GENSCAN 1.0	Date run:  4-Nov-116	Time: 12:18:22

Sequence gi568815593f:156750563_156951177 : 200615 bp : 39.99% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7019   7142  124  2  1   71   78   150 0.598  11.97
 1.02 Term +   8655   8828  174  2  0  114   48    66 0.916   1.98
 1.03 PlyA +   9015   9020    6                               1.05

 2.00 Prom +  17141  17180   40                              -4.75
 2.01 Init +  17699  17812  114  1  0   96   82    50 0.818   5.46
 2.02 Intr +  27303  27377   75  2  0   94   67   122 0.325   9.49
 2.03 Intr +  29131  29235  105  0  0   72   83    32 0.019   0.59
 2.04 Intr +  33351  33509  159  2  0   54   72   123 0.024   6.56
 2.05 Term +  34213  34356  144  0  0   48   39   115 0.920  -0.47
 2.06 PlyA +  34569  34574    6                              -0.45

 3.00 Prom +  34697  34736   40                              -6.15
 3.01 Sngl +  36613  37569  957  0  0   60   43   327 0.962  21.78
 3.02 PlyA +  37629  37634    6                              -0.45

 4.00 Prom +  37913  37952   40                              -3.65
 4.01 Init +  39282  39481  200  2  2   62   86    85 0.058   4.12
 4.02 Intr +  52163  52269  107  2  2   72   36   143 0.130   6.44
 4.03 Intr +  56400  56737  338  1  2   33  116   333 0.140  24.91
 4.04 Intr +  63169  63279  111  0  0   56   97    44 0.066   1.76
 4.05 Term +  66741  66920  180  2  0   20   38   125 0.008  -2.67
 4.06 PlyA +  67393  67398    6                               1.05

 5.04 PlyA -  68871  68866    6                               1.05
 5.03 Term -  69883  69653  231  1  0   68   55   130 0.084   3.19
 5.02 Intr -  79546  79461   86  2  2   73   78    65 0.049   2.62
 5.01 Init -  81561  81498   64  0  1   54   98    34 0.393   2.37
 5.00 Prom -  85862  85823   40                              -4.85

 6.00 Prom +  99335  99374   40                              -3.85
 6.01 Sngl + 100001 100618  618  1  0   91   43   917 0.816  83.44
 6.02 PlyA + 101241 101246    6                               1.05

 7.00 Prom + 102238 102277   40                              -5.75
 7.01 Init + 110430 110518   89  2  2   83   41   108 0.505   5.76
 7.02 Intr + 127961 128158  198  2  0  -40   42   247 0.271   4.84
 7.03 Term + 128282 128444  163  2  1   30   47   185 0.378   5.03
 7.04 PlyA + 128997 129002    6                               1.05

 8.00 Prom + 133630 133669   40                              -5.15
 8.01 Init + 139166 139307  142  1  1   52   98   137 0.822  11.44
 8.02 Term + 159939 160090  152  1  2   93   49    62 0.040  -0.11
 8.03 PlyA + 160580 160585    6                              -0.45

 9.06 PlyA - 161484 161479    6                               1.05
 9.05 Term - 163854 163637  218  1  2   69   54   117 0.278   2.72
 9.04 Intr - 171654 171537  118  0  1   78   94    77 0.716   6.42
 9.03 Intr - 175750 175701   50  2  2  115   98    49 0.983   6.08
 9.02 Intr - 177225 177178   48  1  0   97   81    55 0.253   3.43
 9.01 Intr - 199169 199089   81  0  0  124   75    81 0.857   9.09

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  33285  33509  225  2  0   88   72   169 0.920  13.82


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_1|99_aa
XLESPTRSLVMEAPKGVEINAEAGNMEATCRTELRLESKDGEIKLDAAKIRLPRLPHGSY
TPTGTRQKVFEICVCANGRLFLSQAGAGSTCQINTSVCL

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_1|300_bp
nngttggagtccccaacccggtctctagtgatggaggccccaaaaggagtggaaatcaat
gcagaagctggcaatatggaagccacctgcaggacagagctgagactggaatccaaagat
ggagagattaagttagatgctgcgaaaatcaggctacctagactgcctcatggatcctac
acgcctacaggaacgaggcagaaggtcttcgagatctgcgtctgcgccaatgggagatta
ttcctgtctcaggcaggagctgggtccacttgtcagataaacacaagtgtctgcctctga

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_2|198_aa
MGETIDERRHCGRTTWIHSPQLILHFEHLISPGLPQRQTVLINKKALTRRSPLTALDFSA
PVTVKRSSPPTAEIRHSLITCSWKDTEFPPHCSGERALEHNSFPAREQNWIEHDFEELTE
VGFRRSVITNFSELKEHVLTHRKEAKNLEKKACLTRGPEGSTKHGKKQLVPATAKTWQIV
KTMDVMKKLHKLTGKISS

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_2|597_bp
atgggtgagacaatcgatgagagaaggcattgtggcagaaccacttggatccactcacca
caattaattcttcattttgagcatctcatctctcctggtcttccacaacgacagacagtc
ctcatcaacaagaaggctctcaccagacgcagccccttgaccgccttggacttctcagca
cccgtaactgtaaagagaagctccccgcctacagcagagattagacacagcctcattacc
tgctcctggaaggatacagaatttcctccacattgctcaggagaaagagccttagaacac
aactccttcccagcaagagaacaaaactggatagagcatgactttgaagagttgacagaa
gtaggcttcagaaggtcagtaataacaaacttctctgagctaaaggagcatgttctaacc
catcgcaaggaagctaaaaaccttgaaaaaaaggcctgccttacaagaggtcctgaagga
agcactaaacatggaaagaaacaactggtaccagcgactgcaaaaacatggcaaattgta
aagactatggacgttatgaagaaactgcataaattaacgggcaaaataagcagctag

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_3|318_aa
MSELTFTIATKRIKYLGIQLTRDVKDLFKENYKPLLNKIKEDKNKWKNIPCSWAGRINIV
KMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFIGNQKRAHIAKTILSKKNKAGGITLP
DFKLYYKATVTKTAWYWYQNRYIDQWNRTEASEITPHIYNLLIFDKPDRNKQWEKDSLFN
KWCWENWLATGRKMKVDPFLIPFTKINSRWIKDLNVRNKTIKALEENLGYTIQDVGMGKD
LMTKTPKAMATKAKIDKWDLIKLKSFCTAKESIIRVDRQPTEWEKMFAIYPSDKGLISRI
YKGHKEIYKKKTNNLIKK

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_3|957_bp
atgagtgaactcacattcacaattgctacaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaacaagataaaa
gaagacaaaaacaaatggaagaacattccatgctcatgggcaggaagaatcaatatagtg
aaaatggccatactgcccaaggtaatttatagattcaacgccatccccatcaagctacca
atgactttcttcacagaattggaaaaaacaactttaaagttcatagggaaccaaaaaaga
gcccacattgccaagacaatcctaagcaaaaagaacaaagctggaggcatcacgctacct
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactggtaccaaaac
agatatatagaccaatggaacagaacagaggcctcagaaataacaccacacatctacaac
cttctgatctttgacaaacctgacagaaacaagcaatgggaaaaggattccctatttaat
aaatggtgctgggaaaactggctagcaacaggtagaaagatgaaagttgatcccttcctt
atacctttcacaaaaattaactcaagatggattaaagacttaaatgtaagaaataaaacc
ataaaagccctagaagaaaacctaggctataccattcaggatgtaggcatgggcaaggac
ctcatgactaaaacaccaaaagcaatggcaacaaaagccaaaattgacaaatgggatcta
attaaattaaagagcttctgcacagcaaaagaaagtatcatcagagtggacaggcaacct
acagaatgggagaaaatgtttgcaatctatccatctgacaaagggctaatatccagaatc
tacaaaggacacaaagaaatttacaagaaaaaaacaaacaacctcatcaaaaagtag

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_4|311_aa
MNELSFTITTKRIKYLGMQLKRNVKDFFKENYKPLLNEIKEDKNKWKNIPCSWIKRINIV
KVATLPSWLTSLVEEQSSGQHPYNVMTISYQKCAGTDNRIQKDCSSSPATEQSWMENDFD
ELTQVDFRRLVITNFSELNEDVQTHRGEAKNLKKRLDERLTRINSVKTLNDLMELKNTAR
ELHDACTRFNSRFDQVEERVSVIEDQINEIQQENKESLQTLWASINGLKSVGVSNAKNLF
FLPAEFSPMKLLPPESPKIQRDSSAATWWKIYGQQKESDIQKMEVRYRNNWFGYSSVFAL
FEHGSNNVGYI

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_4|936_bp
atgaatgaactctcattcacaattaccacaaagagaataaaatacctaggaatgcaactt
aaaaggaatgtgaaggacttcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggacaaaaacaagtggaagaacattccatgctcatggataaaaagaatcaatatagtg
aaggtggccacactgccaagctggctgacatctctggttgaggagcaatcatccgggcag
catccttacaatgtaatgacaatcagttaccaaaaatgtgcaggcactgataacaggatt
cagaaggattgcagctcctcgccagcaacggaacaaagctggatggagaatgactttgat
gagctgacacaagtagacttcagaaggttggtaataacaaacttctccgagctaaatgag
gatgttcaaacccatcgtggggaagctaaaaaccttaaaaaaagattagatgaaaggcta
actagaataaacagcgtaaagaccttaaatgacctgatggagctgaaaaacacagcacga
gaacttcatgacgcatgcacaagattcaatagccgattcgatcaagtagaagaaagggta
tcagtgattgaagatcaaattaatgaaatacagcaagaaaacaaggaaagcctgcagacc
ttgtgggctagtataaatggattgaagtctgtaggagtttcaaatgcaaagaacttgttc
ttcttacctgctgagttttcccccatgaaacttttgcccccagaatcaccgaagattcag
agagactccagtgcagccacatggtggaagatttatggacagcaaaaggaaagtgatata
cagaaaatggaagtgagatacagaaacaactggtttggttacagctccgtgtttgccttg
tttgaacatggttcaaataacgttggctacatttga

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_5|126_aa
MPVFALCPGDPRPGVACGFWEEWSSIVMMEKGVPVIIFTLQGPGGWVWCEFSAHIFREAP
VLLTFPSEHPETSKQMAAGGLGGTEGSSRGNQWQEAPATTAGHQASSCGKLWERHKMLPL
GYPYEC

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_5|381_bp
atgccagtttttgccctgtgtcctggagacccacgacctggcgtggcatgtgggttttgg
gaagaatggagctccattgtcatgatggaaaagggtgttccagtcatcatattcacgttg
caaggaccaggtggatgggtctggtgcgagttctcagctcacatcttcagagaggcccct
gtcttactcacgttcccctcggagcaccctgagacaagcaagcagatggcagcaggtggc
ttgggaggcacagaaggcagtagcaggggaaatcagtggcaagaggcaccagccaccacc
gcaggccaccaagcttcatcctgtgggaagctctgggaaaggcataaaatgctgcctctg
ggttacccctatgagtgctga

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_6|205_aa
MAASTASHRPIKGILKNKTSTTSSMVASAEQPRRSVDEELSKKSQKWDEINILATYHPAD
KGYGLMKIDEPSPPYHSMMGDDEDACRDTETTEAMAPDILAKKLAAAEGLEPKYRIQEQE
SSGEEDSDLSPEEREKKRQFEMRRKLHYNEGLNIKLARQLISKDLHDDDEDEEMLETADG
ESMNTEESNQGSTPSDQQQNKLRSS

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_6|618_bp
atggcggcctcgacggcctcccaccggcccatcaaggggatcttgaagaacaagacctct
acgacttcctctatggtggcgtcggccgaacagccccgcaggagtgtcgacgaggagctg
agcaaaaaatcccagaagtgggatgaaattaacatcttggcgacctatcatccagcagac
aaaggctatggtttaatgaaaatagatgaaccaagccctccttaccatagtatgatgggt
gatgatgaagatgcgtgtagggacaccgagaccactgaagccatggcgccagacatccta
gccaagaaattagctgctgctgaaggcttggagccaaagtaccggattcaggaacaagaa
agcagtggagaggaggatagtgacctctcacctgaagaacgagaaaaaaagcgacaattt
gaaatgagaaggaagcttcactacaatgaaggactcaatatcaaactagccagacaatta
atttcaaaagacctacatgatgatgatgaagatgaagaaatgttagagactgcagatgga
gaaagcatgaatacggaagaatcaaatcaaggatctactccaagtgaccaacagcaaaac
aaattacgaagttcatag

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_7|149_aa
MATQNVMCSQQQQQQQQNPRDCSKCKILAGNETAQCCGELQGQWCGHDGQSPPRPPVIEA
RLSKTDSKPGERSKKLDGAVNLPQDMQQRVSDLHEDLIVFRDVKFSPSTRAASQRRASCG
SPPLVNLKRLKGDAPGDKKLSLQELTNSG

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_7|450_bp
atggctactcagaatgtaatgtgtagccagcagcagcagcagcagcagcaaaatccaaga
gattgttcaaaatgcaaaatcttagccggaaatgaaacagcccagtgttgtggagaattg
cagggccagtggtgtggtcatgatggacagtctcctccaaggccacctgtgattgaagcc
cgattgtcaaaaacagacagtaaaccaggagagagaagcaagaagttagatggtgctgtc
aacttgccacaggatatgcagcaaagggtatcggacttgcatgaagatctcattgtcttc
cgggatgtgaagttctctcctagtaccagggctgcaagccagagaagagccagctgtggg
tccccacctctagtgaacctcaagagactcaaaggggatgctccaggagacaagaagctc
tctcttcaggagctgaccaacagtgggtag

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_8|97_aa
MWEVGYEKAWKETLDNWTLSLKHAGFQVPVSVRVEMASRLLEILREPGTSEIIQIIGIMK
WVIKIEMALQTVSCLGSGTGTLLFLTMPQLPTGPFGT

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_8|294_bp
atgtgggaggtcggatatgagaaagcctggaaggagacgctagacaactggacgctgtct
ttgaaacatgctggcttccaagtgccagtgagtgtgagggtggaaatggctagcaggctg
ttggaaatactcagagaaccaggcacatcagaaattatccaaataattggaatcatgaaa
tgggtgataaagatagaaatggctttgcagactgtaagctgcttaggatcagggactggg
actctcttgttcctcacaatgccccagctccccacagggccctttggcacatag

>gi568815593f:156750563_156951177|GENSCAN_predicted_peptide_9|171_aa
XSETVLPSDSWSSVESTSADTVLLTSKVLVDSSGHGQVSQVGTASDTAVPEQNKTTKTGQ
MDGIPMSMKNEMPISQLLMIIAPSLGFVLFALFVAFLLREEAVKGEPGRKLNEARWDTFK
WECVELTHEELKPAVSRLNERLTGIQQWVAGETLCLSKENRKLRSGLPGWR

>gi568815593f:156750563_156951177|GENSCAN_predicted_CDS_9|516_bp
naatcagaaactgtcctccccagtgattcctggagtagtgttgagtctacttctgctgac
actgtcctgctgacatccaaagtcttagtggacagctcaggccatggccaggtgtctcaa
gtaggaactgcatctgatacagcagttcctgagcagaacaaaacaacaaaaacaggacag
atggatggaatacccatgtcaatgaagaatgaaatgcccatctcccaactactgatgatc
atcgccccctccttgggatttgtgctcttcgcattgtttgtggcgtttctcctgagagag
gaagctgtaaagggagaacctggcaggaaacttaatgaagccaggtgggacacatttaaa
tgggaatgtgttgaactaactcatgaagagctaaagccagctgtcagcaggcttaatgaa
aggttaacaggaatccagcaatgggtggctggggagactctttgtctctctaaagaaaac
aggaagttgagaagtgggctccctgggtggaggtga