaaaatg
gccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatgact
ttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcccac
attgccaagacaatcctaagccaaaagaacaaagctggaggcatcatgctacctgacttc
gaactatactacaaggctacagtaaccaaaacagcatga

>gi568815593r:14697126_14898400|GENSCAN_predicted_peptide_5|352_aa
METEQPEETFPNIEINSDSGTRATVAPGNPGGQAPSWATFPRFFRPPRSGTSIPPGPLVP
RSRPQPRRKLPPPQSPPAASPATAGRRPSQPRAPLPSPPRASEPTSLAPAAKSSRRPGPP
GTAREPRPPAPRDEGYRARPASQGTPGSPGGPPPSPPTGVPKPPDRPRRALSAAAPGPAE
APRRVPPSAPEAPAPRPEQSPRGSRCVWGQPTAGTMVKFPALTHYWPLIRFLVPLGITNI
AIDFGEQVSVFECPSLTAFWRETLFLWDGFGCSLASPEKTPGLEPGVQLVVPHLYPHAEA
FHHLRLMPIGLSPKRGQISWHSLKVHMEDHLLLRMHIRVTVTSSVCLDDNVT

>gi568815593r:14697126_14898400|GENSCAN_predicted_CDS_5|1059_bp
atggaaactgaacagccagaggaaaccttccctaacatcgaaatcaacagtgactctggg
acacgggccaccgttgcccctggaaaccctgggggacaggctccctcctgggcgaccttt
ccacgtttctttcgccccccccggagcggcacctccatacctcccgggccgctagtcccc
cgaagcaggccccagccccggcgcaagctgcctcctccgcagtccccgcccgccgccagc
ccggccaccgccggacggcgcccttcccagccccgcgccccgctccccagccctcctcgc
gcgtccgagcccacgtcgcttgccccggctgccaagtcttccagacggccgggccctccc
ggcacagcgcgggaaccccggcccccggccccacgggacgagggctacagggcccggccg
gcgagccagggcaccccggggtctccaggcggcccaccgccctcaccccccaccggcgtc
cccaagcccccagaccgtccccgccgcgccctcagcgccgccgcccccgggccggccgag
gctccgcggcgagtcccgcccagcgccccggaggcgccagccccacggcccgagcagtcc
cctcgcggcagcagatgtgtgtggggtcagcccacggcggggactatggtgaaattcccg
gcgctcacgcactactggcccctgatccggttcttggtgcccctgggcatcaccaacata
gccatcgacttcggggagcaggtttctgtgttcgaatgtccctccctcaccgccttctgg
agagagaccttgtttctttgggatggttttggatgcagccttgcatcacctgagaagaca
cctggcctggagcctggcgtgcagctggttgtacctcatttgtacccccacgcagaggca
ttccaccacctgcggctcatgcctattgggctgtctcctaaacgtgggcagatttcctgg
cattccctgaaagtccacatggaagaccaccttcttttgaggatgcacatccgagtgacc
gtgacaagcagcgtctgcctggatgacaatgtgacttaa