GENSCAN 1.0	Date run:  8-Nov-116	Time: 14:07:04

Sequence gi568815593f:54355790_54556239 : 200450 bp : 41.40% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   2696   2775   80  1  2   57  103    22 0.126   1.25
 1.02 Intr +  10199  10351  153  2  0   79   35   105 0.009   2.57
 1.03 Intr +  30380  30563  184  2  1   38   61   177 0.198   8.87
 1.04 Intr +  31791  31844   54  2  0   76   49    81 0.426   1.26
 1.05 Term +  45854  45994  141  1  0   82   48   170 0.796   9.35
 1.06 PlyA +  46178  46183    6                               1.05

 2.00 Prom +  59952  59991   40                              -4.15
 2.01 Init +  64447  64567  121  0  1   68   74    99 0.788   6.90
 2.02 Intr +  71406  71433   28  1  1   27  101    43 0.047  -4.24
 2.03 Intr +  72410  72515  106  2  1   50   90    80 0.125   3.70
 2.04 Intr +  76668  76733   66  2  0   82   93    66 0.043   4.68
 2.05 Intr +  82757  82860  104  1  2   57   55    90 0.347   0.65
 2.06 Term +  93993  94353  361  0  1  109   43   160 0.791   6.62
 2.07 PlyA +  94695  94700    6                               1.05

 3.00 Prom +  97832  97871   40                              -6.65
 3.01 Sngl + 100001 100453  453  1  0   61   44   493 0.970  38.15
 3.02 PlyA + 100899 100904    6                              -1.75

 4.00 Prom + 101318 101357   40                              -6.25
 4.01 Init + 104912 105053  142  1  1   70   76    63 0.909   3.66
 4.02 Term + 106605 106780  176  1  2  101   49   122 0.968   6.54
 4.03 PlyA + 107795 107800    6                               1.05

 5.02 PlyA - 108503 108498    6                               1.05
 5.01 Sngl - 126652 126347  306  1  0   84   47   262 0.963  16.27
 5.00 Prom - 128077 128038   40                              -7.25

 6.02 PlyA - 128539 128534    6                               1.05
 6.01 Sngl - 130633 129977  657  1  0   29   48   263 0.870  12.32
 6.00 Prom - 134975 134936   40                              -5.45

 7.05 PlyA - 138820 138815    6                               1.05
 7.04 Term - 145293 144701  593  1  2    3   37   302 0.477  10.30
 7.03 Intr - 148181 147967  215  1  2   13   74   184 0.250   6.94
 7.02 Intr - 148919 148396  524  2  2  -15   48   427 0.265  19.22
 7.01 Init - 149862 149731  132  0  0   85   36    43 0.481  -1.01
 7.00 Prom - 151976 151937   40                              -4.85

 8.00 Prom + 152612 152651   40                              -7.95
 8.01 Init + 162164 163784 1621  1  1  115   98  1933 0.615 187.49
 8.02 Term + 164774 164844   71  0  2   71   39    56 0.640  -3.88
 8.03 PlyA + 165753 165758    6                               1.05

 9.00 Prom + 167893 167932   40                              -5.05
 9.01 Init + 169203 169286   84  2  0   84   28   119 0.075   6.37
 9.02 Intr + 173218 173297   80  0  2   63   34    80 0.036  -2.47
 9.03 Intr + 175273 175463  191  1  2   58   81   147 0.055   9.31
 9.04 Term + 187390 187643  254  2  2   67   39   196 0.441   7.42
 9.05 PlyA + 187698 187703    6                               1.05

10.04 PlyA - 188883 188878    6                               1.05
10.03 Term - 196478 196245  234  2  0   50   47   228 0.987  10.24
10.02 Intr - 196931 196795  137  0  2   53    3   152 0.634   2.57
10.01 Init - 198367 198274   94  1  1   54   93   113 0.937   8.99

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_1|203_aa
MLSNTLAISHMWLLSTRNVSSLNRDVWVMDEAGNLYSQQTNTGTENQTPHVLTDKWELNN
ENTWTQGGEHHTPGPVGGLGQETLAVAKATAEFWLLSWLCEEYLRAPDASAVTHCQTKCK
GLGSELTETMRPFLNSEKQSLVTIFVATTTVALAKRGITHSGGSPLACNEQSYGEAHVTV
AMRVTLEVKPAAPVKPLEDCSPG

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_1|612_bp
atgctgtccaatacactagccatcagccacatgtggctactgagcactagaaatgtgtca
agtctcaatcgagatgtgtgggtcatggatgaagctggaaacctttattctcagcaaact
aacacaggaacagaaaaccaaacaccacatgttctcactgataagtgggagttgaacaat
gagaacacatggactcagggaggggaacatcacacaccggggcctgtcgggggcctggga
caggaaactttagctgttgctaaggcaactgcagagttctggctcttaagctggctgtgc
gaggagtatctcagagccccagatgcctctgctgtcactcactgtcagaccaagtgcaaa
ggacttggtagtgaactcacagaaacaatgagaccatttttgaattctgaaaagcaatct
ctggtaaccatttttgttgcaactactactgtggcccttgcaaaacgagggatcactcat
tctgggggcagccctctggcatgtaatgagcagtcctatggagaggcccatgtgacagta
gccatgcgagtgacactggaagtgaaacctgcagctccagtcaagcctttagaagactgc
agccctggctga

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_2|261_aa
MTLNEHAAFKHLFNKAHLAPPLIHLTLSGHGTCFREHRVGVLSEKQQASWQCDSRLFQLS
ASSHSATTAKSTLPFHEQSIWRLSEAARVPSQDGGCLASEEETEENKFADAVFPAGNMTD
TFKSPRKQLFPRWYKILSLPQRVYRGHAEILVSSLGMMFSFGSRTLKMPSCYLEHSDVLP
LLLCSKLPVAHSVSLLIPAESWLFLENLLGLQAKLLLEFAACVQWSMISKSLQFNVHPTD
DSDLGLVEDSIAASILSSLST

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_2|786_bp
atgactcttaacgagcatgctgccttcaagcatctgtttaacaaagcacatcttgcaccg
cccttaatccatttaaccctgagtggacatggcacgtgtttcagagagcaccgggttggg
gttttaagtgaaaagcagcaggcgtcatggcagtgtgacagcagactgtttcagctgtct
gcttcttcacactctgccaccactgcaaagagcaccttgcccttccatgagcagtccatc
tggcggctgagcgaggctgctcgagtaccctcacaagatggtggctgccttgcctcagag
gaagagactgaagaaaataagtttgcagatgccgtattccctgctgggaacatgactgac
acattcaagtctcctcgaaagcagttatttccaagatggtataagatcctgtccctgcct
cagagagtgtatcgtggccacgctgagattcttgtatcttctcttggcatgatgttttct
tttggctccaggaccttgaagatgccatcctgttacctggaacactcagatgtcctccct
ctccttctctgctcaaagcttcctgtggcccactctgtcagccttcttatcccagctgag
tcatggctctttttagaaaaccttctcggacttcaagccaagctgttattggaatttgcc
gcctgtgttcaatggtcaatgatctccaagtcactgcaatttaacgttcaccctactgat
gactctgaccttggtttggtcgaggacagcattgctgcatctatactgtcatccttatcc
acctaa

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_3|150_aa
MAKIILRHLIEIPVRYQEEFEARGLEDCRLDHALYALPGPTIVDLRKTRAAQSPPVDSAA
ETPPREGKSHFQILLDVVQFLPEDIIIQTFEGWLLIKAQHGTRMDEHGFISRSFTRQYKL
PDGVEIKDLSAVLCHDGILVVEVKDPVGTK

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_3|453_bp
atggcaaaaatcattttgaggcacctcatagagattccagtgcgttaccaggaagagttt
gaagctcgaggtctagaagactgcaggctggatcatgctttatatgcactgcctgggcca
accatcgtggacctgaggaaaaccagggcagcgcagtctcctccagtggactcagcggca
gagacgccaccccgagaaggcaaatcccactttcagatcctgctggacgtggtccagttc
ctccctgaagacatcatcattcagaccttcgaaggctggctgctgataaaagcacaacac
ggaaccagaatggatgagcacggttttatctcaagaagcttcacccgacagtacaaacta
ccagatggtgtggaaatcaaagatttgtctgcagtcctctgtcatgatggaattttggtg
gtggaagtaaaggatccagttgggactaagtga

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_4|105_aa
MSRAQGFSQWTLAALEAWQNCWQKWQQHGLGGRRCLQKQGVSQKDMQAYCAPHYEQHAKS
AWFLPKILPERCPASPRLLLATSALTAFGNRMHLPGTLALLKEPP

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_4|318_bp
atgagtagggctcaaggcttcagtcagtggactcttgctgccttggaagcctggcaaaac
tgctggcaaaagtggcagcagcatggtctgggaggcaggcgatgccttcagaaacaaggt
gtcagtcaaaaagatatgcaagcatactgtgccccacactatgagcagcatgccaaaagt
gcctggttcctacccaaaatacttcctgaaagatgtccagctagtccaaggctactgtta
gccaccagcgcactgactgcatttggcaatcgcatgcacttaccaggcacgctggccctt
ctcaaagagccaccttga

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_5|101_aa
MAPRLLKLQFLPWLVTSWAKVVNWVEKLLSGDPQEPPTNHLMNCPDPSSLAIKDLVTRLL
RMLPENSLQLTAFWGAALAEENGLVQSHASFRHSLHPTTNQ

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_5|306_bp
atggctcccaggctcctcaaactccaatttctcccttggctggtgacatcttgggctaag
gtggttaattgggtagagaaacttctttcaggagacccacaggagcctcccactaaccac
ttgatgaactgcccagatccctcctctttagcaataaaggacttggtcacccggctgctg
cgaatgttgcccgaaaacagccttcagctgactgccttctggggggctgccttggctgaa
gaaaacggcctcgtccagagtcacgcttccttccggcacagcctgcatccaacgactaat
caatga

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_6|218_aa
MNIDAKILNKILANRIQQHIKKLIQHDQVGFIPGMQGWFNICKSINIIHHINRTKDKNHM
IISIDAEKAFDKIQQPFMLKTLSKLGTDGTYLKTIRAIYDKPTANIILNGQKPEAFPLKT
GTRQGCPLSPLLFNIVLEVLTRATRQEKEIKGNQLGKEEVKLSLFADDMIIYSENPITSA
QNLLSKQISFSKVSGYKINVQNHKHSYTPITDKQRAKS

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_6|657_bp
atgaacattgatgcaaaaatcctcaataaaatactggcaaaccgaatccagcagcacatc
aaaaagcttatccaacacgatcaagttggcttcatccctgggatgcaaggctggttcaac
atatgcaaatcaataaacataatccatcatataaacagaaccaaagacaaaaaccacatg
attatctcaatagatgcagaaaaggcctttgacaaaattcaacagcccttcatgctaaaa
actctcagtaaactaggtactgatgggacgtatctcaaaacaataagagctatttatgac
aaacccacagccaatatcatactgaatggacaaaaaccggaagcattccctttgaaaact
ggcacaagacagggatgccctctctcaccactcctattcaacatagtgttggaagttctg
accagggcaaccaggcaggagaaagaaataaagggtaatcaattaggaaaagaggaagtc
aaactgtctctgtttgcagatgacatgattatatattcagaaaaccccatcacctcagcc
caaaatctccttagtaagcaaatctccttcagcaaagtctcaggatacaaaatcaatgtg
caaaatcataagcattcttatacaccaataacagacaaacagagagccaaatcatga

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_7|487_aa
MNLLGSYTFTPTEVIPQNMALQNISSSDLRPYNSDVIPRNNLEREEQEYSEVTEEVTEQV
YLPAKAKVAKEGEVHPYPSAPPHYYFEENDPPDLSFPEDTGRKVVAPVTVRAAPRGTALS
SIQAGIQQARQEGDLEAWQFPVRIHPPDQQGNIIATFEPFPFKLLKEFKQAISQYGPGSP
FVMGLLKNVTVSSQKIPTDWDTLTRACLTPAQFLQFKTCAMKQGPREPYVDFIARLQESL
KKMIADSAAQEIVLQLLAFDNAHPDCQAALRPIRGKAHLVDYVKACDGIGADFVGILDNH
FPKTKLFQFLKLTNWILLKITKFKPIEGAENVFADGSSNGKASYFGSKSKVFQTSCTSAQ
KAELVAVIEVLTAFDMPINVISDSSYVVHSTQLIENAQLRFHTDEQLMTLFTQLQTAVRS
RMHPFYSTHIRAHTPLPGPLTEGNQMADCLLATAISNARHFHNLTHVNASGLKCRYSITW
KEAKAII

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_7|1464_bp
atgaacctgttgggcagttatactttcacccctacagaggtgatacctcaaaatatggct
ctgcaaaatatctcaagcagtgatcttaggccttacaatagtgatgttatccccagaaac
aacttggagagggaggaacaagagtatagtgaagtaacagaagaggttacagagcaggtt
tatttgccagctaaagccaaagtggcaaaggagggagaggttcatccctacccttctgca
ccccctcattattattttgaagaaaatgaccccccagatctttcttttccggaggacact
gggcgaaaagtagttgcccccgtgactgttcgagcagcacctcgagggactgctcttagt
tctattcaggcaggcattcagcaagctagacaagagggtgatttagaggcttggcagttc
cctgttagaatacaccccccagatcaacagggaaatattatagctacatttgagcctttt
ccttttaaattactcaaagaattcaaacaagcaataagtcagtatggaccaggttctccc
tttgtaatgggactgttaaagaatgttacagtttccagtcagaagattcctactgactgg
gacactcttactcgagcttgtctaactcctgctcagttcttacaatttaaaacttgtgct
atgaaacagggaccaagggaaccatatgttgattttatagctcggttacaggagtctctt
aaaaagatgattgcagattcggctgctcaggagatagtgttgcagttactagctttcgac
aatgctcatcccgattgccaggctgctctgcgacctatcagagggaaagcacatttagtt
gattatgtcaaggcctgtgatggtattggagctgactttgtgggtattctcgataatcat
tttcctaaaacgaagctgtttcagtttctgaaattaactaattggattctccttaaaata
actaaatttaaaccaattgaaggtgctgagaatgtttttgcagatgggtctagtaatggt
aaagcttcttattttggctcaaaaagtaaagttttccagacgtcctgtacttcagctcaa
aaagcggagcttgtagctgtaattgaggtattgactgcttttgatatgcctattaatgtg
atttccgattcttcatacgtggttcattccacacagttaattgaaaatgctcagttacga
tttcatacagatgaacaactgatgactttatttacccaactgcaaacagcagttaggagt
agaatgcaccctttttacagcactcacattagagctcatacacctcttccaggacctttg
actgaagggaatcaaatggctgattgcctacttgctactgcaatatctaatgctagacac
tttcacaatttaacccatgttaatgcttctggtctcaaatgcagatacagcattacctgg
aaagaagctaaagctattatctag

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_8|563_aa
MALRARALYDFRSENPGEISLREHEVLSLCSEQDIEGWLEGVNSRGDRGLFPASYVQVIR
APEPGPAGDGGPGAPARYANVPPGGFEPLPVAPPASFKPPPDAFQALLQPQQAPPPSTFQ
PPGAGFPYGGGALQPSPQQLYGGYQASQGSDDDWDDEWDDSSTVADEPGALGSGAYPDLD
GSSSAGVGAAGRYRLSTRSDLSLGSRGGSVPPQHHPSGPKSSATVSRNLNRFSTFVKSGG
EAFVLGEASGFVKDGDKLCVVLGPYGPEWQENPYPFQCTIDDPTKQTKFKGMKSYISYKL
VPTHTQVPVHRRYKHFDWLYARLAEKFPVISVPHLPEKQATGRFEEDFISKRRKGLIWWM
NHMASHPVLAQCDVFQHFLTCPSSTDEKAWKQGKRKAEKDEMVGANFFLTLSTPPAAALD
LQEVESKIDGFKCFTKKMDDSALQLNHTANEFARKQVTGFKKEYQKVGQSFRGLSQAFEL
DQQAFSVGLNQAIAFTGDAYDAIGELFAEQPRQDLDPVMDLLALYQGHLANFPDIIHVQK
AGLAFTGEVLTAFLVGQSVYEQP

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_8|1692_bp
atggcgctgcgcgcccgggcgctgtacgacttcaggtcggagaacccaggagagatctcg
ctgcgagagcacgaggtgctgagcctgtgcagcgagcaggacatcgagggctggctcgag
ggggtcaacagccgcggcgaccgcggcctcttcccggcctcctatgtgcaggtgatccgc
gcccccgagcctggcccggcgggagacggcggcccgggcgccccggcccgctacgccaat
gtgccccccgggggcttcgagcccctgcctgtcgcgccccccgcctccttcaagccgccg
cctgacgccttccaggcgctgctgcagccacagcaggcgccgcctccgagcaccttccag
ccgcccggcgcgggcttcccgtacggcgggggcgccctgcagccgtcgcctcagcagctc
tacggcggctaccaggccagccaaggcagcgatgatgactgggacgacgagtgggacgac
agctccacggtggcggacgagccgggcgctctgggcagcggagcatacccggacctcgac
ggctcgtcttcggcgggtgtgggcgcagccggccgctaccgcctgtccacgcgctccgac
ctgtccctgggttcccgcggcggctcggtccccccgcagcaccacccgtcggggcccaag
agctcggccaccgtgagccgcaacctcaatcgcttctccaccttcgtcaagtccggcggg
gaggccttcgtgctgggggaggcgtcaggcttcgtgaaggacggggacaagctgtgcgtg
gtgctggggccctatggccccgagtggcaggagaacccctacccgttccagtgcaccatc
gacgaccccaccaagcagaccaagttcaagggcatgaagagctacatctcctacaagctg
gtgcccacgcacacgcaggtgccggtgcatcggcgctacaagcacttcgactggctgtac
gcgcgcctggcggagaagttcccggtcatctccgtgccccacctgcccgagaagcaggcc
accggccgcttcgaggaggacttcatctctaagcgcaggaagggcctgatctggtggatg
aaccacatggccagccacccagtgctggcgcagtgcgacgtcttccagcacttcctgacg
tgccccagcagcaccgacgagaaagcctggaagcagggcaagaggaaggccgagaaggac
gagatggtgggcgccaacttcttcctgacccttagcacgccccccgccgctgcccttgac
ctgcaggaggtggagagcaagatcgacggcttcaagtgcttcaccaagaagatggacgac
agcgcgctgcagctcaaccacacggccaacgagttcgcgcgcaagcaggtgaccggcttc
aaaaaggagtatcagaaggtgggccagtccttccgcggcctcagccaggcctttgagctg
gaccagcaggccttctcggtgggcctgaaccaggctatcgccttcaccggagatgcctat
gacgccattggcgagctcttcgcggagcagcccaggcaggacctggatcccgtcatggac
ctattagcgctgtatcaggggcatctggctaacttcccggacatcatccacgttcagaaa
gcgggtctggcctttactggtgaagtgctcactgcctttctggtgggccagtccgtttat
gagcaaccctga

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_9|202_aa
MPSQEAVGAEPHRSGSWPVGTSMGSGGPLLLEVIAETRKIKWGADMARPALKMDRNLNCE
FLEASFTGAPWLPEAGLLEVTPVGWAEMRRLLEYSRGRVGFGKEQVNSRHLPGIMAGPGA
LTKVKESRRHVEEGKMEVQKADGIQDRCNTISFATLAEIHHFHQIRVRDFKSQMQHFLQQ
QIIFFQKVTQKLEEALHKYDSV

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_9|609_bp
atgccaagccaagaagccgtgggtgcagagcctcatcgcagtgggagctggcctgtcggg
accagcatgggctctggagggccactgctgttggaggtgatagcggaaacacggaagatc
aaatggggtgccgacatggccaggcctgcacttaagatggacagaaatttaaactgcgag
ttcctggaagcatccttcactggtgcaccctggctccctgaggcagggcttttggaagtt
actcctgttggttgggcagagatgaggaggctcttagagtactccaggggaagagttggc
tttggaaaggaacaggtgaactcgagacacctgccaggtatcatggcaggacctggagct
cttaccaaagtcaaggagagtaggcgacacgtggaggaagggaagatggaggtgcagaag
gctgacggcattcaggatcgctgtaacactatttcttttgccactttggctgaaattcac
cacttccatcaaattcgagtgagagactttaaatcacagatgcagcatttcttacaacaa
caaataatatttttccaaaaagttacccagaagttggaagaagctcttcacaaatatgat
agtgtttaa

>gi568815593f:54355790_54556239|GENSCAN_predicted_peptide_10|154_aa
MVAIDEQMEAEERFNTSLAKGNLVVKEQQSPVPTTVPEAQQAFNKYLQNEGLYRSQRPGC
LHRADGIIKLFKQNDSNMCLRRTNGSNLADADVTVKTPASRSRMSQKGVMRGNGSRRGGT
DLNSAGWWTDAAPTAEQSQHCGCSLLLEPTPPFS

>gi568815593f:54355790_54556239|GENSCAN_predicted_CDS_10|465_bp
atggtagcaatagatgaacaaatggaagcagaagaaaggttcaatacaagccttgccaag
ggcaatctggtggtaaaagagcagcagagccctgtgcctacaacagtgcccgaagcacaa
caagcattcaataaatatctgcagaatgaaggactctatcggtcccagcgtccaggatgt
ctccaccgtgccgatggcatcatcaagcttttcaagcaaaatgactccaatatgtgttta
aggagaacaaatggcagcaacttggcagacgcagatgtgacagtcaaaacaccagccagc
cgctcacgaatgtctcagaagggtgtgatgcgtggtaatgggtcacgtcgcggaggcaca
gatttgaattccgcaggctggtggacagacgcggcacccacagcggaacaaagccagcac
tgtggctgctctctcctcctggagccaactcctccattctcctga