GENSCAN 1.0	Date run:  8-Nov-116	Time: 16:43:47

Sequence gi568815593r:115516212_115725792 : 209581 bp : 38.26% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.03 PlyA -     38     33    6                               1.05
 1.02 Term -   9406   8097 1310  2  2  109   44   845 0.658  72.95
 1.01 Init -  27282  26739  544  0  1   41  113   495 0.991  42.40
 1.00 Prom -  28982  28943   40                              -6.85

 2.00 Prom +  29107  29146   40                              -5.85
 2.01 Init +  29163  29316  154  2  1   91   48    33 0.090  -0.16
 2.02 Intr +  33040  33176  137  2  2   18  111    70 0.089   1.67
 2.03 Intr +  36077  36148   72  1  0  109   38    49 0.076   0.68
 2.04 Intr +  48542  48917  376  1  1  -56   32   329 0.364   6.56
 2.05 Term +  49308  49498  191  1  2   44   50   124 0.527   0.83
 2.06 PlyA +  49956  49961    6                               1.05

 3.08 PlyA -  50520  50515    6                               1.05
 3.07 Term -  64986  64338  649  2  1   42   50   531 0.532  37.26
 3.06 Intr -  70780  70674  107  1  2   42   73    78 0.172  -0.21
 3.05 Intr -  72147  71976  172  2  1   56   62   111 0.215   4.32
 3.04 Intr -  86226  86108  119  0  2   97   72    91 0.018   6.74
 3.03 Intr - 100234 100061  174  1  0   70   68   175 0.615  12.91
 3.02 Intr - 104469 104224  246  0  0  118   99   200 0.998  20.83
 3.01 Init - 109581 109390  192  0  0   71   69   287 0.984  22.11
 3.00 Prom - 111586 111547   40                              -6.55

 4.00 Prom + 120303 120342   40                              -3.55
 4.01 Init + 121687 121740   54  0  0   60   96    14 0.123   0.74
 4.02 Intr + 130365 130457   93  2  0   56   78    67 0.217   1.74
 4.03 Intr + 135960 136148  189  2  0  108   33    74 0.177   2.76
 4.04 Intr + 136818 137011  194  2  2   19   10   184 0.640   1.07
 4.05 Intr + 137165 137446  282  2  0   79   92   119 0.586   7.01
 4.06 Term + 141305 141479  175  2  1   45   38   157 0.597   2.65
 4.07 PlyA + 142107 142112    6                               1.05

 5.00 Prom + 148443 148482   40                              -6.65
 5.01 Sngl + 159341 159817  477  1  0   88   38   401 0.959  30.94
 5.02 PlyA + 160019 160024    6                              -0.45

 6.00 Prom + 160191 160230   40                              -8.25
 6.01 Init + 161646 161896  251  2  2   59   72   180 0.107  10.48
 6.02 Intr + 162478 163110  633  1  0    2   39   294 0.004   6.22
 6.03 Intr + 168715 168892  178  1  1   72   80    69 0.053   3.50
 6.04 Term + 170305 170460  156  0  0   37   33   128 0.314  -0.85
 6.05 PlyA + 170666 170671    6                               1.05

 7.06 PlyA - 170864 170859    6                               1.05
 7.05 Term - 184577 184449  129  2  0   90   47    83 0.193   1.60
 7.04 Intr - 195887 195682  206  0  2   64   27   116 0.329   1.10
 7.03 Intr - 196462 196353  110  0  2  -25   57   123 0.042  -3.09
 7.02 Intr - 201118 200990  129  0  0   53  100   129 0.584   9.49
 7.01 Intr - 201698 201491  208  0  1   55   83   143 0.903   7.71

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_1|617_aa
MDLKTAVFNAARDGKLRLLTKLLASKSKEEVSSLISEKTNGATPLLMAARYGHLDMVEFL
LEQCSASIEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLNHGASVNNTTLTNSTPL
RAACFDGHLEIVKYLVEHKADLEVSNRHGHTCLMISCYKGHKEIAQYLLEKGADVNRKSV
KGNTALHDCAESGSLDIMKMLLMYCAKMEKDGYGMTPLLSASVTGHTNIVDFLTHHAQTS
KTERINALELLGATFVDKKRDLLGALKYWKKAMNMRYSDRTNIISKPVPQTLIMAYDYAK
EVNSAEELEGLIADPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFKRCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTTVTFDDLMGILCKSVL
EIERAIKQTQCPADPLQLNKALSIILHLICLLEKVPCTLEQDHFKKQTIYRFLKLHPRGK
NNFSPLHLAVDKNTTCVGRYPVCKFPSLQVTAILIECGADVNVRDSDDNSPLHIAALNNH
PDIMNLLIKSGAHFDATNLHKQTASDLLDEKEIAKNLIQPINHTTLQCLAARVIVNHRIY
YKGHIPEKLETFVSLHR

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_1|1854_bp
atggatctaaagacagcagtatttaacgcagctcgggatggcaaactccggcttctcacc
aaattgttggcaagcaaatccaaagaggaggtttcctccttgatctctgaaaaaacaaat
ggggccacgccactcttgatggccgccaggtatgggcaccttgacatggtggaattcctc
ctagagcaatgcagtgcctccatagaagttgggggctccgtcaattttgatggcgaaacc
attgagggggctccccctttatgggccgcttctgcagcaggacatctgaaggtggtccag
tccttgttaaatcatggagcatctgtcaacaacacgactttaaccaattcaactcctctt
cgagctgcgtgtttcgatggccatttggaaatagtgaagtaccttgtagaacacaaagct
gatttggaagtgtcaaaccgacatgggcatacgtgcttgatgatttcatgttacaaagga
cataaagagattgctcagtatttacttgaaaagggggcagatgttaatagaaaaagtgtc
aaaggtaatactgcattgcatgattgtgcagaatctggaagtttggacatcatgaagatg
cttcttatgtattgtgccaagatggaaaaggatggttatggaatgactccccttctctca
gcaagtgtgactggtcacacaaatattgtggattttctgacacaccatgcacagaccagc
aagacagaacgtattaatgctctagagcttctgggagctacatttgtagacaaaaaaaga
gatctgcttggggctttgaaatactggaaaaaggcaatgaacatgaggtacagtgatagg
actaatattattagtaaaccagtgccacagacactaataatggcttatgattatgccaag
gaagtgaacagtgcagaagagctagaaggtcttattgctgatcctgatgagatgagaatg
caggcactattaatcagagaacgtattcttggtccttctcatcctgatacctcttactat
attagatatagaggcgctgtctatgcagactctggaaatttcaaacgatgcatcaaccta
tggaagtatgctttggatatgcagcagagcaatttggatcctttaagcccaatgaccgcc
agcagcttattatcttttgcagaactattctcctttatgctacaggatagggctaaaggc
ctgctgggtactactgttacatttgatgatcttatgggcatactttgcaaaagcgtcctt
gaaatagagcgagctatcaaacaaactcagtgtccagctgacccattacagttaaataag
gccctttctattattttgcacttaatttgcttgttagagaaagttccttgtactctagaa
caagaccatttcaaaaagcagactatatacaggtttcttaagctgcatccaaggggaaag
aataacttcagccctcttcatctggctgtggacaagaatactacatgtgtagggcggtac
cctgtttgtaaatttccatctctacaagttactgcaatactgatagaatgtggtgctgat
gtgaacgtcagagactcggatgacaacagtcccctgcatatcgctgctcttaacaaccat
ccagacatcatgaatctccttattaaatcaggtgcacattttgatgccacaaacttgcac
aaacaaactgctagtgacttgctggatgagaaggaaatagctaaaaatttaatccagcct
ataaatcataccacattgcagtgtcttgctgctcgtgtcatagtgaatcatagaatatat
tataaagggcatatcccagaaaagctagagacttttgtttcccttcatagatga

>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_2|309_aa
MGETAFLIQLSPTRSLPQYVGIMGAKIQIWVRTSITLTHVKSLGLVFRPYFAITVFLKAT
ECYWGITGRLIFKGSVGGAKDWKRGKGPETASELPIQVLPTQAQGVPLLPFSEEASASER
KIPENVEVTLELGNRQRLEEFGGLRRRQEDEGSLELPRDWLNGCDQNADSDMDSEIQAYQ
VSDGNEELIGNWSKGYSYALAKNLAILCPCPRDLWKFELENNNLGYLAEEISKKQSIQDA
HGCFKQPLAQRTPDIVHAAASEGARCKPWQLPCGVKPVGTQNARVKAWQLLPRFQRMYEK
AWCLGRSRL

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_2|930_bp
atgggggaaacagccttcttgattcaattatctcccactaggtccctcccacaatatgtg
ggaatcatgggagctaaaattcaaatttgggtgcggaccagtattaccctcacacacgtg
aagtctctcggactagtcttccgtccttactttgcaattactgtcttcctgaaagccaca
gaatgctactggggcataacaggaagactcatttttaaggggtctgtagggggagccaaa
gactggaaaaggggaaagggaccagagacagcctctgaattacccattcaggtccttcct
acacaggcacagggtgttccactgctgccattctctgaagaggccagtgcctcagaaaga
aagatacctgaaaatgtggaagtgactttggaactgggtaacaggcagaggttggaagag
tttggagggcttagaagaagacaggaagatgaaggaagtttggaacttcctagagactgg
ttaaatggttgtgaccaaaatgctgatagtgatatggacagtgaaatccaggcttatcag
gtctcagatggaaatgaggaacttattgggaactggagcaaaggttactcttatgcctta
gcaaagaacttggctatattgtgtccatgtcctagggatctgtggaaatttgaacttgag
aacaataacctagggtatctggcagaagaaatttctaagaagcaaagtattcaagatgct
catggctgcttcaaacaacccttggctcaaaggaccccagatatagttcatgctgctgct
tcagagggtgcacgatgtaagccttggcagcttccatgtggtgttaagcctgtgggtaca
cagaatgcaagagtgaaggcttggcagcttctgcctagatttcagaggatgtatgaaaaa
gcctggtgtctaggcagaagccggctgtag

>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_3|552_aa
MPRPGSAQRWAAVAGRWGCRLLALLLLVPGPGGASEITFELPDNAKQCFYEDIAQGTKCT
LEFQVITGGHYDVDCRLEDPDGKVLYKEMKKQYDSFTFTASKNGTYKFCFSNEFSTFTHK
TVYFDFQVGEDPPLFPSENRVSALTQMESACVSIHEALKSVIDYQTHFRLREAQGRSRAE
DLNTRVAYWSVGEALILLVVSIGQRHVPGGACHGKAAVRPRAAPRGRRGGRQQQSGLTSG
DLQGHYPVTQHTQELSGLFLFRKGVVVERQSLPSAQEDKTLILRRFHTYISPSLLANSLQ
FKMSTCLCLARVKRPVLQMALLSAFMAPDILNKAPVQHSVDTSPGYHESDSKKSEDLSLC
NVAEHSNTTEGPTGKQEGAQSVEEMFEEEAEEEVFLKFVILHAEDDTDEALRVQNLLQDD
FGIKPGIIFAEMPCGRQHLQNLDDAVNGSAWTILLLTENFLRDTWCNFQFYTSLMNSVNR
QHKYNSVIPMRPLNNPLPRERTPFALQTINALEEESRGFPTQVERIFQESVYKTQQTIWK
ETRNMVQRQFIA

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_3|1659_bp
atgccgcggccggggtccgcgcagcgctgggcggccgtcgcgggccgttgggggtgcagg
ctgctcgcactgctgctactggtgcctggacccggcggcgcctctgagatcaccttcgag
cttcctgacaacgccaagcagtgcttctacgaggacatcgctcagggcaccaagtgcacc
ctggagttccaggtgattactggtggtcactatgatgtagattgtcgattagaagatcct
gatggtaaagtgttatacaaagagatgaagaaacagtatgatagttttaccttcacagcc
tccaaaaatgggacatacaaattttgcttcagcaatgaattttctactttcacacataaa
actgtatattttgattttcaagttggagaagacccacctttgtttcctagtgagaaccga
gtcagtgctcttacccagatggaatctgcctgtgtttcaattcacgaagctctgaagtct
gtcatcgattatcagactcatttccgtttaagagaagctcaaggccgaagccgagcagag
gatctaaatacaagagtggcctattggtcagtaggagaagccctcattcttctggtggtt
agcatagggcagcgccacgtcccgggtggggcctgccacggcaaagcagcagtccggcct
cgagcggcccctcgggggcggcggggtgggcgccaacagcagtcaggcctgacaagcggc
gacctccaaggacattatcctgtgacccagcacactcaagagttaagtggcctattcctc
ttcagaaaaggagtggtggtggagagacagagcttacccagtgcccaagaggataagacc
ttaattctaagacgcttccacacgtatatttcaccctctttactagcaaattcccttcag
ttcaaaatgtccacctgtctttgtcttgcaagggtgaagcgtcccgtgctgcagatggcc
ctcctgagtgctttcatggcacctgatattctgaataaagcacctgtgcagcacagtgtg
gatacaagtccaggatatcatgagtcagattccaagaagtctgaagatctatccttgtgt
aatgttgctgagcacagcaatacaacagaggggccaacaggaaagcaggagggagctcag
agcgtggaagagatgtttgaagaagaagctgaagaagaggtgttcctcaaatttgtgata
ttgcatgcagaagatgacacagatgaagccctcagagtccagaatctgctacaagatgac
tttggtatcaaacccggaataatctttgctgagatgccatgtggcagacagcatttacag
aatttagatgatgctgtaaatgggtctgcatggacaatcttattactgactgaaaacttt
ttaagagatacttggtgtaatttccagttctatacgtccctaatgaactccgttaacagg
cagcataaatacaactctgttatacccatgcggcccctgaacaatccccttccccgagaa
aggactccctttgccctccaaaccatcaatgccttagaggaagaaagtcgtggatttcct
acacaagtagaaagaatttttcaggagtctgtgtataagacacaacaaactatatggaaa
gagacaagaaatatggtacaaagacaatttattgcctga

>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_4|328_aa
MAREKGEASELCCDSSERENEQIDQQKLGFHRVQHTKGGGQHGSPREKEAAPHQAEPGPN
SSSASAPPLYNPPIISPPHTRSGLQFRSTTSPPSPAQQFPLEEVARAKGIVKAPRTITDA
ELCATLTVEGKAVLFLINMEATNSTLPSFQGPVSLASITVVGIDGQASKPLKTPQLCSKS
PSHPHLVSPHLNPQVWDTSTPSLATDHVPLTIPLKPNHPYPAQRQYPIPQQALRGLKPDI
TCLLQYGLLKPINSPYNSHILPVQKPDESYRKQSKILKILDWIVQYLKSTGGMGYGQSLT
YSSITVTQTVTGDDTGGQGFGKSSSGKT

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_4|987_bp
atggcacgagaaaaaggagaggcttctgaactctgttgtgatagtagtgagagggaaaat
gaacagattgatcagcagaaattgggtttccatcgggtccaacacaccaagggagggggc
caacatgggagcccacgagagaaggaggctgctcctcaccaggccgagccaggtcccaat
tcttcctcagcctctgctcccccactgtataatcctcctatcatctcccctcctcacacc
cggtctggcttacagtttcgttccacgactagccctccctcacctgcccaacagtttcct
cttgaagaggtggctagagctaaaggcatagtcaaggccccccggacaatcactgatgcc
gagctttgcgcaactcttacagtggagggtaaggccgtcctcttcttaattaatatggag
gctaccaactccacattaccttcttttcaagggcctgtttcccttgcctccataactgtt
gtgggtattgacggccaggcttctaaacctcttaaaactccccaactctgttcgaagtct
ccttcacatcctcaccttgtatctccccaccttaatccacaagtatgggatacctctact
ccctctttggcaaccgatcatgtgccccttaccatcccattaaaacctaatcacccttac
ccagctcaacgccaatatcccatcccacaacaggctttaagaggattaaagcctgatatc
acttgcctgctacagtatggccttttaaagcctataaattctccttacaattctcacatt
ttacctgtccaaaaaccggacgagtcttacagaaaacaaagtaaaatccttaaaatcctg
gactggattgtgcaatatttgaagagtacagggggaatggggtatggacaatccttgaca
tatagtagtatcacagttactcaaactgtcactggtgatgacacaggaggtcaaggtttt
gggaaatcaagtagcggtaaaacttga

>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_5|158_aa
MGKKQSRKTGNSKKQSTSPPPKDHSSSAAMEQSWTENDFDELREEGFSRSNYEIQEEIQT
QGKEVKNFEKNLDECITRITNTEKCLKELMELKAKARELCEECRRLRSRRDQLEERVSAM
EDEMNEMKREGKFREKRIKRNKQSLQEIWDYVKDQIYV

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_5|477_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagcacctctcctcct
ccaaaggatcacagttcctcagcagcaatggaacaaagctggacagagaatgactttgat
gagttgagagaagaaggcttcagccgatcaaactacgagatacaggaggaaattcaaacc
caaggcaaagaagttaaaaactttgaaaaaaatttagatgaatgtataactagaataacc
aatacagagaagtgcttaaaggagctgatggagctgaaagccaaggcacgagaactatgt
gaagaatgcagaaggctcaggagccgacgtgatcaactggaagaaagggtatcagcgatg
gaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaagaga
aacaaacaaagcctccaagaaatatgggactatgtgaaagaccaaatctacgtctga

>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_6|405_aa
MTTDPTEIQTTIREYYKHLYANKLENLEEMDKFLDTYTLPRLNQEEVESLNRPITGSEIV
SIIISLPTKKSPGPDGFTAGFYQRAIRQEKEIKGIQLGKEEVKLSLFADDMIVYLENPIV
SAQNLLKLISNFSKVSGYKINVQKSQAFLYTNNRQTESQIMSELPFTIASKRIKYLGIHL
TRDVKDHFKENYKPLLNEIKEDKNKWKNIPCSWAGRINIVKMAILPKVIYRVNAIPIKLP
MTFFTELEKTTLKFLWNQKIACITKSILSQKNKAGGITLPDFKLYYKATVTKTAWVQLLH
CLPPLRLGHLRIPGTFCHNVIAKVWGMALSAFYLPGLFQLLIHYGNSNCFVPTQNLGEVP
KSSGLEVPTTLGWRLTRSGKAFAARRLLPLLPTSRYSPSLTPVNH

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_6|1218_bp
atgaccaccgatcccacagaaatacaaactaccatcagagaatactacaaacacctctac
gcaaataaactagaaaatctagaagaaatggataaattcctcgacacatacactctccca
agactaaaccaggaagaagttgaatctctgaatagaccaataacaggatctgaaattgtg
tcaataatcattagcttaccaaccaaaaagagtccaggaccagatggattcacagccgga
ttctaccagagggcaattaggcaggagaaggaaataaagggtattcaattaggaaaagag
gaagtcaaattatccctgtttgcagacgacatgattgtatacctagaaaaccccattgtc
tcagcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatc
aatgtacaaaaatcacaagcattcttatacaccaataacagacaaacagagagccaaatc
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccacctt
acaagggacgtgaaggaccacttcaaggagaactacaaaccactgctcaatgaaattaaa
gaggataaaaacaaatggaagaacattccatgctcatgggcaggaagaatcaatatcgtg
aaaatggccatactgcccaaggtaatttatagagtcaatgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaactactttaaagttcttatggaaccaaaaaata
gcctgcatcaccaagtcaatcctaagccaaaagaacaaagctggaggcatcaccctacct
gacttcaaactatactataaggctacagtaaccaaaacagcatgggtccagctgctccac
tgcctgccacctctgagactggggcatctcaggatccctggcaccttttgccacaatgtc
attgcaaaggtttggggtatggctctttctgccttctatcttccaggactttttcagctt
ctgattcactacggcaactctaactgttttgttccaacacagaaccttggcgaggttcca
aagtcttcagggttggaggttccaacaactctgggctggaggttgactaggtccgggaaa
gcttttgcagcccgaagacttctgcctctcttacctacttctcggtattctccatcccta
acccctgtcaaccactaa

>gi568815593r:115516212_115725792|GENSCAN_predicted_peptide_7|260_aa
XLPKFLYEKQSQPEPPGSGVPSHPERRLGPLEKVPSQKVFFLLPYRLDQFSKQFLCQRHY
VAENGRASWDVDRTCDLPLAMECGRGDRMLLQCDYVPLAGRLILGTLWQTLKKDLLNGFD
QNADNDIVNDIQAEVVSDGGEELVGNWSKAAPAMAKRGQGTAQVVASEGAGPNPWQLPHG
VEPAVAQKLRTEVWKPPPRFQRMYGNICMFRHMFAVGVNIIPTVWRNGPEVALCWNVTAS
LTWGPVLMAQHPTALGGPIL

>gi568815593r:115516212_115725792|GENSCAN_predicted_CDS_7|783_bp
naacttccaaaatttctctatgaaaagcagagccaaccagaaccacctggaagtggggtg
cccagccatcctgagagaagacttggtccactagagaaagtgccctcacagaaagtcttc
ttcctcctcccttatcgcctggaccaattttctaaacaatttctttgccagcgacattat
gttgcagaaaatggacgagctagctgggatgtggacaggacttgtgacttacctctagca
atggaatgtggcagaggtgatagaatgttacttcagtgtgattatgtccctcttgctggc
agacttattctaggaactctgtggcagaccttaaagaaagatttgttgaatggctttgac
caaaatgctgataatgatattgtcaatgacatccaggctgaggtggtctcagatggaggt
gaggaacttgttggcaactggagtaaagctgctccagccatggctaaaaggggccaaggt
acagctcaggttgtggcttcagagggtgcaggtcccaacccttggcagcttccacatggt
gttgagcctgcagttgcacagaagttgagaactgaggtttggaaacctccacctagattt
cagaggatgtatggaaacatctgtatgttcaggcacatgtttgctgtgggggtgaatatc
atccccacagtttggagaaatggccctgaagtagctctctgctggaatgtcacagcttca
ctgacctggggtcctgtgctcatggctcagcaccccacagctcttggtggccccattctt
tga