GENSCAN 1.0	Date run:  7-Nov-116	Time: 01:22:17

Sequence gi568815593f:69089635_69309796 : 220162 bp : 42.29% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4622   4704   83  1  2   86   99   150 0.806  16.41
 1.02 Intr +   4846   4974  129  1  0   95   57    44 0.196   0.89
 1.03 Intr +  18715  18802   88  1  1   88   70    64 0.818   3.65
 1.04 Intr +  25603  25773  171  0  0   80   94    96 0.982   8.62
 1.05 Intr +  26292  26555  264  2  0   95   67   127 0.926   8.09
 1.06 Intr +  27605  27762  158  1  2   57   69    97 0.684   2.59
 1.07 Intr +  28865  28994  130  2  1   95   98     5 0.680   1.98
 1.08 Intr +  32060  32261  202  1  1   61   84    51 0.672  -0.06
 1.09 Intr +  33565  33791  227  2  2   94   79   123 0.972   8.78
 1.10 Intr +  38370  38498  129  2  0  100   89    65 0.976   7.77
 1.11 Intr +  39813  39979  167  2  2   73   47   100 0.034   2.24
 1.12 Intr +  62507  62633  127  2  1   56   64    61 0.011   0.26
 1.13 Intr +  77277  77554  278  2  2   71   28   156 0.080   3.29
 1.14 Intr +  77559  77649   91  0  1   47   84   110 0.941   5.58
 1.15 Intr +  78274  78444  171  0  0   86   88   189 0.993  17.92
 1.16 Intr +  78539  78709  171  1  0  103   25   172 0.998  11.62
 1.17 Intr +  81636  81818  183  2  0   73  107   181 0.896  17.56
 1.18 Intr +  84617  84775  159  1  0   73   99   105 0.932   9.36
 1.19 Intr +  85243  85479  237  0  0   69   77   156 0.930   9.49
 1.20 Intr +  85763  85903  141  1  0   36   94    97 0.810   4.73
 1.21 Intr +  87605  87715  111  1  0   42  101    66 0.871   2.96
 1.22 Intr +  87890  87991  102  1  0  127   39    66 0.932   5.05
 1.23 Intr +  91983  92067   85  2  1   47  101   104 0.954   6.07
 1.24 Intr +  92178  92308  131  1  2   49  117    77 0.549   6.19
 1.25 Intr +  99791  99875   85  1  1   28   35   113 0.182  -1.53
 1.26 Intr +  99933 100134  202  1  1   59    7   265 0.534  12.92
 1.27 Intr + 102161 102216   56  2  2  136  108    36 0.770   8.10
 1.28 Intr + 118562 118725  164  0  2   59   92   105 0.949   6.77
 1.29 Term + 120073 120165   93  0  0  111   38    81 0.981   2.25
 1.30 PlyA + 120704 120709    6                               1.05

 2.03 PlyA - 120853 120848    6                               1.05
 2.02 Term - 128768 128234  535  1  1   61   47   495 0.553  35.43
 2.01 Init - 131369 131251  119  2  2   68   74    68 0.869   3.12
 2.00 Prom - 138779 138740   40                              -7.45

 3.00 Prom + 139872 139911   40                              -6.45
 3.01 Init + 145342 145570  229  0  1   53   20   163 0.002   4.58
 3.02 Intr + 161111 161247  137  0  2   92   47   108 0.599   6.47
 3.03 Intr + 165826 165894   69  0  0   68   94    35 0.346   0.56
 3.04 Intr + 168409 168519  111  0  0   89   86    19 0.675   1.46
 3.05 Intr + 170184 170302  119  2  2   40  110    69 0.928   2.64
 3.06 Intr + 172571 172670  100  2  1  114  110   128 0.999  16.79
 3.07 Intr + 174067 174387  321  0  0   53   70   134 0.571   3.23
 3.08 Intr + 179573 179659   87  1  0  100  119    43 0.783   7.85
 3.09 Intr + 183258 183407  150  2  0   67   68    58 0.621   1.14
 3.10 Intr + 186909 187056  148  2  1   61  116   111 0.930  10.09
 3.11 Intr + 189992 190154  163  0  1   69   66   155 0.387   9.51
 3.12 Intr + 195895 195991   97  1  1   49   94    11 0.078  -3.11
 3.13 Intr + 199176 199275  100  2  1   81  103    57 0.241   5.26
 3.14 Intr + 208929 209072  144  1  0   68   94    70 0.245   4.93
 3.15 Term + 219304 219869  566  2  2   44   43   175 0.003   2.17

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  39813  39983  171  2  0   73   50   118 0.952   3.34
S.002 Init +  76283  76361   79  1  1   53   86    39 0.843   1.47
S.003 Intr +  77245  77554  310  2  1   66   28   175 0.827   3.75


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:69089635_69309796|GENSCAN_predicted_peptide_1|1444_aa
MEEKYGGDVLAGPGGGGGLGPVDVPSARLPPGSPGSSGACCRRKALKPKSFCLNFWVTRQ
TVSLRTARQFTTLLLFEHSDIVVISLLSVLFTSSGGGPAKGGVLLLVLALCCKVGFHTAS
RKLSVDVGGAKRLQALSHLVSVLLLCPWVIVLSVTTESKVESWFSLIMPFATVIFFVMIL
DFYVDSICSVKMEVSKCARYGSFPIFISALLFGNFWTHPITDQLRAMNKAAHQESTEHVL
SGGVVLFTFVELFYGVLTNSLGLISDGFHMLFDCSALVMGLFAALMSRWKATRIFSYGYG
RIEILSGFINGLFLIVIAFFVFMESVARLIDPPELDTHMLTPVSVGGLIVNLIGICAFSH
AHSHAHGASQGSCHSSDHSHSHHMHGHSDHGHGHSHGSAGGGMNANMRGVFLHVLADTLG
SIGVIVSTVLIEQFGWFIADPLCSLFIAILIFLSVVPLIKDACQVLLLRLPPEYEKELHI
ALEKIQKIEGLISYRDPHFWRHSASIVAGTIHIQVTSDVLEQRIVQQVTGILKDAGVNNL
TIQVEKEAYFQHMSGLSTGFHDVLAMTKQMESMKYCKDGTYIITFSVGLIHSPETILLLH
LEGYKSSCQPFGDWVGEGDWRSYHLVAAAAARERRRRGRPRESLARPSGLASLWPRPSRT
PSRDRPGNAFSATGSRQWEGSECHEQANKEGAVRGLNLRLGWLFSACCGGTAVGFCWVSL
AGRASGVLLLPAELLPGEEEAMALRVTRNSKINAENKAKINMAGAKRVPTAPAATSKPGL
RPRTALGDIGNKVSEQLQAKMPMKKEAKPSATGKVIDKKLPKPLEKVPMLVPVPVSEPVP
EPEPEPEPEPVKEEKLSPEPILVDTASPSPMETSGCAPAEEDLCQAFSDVILAVNDVDAE
DGADPNLCSEYVKDIYAYLRQLEEEQAVRPKYLLGREVTGNMRAILIDWLVQVQMKFRLL
QETMYMTVSIIDRFMQNNCVPKKMLQLVGVTAMFIASKYEEMYPPEIGDFAFVTDNTYTK
HQIRQMEMKILRALNFGLGRPLPLHFLRRASKIGEVDVEQHTLAKYLMELTMLDYDMVHF
PPSQIAAGAFCLALKILDNGEWTPTLQHYLSYTEESLLPVMQHLAKNVVMVNQGLTKHMT
VKNKYATSKHAKISTLPQLNSALVQDLAKAVAKRFPIVSEICSFRWVLGLVDFKNEATDP
RGVKPQTFDLCSECYSVTAHKDSTVLFSRWVHGLAGFRSEAADLPPSAVIFTSRARMKEE
PVVTTATEKQGGKVAGKATFSERVCLLSGSLSPQPAMEEQPQMQDADEPADSGGEGRAGG
PPQVAGAQAACSEDRMTLLLRLRAQTKQQLLEYKSMVDAKLKQASESKLLEIQTEKNKQK
IDLDSMENSERIKIIRQNLQMEIKITTVIQHVFQNLILGSKVNWAEDPALKEIVLQLEKN
VDMM

>gi568815593f:69089635_69309796|GENSCAN_predicted_CDS_1|4335_bp
atggaggagaaatacggcggggacgtgctggccggccccggcggcggcggcggccttggg
ccggtggacgtacccagcgctcggctgcctccgggctccccgggctcttcgggtgcctgc
tgcagaaggaaggcgctaaagccaaaaagcttctgcttgaatttctgggttacaaggcag
acagtcagtcttagaactgcccgccagttcacgactttgctgctatttgagcacagtgat
attgttgtcatttcactactcagtgttttgttcaccagttctggaggaggaccagcaaag
ggtggagtattattgctagtactggctttgtgttgtaaagttggttttcatacagcttcc
agaaagctctctgtcgacgttggtggagctaaacgtcttcaagctttatctcatcttgtt
tctgtgcttctcttgtgcccatgggtcattgttctttctgtgacaactgagagtaaagtg
gagtcttggttttctctcattatgccttttgcaacggttatcttttttgtcatgatcctg
gatttctacgtggattccatttgttcagtcaaaatggaagtttccaaatgtgctcgttat
ggatcctttcccatttttattagtgctctcctttttggaaatttttggacacatccaata
acagaccagcttcgggctatgaacaaagcagcacaccaggagagcactgaacacgtcctg
tctggaggagtggtactttttacctttgtggaattattctatggcgtgctgaccaatagt
ctgggcctgatctcggatggattccacatgctttttgactgctctgctttagtcatggga
ctttttgctgccctgatgagtaggtggaaagccactcggattttctcctatgggtacggc
cgaatagaaattctgtctggatttattaatggactttttctaatagtaatagcgtttttt
gtgtttatggagtcagtggctagattgattgatcctccagaattagacactcacatgtta
acaccagtctcagttggagggctgatagtaaaccttattggtatctgtgcctttagccat
gcccatagccatgcccatggagcttctcaaggaagctgtcactcatctgatcacagccat
tcacaccatatgcatggacacagtgaccatgggcatggtcacagccacggatctgcgggt
ggaggcatgaatgctaacatgaggggtgtatttctacatgttttggcagatacacttggc
agcattggtgtgatcgtatccacagttcttatagagcagtttggatggttcatcgctgac
ccactctgttctctttttattgctatattaatatttctcagtgttgttccactgattaaa
gatgcctgccaggttctactcctgagattgccaccagaatatgaaaaagaactacatatt
gctttagaaaagatacagaaaattgaaggattaatatcataccgagaccctcatttttgg
cgtcattctgctagtattgtggcaggaacaattcatatacaggtgacatctgatgtgcta
gaacaaagaatagtacagcaggttacaggaatacttaaagatgctggagtaaacaattta
acaattcaagtggaaaaggaggcatactttcaacatatgtctggcctaagtactggattt
catgatgttctggctatgacaaaacaaatggaatccatgaaatactgcaaagatggtact
tacatcataactttttctgttgggctgatccattccccagaaaccattctcttacttcac
ttagaagggtataagtccagctgccagccttttggggactgggtaggagaaggcgactgg
aggtcttaccatttggtggccgctgcagctgcccgagagcgcaggcgcagaggcagacca
cgtgagagcctggccaggccttccggcctagcctcactgtggccccgcccctctcgaacg
ccttcgcgcgatcgccctggaaacgcattctctgcgaccggcagccgccaatgggaaggg
agtgagtgccacgaacaggccaataaggagggagcagtgcggggtttaaatctgaggcta
ggctggctcttctcggcgtgctgcggcggaacggctgttggtttctgctgggtgtccttg
gctggtcgggcctccggtgttctgcttctccccgctgagctgctgcctggtgaagaggaa
gccatggcgctccgagtcaccaggaactcgaaaattaatgctgaaaataaggcgaagatc
aacatggcaggcgcaaagcgcgttcctacggcccctgctgcaacctccaagcccggactg
aggccaagaacagctcttggggacattggtaacaaagtcagtgaacaactgcaggccaaa
atgcctatgaagaaggaagcaaaaccttcagctactggaaaagtcattgataaaaaacta
ccaaaacctcttgaaaaggtacctatgctggtgccagtgccagtgtctgagccagtgcca
gagccagaacctgagccagaacctgagcctgttaaagaagaaaaactttcgcctgagcct
attttggttgatactgcctctccaagcccaatggaaacatctggatgtgcccctgcagaa
gaagacctgtgtcaggctttctctgatgtaattcttgcagtaaatgatgtggatgcagaa
gatggagctgatccaaacctttgtagtgaatatgtgaaagatatttatgcttatctgaga
caacttgaggaagagcaagcagtcagaccaaaatacctactgggtcgggaagtcactgga
aacatgagagccatcctaattgactggctagtacaggttcaaatgaaattcaggttgttg
caggagaccatgtacatgactgtctccattattgatcggttcatgcagaataattgtgtg
cccaagaagatgctgcagctggttggtgtcactgccatgtttattgcaagcaaatatgaa
gaaatgtaccctccagaaattggtgactttgcttttgtgactgacaacacttatactaag
caccaaatcagacagatggaaatgaagattctaagagctttaaactttggtctgggtcgg
cctctacctttgcacttccttcggagagcatctaagattggagaggttgatgtcgagcaa
catactttggccaaatacctgatggaactaactatgttggactatgacatggtgcacttt
cctccttctcaaattgcagcaggagctttttgcttagcactgaaaattctggataatggt
gaatggacaccaactctacaacattacctgtcatatactgaagaatctcttcttccagtt
atgcagcacctggctaagaatgtagtcatggtaaatcaaggacttacaaagcacatgact
gtcaagaacaagtatgccacatcgaagcatgctaagatcagcactctaccacagctgaat
tctgcactagttcaagatttagccaaggctgtggcaaagagatttcctattgtgtccgaa
atttgttccttccggtgggttcttggtctcgttgacttcaagaatgaagccacggaccct
cgcggagtgaagccgcagaccttcgacctttgcagtgagtgttacagtgttacagctcat
aaagacagcactgttctcttctcccggtgggttcatggtctcgctggcttcaggagtgaa
gctgcagaccttccgccgtctgcagttattttcaccagtagagcccggatgaaagaggag
cccgtagtaaccacggcaaccgaaaaacaaggcggaaaggtggcgggaaaagcgaccttt
tctgagcgcgtttgcctgttgagtggtagcctttcccctcaaccagcaatggaggagcag
ccccagatgcaagacgccgacgagcccgcggactccggaggggaaggccgggcaggcggg
ccaccgcaggtcgccggcgcccaggcggcgtgcagcgaggaccgcatgaccctgctcctc
aggctgagagcacagacaaaacaacaactcttagaatataaatcaatggttgatgcaaaa
ttaaaacaagcttcagaaagtaagcttttagaaatacagactgaaaagaacaaacagaag
attgatttggacagtatggaaaactcagagaggataaagatcatacgacaaaacctacag
atggagataaaaattactactgttattcaacatgtgttccagaaccttattttggggagt
aaagtcaattgggcagaggatcctgcccttaaggaaattgttctgcagcttgagaagaat
gttgacatgatgtaa

>gi568815593f:69089635_69309796|GENSCAN_predicted_peptide_2|217_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHSTFQRARGWGQTLGEVGENPLRRGRSTRGQ
LPDHSRDLEGTVGQIQGSLPSTPRYRLPSDWLIGGTTANPRRRLARLPPGSPHPHTPKTN
KVLAEERGIPAVGTGPTCQDAARLPQGSNPRRRTHLTARSNRLKVPSSHTPAGAVTGPPQ
RRGHRSASATAFTPRRRRHSQHRPYRPRCGNATNCFT

>gi568815593f:69089635_69309796|GENSCAN_predicted_CDS_2|654_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacacagcacgtttcagagagcacggggttggggc
cagacgcttggagaggttggggagaacccgctccggcgaggacgcagtacgcggggccag
ttgcccgaccattcccgagaccttgaagggacagtgggtcagatccagggttcgcttcct
tccacgccccgctaccgccttccttccgattggctgatcgggggcaccacagccaatcct
agacggcgattggccaggctaccgccagggtcgcctcacccgcacacgcctaagactaac
aaggtcctggcggaggagcgggggatcccggcagtaggtacaggacctacctgccaagat
gctgcacggttgccgcaaggctcgaaccctcggcgccggacccacctcactgcccggtcc
aacaggctcaaagtcccatcctcacacacacccgcgggcgccgtcactggccctccgcag
aggcgcggtcaccgctctgcctctgccaccgcctttactccccgacgccgtcgccatagt
cagcaccgtccctaccgcccaagatgcggaaacgcgacaaattgctttacctga

>gi568815593f:69089635_69309796|GENSCAN_predicted_peptide_3|846_aa
MALDVKSRAKRYEKLDFLGEGQVRLSGRTGRAPSGQPRAASTFAGFPVEARGLAWLLVLV
GGNRPDALAAHSLHPGGVSAGSHYSCECAVSYLKPICLGVSPEAHGEALVTTADYSGPRG
SILLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWIL
HRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGV
DMWAVGCILAELLLRSIPEIHTENLSTTTIHSWPRRKQNSIAPNVMTDHSIEKANEERQQ
LRVDRLEIVDLLTIILGNLLAIGIVAGIIFKVIRKMTCRLKNCTLLPYLLSYFKLFLCSI
EKVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD
LLDLIQGLFLFNPCARITATQALKMKYFSNRPGPTPGCQLPRPNCPVETLKEQSNPALAI
KRKRTEALEQGQQQCIKPTRASNLSDFLVCVCRQGAAKGEAAKQLRVQEIIAPKGSEDTQ
NVSNTKRGNLISRTSESRSTQWNVVSRAQPSEPGAMQVDSVRIEGNDRIPSWCVGNPPPL
ASGVRSAELSGCQKQLRPGKGQYQSQRVAARTPDSRCYFLTSVLPHQLCRGPCSCLAGAK
RFVAFCPCPRDLWNFELERDDLEYLVEEISKQQSIQEMAWVLLKAFHFKREAQHKSSENL
QPDNAIEKKIPFSKDKFKLAADICISNEEPNVNPQDNGENVSRACQRPLQQPLSSQSQKS
RRKKWFRGQGPGSPCCVQSKDLVPCVPATPAVAERGQGTAPSVNIEGASPKPWQLPHDVE
PAGAQK

>gi568815593f:69089635_69309796|GENSCAN_predicted_CDS_3|2541_bp
atggctctggacgtgaagtctcgggcaaagcgttatgagaagctggacttccttggggag
ggacaggtgaggctctctggaaggacggggagggccccaagcggacagccccgcgccgcc
tccacctttgcgggttttcccgtggaggccagaggtctggcttggctgctcgttctcgtt
gggggaaaccgtccagacgcacttgctgcccattctttacatcctgggggagtctctgct
ggtagccactacagctgtgaatgtgctgtgtcatacctgaagccaatatgtctcggagtt
tcacctgaggcccatggtgaggccctggttaccactgctgattattcagggcccaggggc
tctatactccttgatgcttttggacataaatctaatattagccttgtctttgattttatg
gaaactgatctagaggttataataaaggataatagtcttgtgctgacaccatcacacatc
aaagcctacatgttgatgactcttcaaggattagaatatttacatcaacattggatccta
catagggatctgaaaccaaacaacttgttgctagatgaaaatggagttctaaaactggca
gattttggcctggccaaatcttttgggagccccaatagagcttatacacatcaggttgta
accaggtggtatcgggcccccgagttactatttggagctaggatgtatggtgtaggtgtg
gacatgtgggctgttggctgtatattagcagagttacttctaaggagtataccagaaatt
cacactgagaatttatcaaccaccacaatccattcatggccaagaagaaaacagaattcc
atagcccctaatgttatgactgatcactccattgagaaagcaaatgaagagagacagcag
ttgagagtagacaggttagagattgtggacctgttaacaatcatacttggaaatttatta
gccattggcattgttgctggaatcatctttaaagttataaggaaaatgacatgcagacta
aagaattgtactcttctgccataccttttgtcctattttaagctgttcttgtgctcaatt
gaaaaggttccttttttgccaggagattcagaccttgatcagctaacaagaatatttgaa
actttgggcacaccaactgaggaacagtggccggacatgtgtagtcttccagattatgtg
acatttaagagtttccctggaatacctttgcatcacatcttcagtgcagcaggagacgac
ttactagatctcatacaaggcttattcttatttaatccatgtgctcgaattacggccaca
caggcactgaaaatgaagtatttcagtaatcggccagggccaacacctggatgtcagctg
ccaagaccaaactgtccagtggaaaccttaaaggagcaatcaaatccagctttggcaata
aaaaggaaaagaacagaggccttagaacaaggacagcagcagtgcatcaaacccactcgt
gcttcaaatctgtctgacttcctcgtgtgtgtgtgtagacagggagctgccaagggagaa
gcagccaagcagctaagagtccaggagataatagcgccaaagggatctgaggacactcaa
aatgtgtctaacaccaaaagaggtaacttgatctctaggacaagtgagtccaggagcaca
cagtggaatgtagtgagcagagcacagccttcagagccaggagcaatgcaggtagacagt
gtgagaattgagggaaatgataggatacccagctggtgtgtggggaatcccccaccccta
gcatctggtgtcagaagcgctgagctgagtggttgccaaaagcaactaagacctgggaag
ggccaatatcaatcacaacgggttgcggccaggacccctgactcccggtgctacttcctc
acctcagtgctccctcaccagctgtgtcggggcccttgttcctgcctggctggagcaaag
agatttgtggcattttgcccctgccctagagatctgtggaactttgaacttgagagagat
gatttagagtatctggtggaagaaatttctaagcagcaaagcattcaagagatggcttgg
gtactgttaaaggcattccattttaaaagggaagcacagcataaaagttcagaaaatttg
cagcctgacaatgcaatagaaaagaaaatcccattttctaaggataaattcaagctagct
gcagatatttgcataagtaatgaggagccaaatgttaatccccaagataatggggaaaat
gtctccagggcatgtcagagacctttgcagcagcctctctcatcacagagccagaagtct
cggaggaaaaaatggtttcgtgggcagggcccagggtccccgtgctgtgtgcagtctaag
gacttggtgccctgcgtcccagccactccagcggtggctgaaaggggccaaggtacagct
ccgtctgtgaatatagagggtgcaagccccaagccttggcagcttccacatgatgttgag
cctgcaggtgcacagaagtaa