GENSCAN 1.0	Date run:  4-Nov-116	Time: 17:56:10

Sequence gi568815593f:140014182_140215147 : 200966 bp : 42.74% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   4092   4189   98  2  2   78   57   136 0.883   9.33
 1.02 Term +  10753  10870  118  1  1   61   54   101 0.452   1.03
 1.03 PlyA +  11393  11398    6                               1.05

 2.04 PlyA -  13409  13404    6                               1.05
 2.03 Term -  15669  15614   56  1  2  137   50    21 0.353  -0.06
 2.02 Intr -  16295  16203   93  0  0   85   83    62 0.204   4.42
 2.01 Init -  28888  28189  700  1  1   62  101   927 0.715  84.99
 2.00 Prom -  33567  33528   40                              -7.55

 3.04 PlyA -  34373  34368    6                               1.05
 3.03 Term -  37060  36936  125  2  2   74   44    81 0.406  -0.13
 3.02 Intr -  42851  42819   33  0  0   90  105    61 0.634   5.28
 3.01 Init -  44310  44220   91  0  1   79   47   108 0.489   4.57
 3.00 Prom -  49506  49467   40                              -6.25

 4.00 Prom +  65498  65537   40                              -4.05
 4.01 Init +  75299  75370   72  1  0   57   98    32 0.088   2.22
 4.02 Intr +  93503  93720  218  1  2   13   68   219 0.317   8.78
 4.03 Intr +  99533  99677  145  2  1  103    3   124 0.539   4.76
 4.04 Term +  99860 100969 1110  1  0  136   43  1596 0.994 150.96
 4.05 PlyA + 101062 101067    6                               1.05

 5.00 Prom + 102733 102772   40                              -6.95
 5.01 Init + 116522 116628  107  1  2   49   58   114 0.344   4.24
 5.02 Intr + 126501 126664  164  0  2   76   87   125 0.184   9.90
 5.03 Intr + 126838 126853   16  2  1  108   76     9 0.058  -4.62
 5.04 Term + 129571 129751  181  1  1  123   48    96 0.173   5.20
 5.05 PlyA + 130731 130736    6                              -3.64

 6.12 PlyA - 130774 130769    6                              -0.45
 6.11 Term - 131985 131724  262  2  1   56   49   143 0.876   1.21
 6.10 Intr - 132303 132158  146  0  2   50   80   153 0.716   8.86
 6.09 Intr - 132745 132531  215  2  2   81   24   148 0.763   5.21
 6.08 Intr - 138498 138376  123  1  0   74   85    94 0.974   7.34
 6.07 Intr - 139420 139166  255  2  0   80   81   178 0.984  12.79
 6.06 Intr - 139945 139874   72  2  0   72   82    73 0.756   3.56
 6.05 Intr - 140515 140460   56  0  2   58   51    66 0.792  -2.40
 6.04 Intr - 141583 141415  169  2  1    5   41   195 0.754   4.58
 6.03 Intr - 143244 143127  118  0  1   86   43    57 0.351   0.12
 6.02 Intr - 145543 145418  126  1  0   87   84     9 0.497   0.36
 6.01 Init - 146020 145943   78  1  0   45  103    58 0.952   4.11
 6.00 Prom - 147124 147085   40                              -4.75

 7.08 PlyA - 148415 148410    6                               1.05
 7.07 Term - 149053 148986   68  2  2  116   50    39 0.267   0.02
 7.06 Intr - 152251 151972  280  1  1  102   86    43 0.403   1.63
 7.05 Intr - 157998 157958   41  1  2  103   81    44 0.490   2.22
 7.04 Intr - 159240 159150   91  0  1   20   90    95 0.520   1.55
 7.03 Intr - 161134 161009  126  1  0   71   61   118 0.756   7.36
 7.02 Intr - 161603 161369  235  1  1   68   76   233 0.709  16.87
 7.01 Init - 169614 169532   83  0  2   54  115    41 0.313   3.89
 7.00 Prom - 173373 173334   40                              -5.05

 8.00 Prom + 176737 176776   40                              -5.45
 8.01 Init + 177253 177262   10  0  1   91   98     5 0.801   2.46
 8.02 Intr + 180265 180471  207  2  0  114   89   156 0.965  16.43
 8.03 Intr + 182408 182544  137  0  2   36   86    78 0.466   1.77
 8.04 Term + 193448 193609  162  1  0  100   35    66 0.193  -0.55
 8.05 PlyA + 194541 194546    6                               1.05

 9.03 PlyA - 196331 196326    6                               1.05
 9.02 Term - 197110 196985  126  1  0   37   47    60 0.223  -5.90
 9.01 Intr - 200907 200629  279  0  0   10   41   242 0.612   8.45

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_1|71_aa
MARHNQVKCGDVIENSNEVEERSQSASLQTRDGLKHSLHKLSQLKKRLQFAENKSPECKY
NLLKAIQKAVD

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_1|216_bp
atggcccggcataaccaggtcaaatgtggggacgtgattgaaaacagcaatgaagtagaa
gagaggtctcaaagtgccagcctgcagacgagggatgggctcaaacactctcttcacaag
ctctcacagctgaagaagagactacaatttgctgaaaacaaaagcccagaatgtaagtac
aacctgctcaaggccatacagaaagcagtggactga

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_2|282_aa
MRQVCCSALPPPPLEKGRCSSYSDSSSSSSERSSSSSSSSSESGSSSRSSSNNSSISRPA
APPEPRPQQQPQPRSPAARRAAARSRAAAAGGMRRDPAPGFSMLLFGVSLACYSPSLKSV
QDQAYKAPVVVEGKVQGLVPAGGSSSNSTREPPASGRVALVKVLDKWPLRSGGLQREQVI
SVGSCVPLERNQRYIFFLEPTEQPLVFKTAFAPLDTNGKNLKKEVGKILCTDCDNVGFAL
LLCGVTASGPLVNGLPYIQSLSYRGHSITMSSFDHFVEGTVP

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_2|849_bp
atgcggcaggtttgctgctcagcgctgccgccgccgccactggagaagggtcggtgcagc
agctacagcgacagcagcagcagcagcagcgagaggagcagcagcagcagcagcagcagc
agcgagagcggcagcagcagcaggagcagcagcaacaacagcagcatctctcgtcccgct
gcgcccccagagccgcggccgcagcaacagccgcagccccgcagccccgcagcccggaga
gccgccgcccgttcgcgagccgcagccgccggcggcatgaggcgcgacccggcccccggc
ttctccatgctgctcttcggtgtgtcgctcgcctgctactcgcccagcctcaagtcagtg
caggaccaggcgtacaaggcacccgtggtggtggagggcaaggtacaggggctggtccca
gccggcggctccagctccaacagcacccgagagccgcccgcctcgggtcgggtggcgttg
gtaaaggtgctggacaagtggccgctccggagcggggggctgcagcgcgagcaggtgatc
agcgtgggctcctgtgtgccgctcgaaaggaaccagcgctacatctttttcctggagccc
acggaacagcccttagtctttaagacggcctttgcccccctcgataccaacggcaaaaat
ctcaagaaagaggtgggcaagatcctgtgcactgactgcgacaatgtgggctttgcgctt
ctcctgtgtggtgttacagcctcagggcctctggtgaatggtctgccttacatccagagc
ttgtcgtacagaggtcattcaatcaccatgtcttcttttgaccactttgtagagggtaca
gtcccttag

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_3|82_aa
MASLSWLAVCVGSQLEAQPGLPARVLGFPLYDEKPELMDNARLKALYKEIIIIIPDGTTQ
TEGLLPFSANWGVEAPRLQTQP

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_3|249_bp
atggcctcactctcatggctggcagtttgtgttggcagccagctggaagctcagccgggg
ctgccagccagagtccttggttttcctctatatgatgaaaaacctgagctgatggacaat
gcccgtctcaaagcactttacaaagaaataattattattatcccagatggaacaactcag
acagaggggctgctgcccttttcagcaaattggggagtggaagcccctcgactccaaaca
cagccatag

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_4|514_aa
MLISKRKEERDSKMKTLTKITRCTLKRRDARAKGASHGVGRRGGERGARADVAWSHARSA
GLRADVWLPRLAVCGGGGGGERIPQGKEEEEGEPRGLPRPPRVCPTATATVVVVVVVVVA
VVAAAAAAAAATLRVLLPLPHPARVISREWLTGCGGCGGSRRSRGGKAAAAEATEAAGGA
AGGGGAAAERSIMADRDSGSEQGGAALGSGGSLGHPGSGSGSGGGGGGGGGGGGSGGGGG
GAPGGLQHETQELASKRVDIQNKRFYLDVKQNAKGRFLKIAEVGAGGNKSRLTLSMSVAV
EFRDYLGDFIEHYAQLGPSQPPDLAQAQDEPRRALKSEFLVRENRKYYMDLKENQRGRFL
RIRQTVNRGPGLGSTQGQTIALPAQGLIEFRDALAKLIDDYGVEEEPAELPEGTSLTVDN
KRFFFDVGSNKYGVFMRVSEVKPTYRNSITVPYKVWAKFGHTFCKYSEEMKKIQEKQREK
RAACEQLHQQQQQQQEETAAATLLLQGEEEGEED

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_4|1545_bp
atgctgatttcaaagagaaaagaagaaagggacagcaaaatgaaaacactgacaaaaata
acaagatgcacactaaaacggagggacgcgagagcgaagggcgcgagccacggagttggg
aggaggggtggggaacgcggagcgcgcgctgacgtcgcctggagtcacgcacggagcgcc
gggttacgcgccgacgtctggctgccacgacttgccgtctgcggcggcggcggcggcggc
gagcggatcccgcaggggaaggaggaggaggagggagagccaagggggctgccgaggccg
cctagggtctgcccaacagcgacagccacggtggtggtggtggtggtggtggtggtagca
gtggtggcggcagcagcggcagcagcagctgcgacgctgcgcgtcctgctccctctcccc
cacccagccagggttatctcgcgagagtggctgactggctgtgggggttgcggcggcagc
aggcggagccggggagggaaagcagcggcggctgaggcgactgaggcggcgggcggagcg
gcaggcggcggcggcgcggcagcggagcgcagcatcatggcggaccgagacagcggcagc
gagcagggtggtgcggcgctgggttcgggcggctccctggggcaccccggctcgggctca
ggctccggcgggggcggtggtggcggcgggggcggcggcggcagtggcggcggcggcggc
ggggccccaggggggctgcagcacgagacgcaggagctggcctccaagcgggtggacatc
cagaacaagcgcttctacctggacgtgaagcagaacgccaagggccgcttcctgaagatc
gccgaggtgggcgcgggcggcaacaagagccgccttactctctccatgtcagtggccgtg
gagttccgcgactacctgggcgacttcatcgagcactacgcgcagctgggccccagccag
ccgccggacctggcccaggcgcaggacgagccgcgccgggcgctcaaaagcgagttcctg
gtgcgcgagaaccgcaagtactacatggatctcaaggagaaccagcgcggccgcttcctg
cgcatccgccagacggtcaaccgggggcctggcctgggctccacgcagggccagaccatt
gcgctgcccgcgcaggggctcatcgagttccgtgacgctctggccaagctcatcgacgac
tacggagtggaggaggagccggccgagctgcccgagggcacctccttgactgtggacaac
aagcgcttcttcttcgatgtgggctccaacaagtacggcgtgtttatgcgagtgagcgag
gtgaagcccacctatcgcaactccatcaccgtgccctacaaggtgtgggccaagttcgga
cacaccttctgcaagtactcggaggagatgaagaagattcaagagaagcagagggagaag
cgggctgcctgtgagcagcttcaccagcagcaacagcagcagcaggaggagaccgccgct
gccaccctgctactgcagggtgaggaagaaggggaagaagattga

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_5|155_aa
MPNGQLDSKRPRGEVLLKGYRRSIPDSQVGTTRQCWDSSIRCVIASVKAKRVRTKVVWLS
DQVSQKPESRKQEPNTGLKFSQRAECALRPGSSEARATMPDKHLTACPAGVVAGESHCSK
PSLWLLALNSQPLTFSTHHLSSPSPPYGSAHIASA

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_5|468_bp
atgcccaatggtcagttggacagcaagaggccccgaggtgaggtcctactgaagggctac
aggaggagcatcccagacagccaggtcggaactacacggcaatgctgggacagcagtatc
cgttgtgttattgccagtgtgaaagccaaaagggtcagaactaaagttgtgtggctgtca
gaccaggtgtcgcagaagccagaaagtaggaaacaggagcccaacacagggttgaagttc
tcccaaagggctgaatgtgctttaaggccaggctcctctgaggccagggccaccatgcct
gataagcacctcacagcttgtcctgctggtgtggttgcaggggagtcccattgctcaaag
ccctctttgtggttgctggctctaaacagtcagcccctaactttctcaactcatcatctc
agcagccccagtcctccctatggaagtgcccacatagccagtgcttga

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_6|539_aa
MAKHRQYRGTSNSSRKWHLDASTEAQPLALPLPRDSLYVESLWVQQHHSGHGCLSLAENG
KVLCLCSGEVTQTYCLRIRLCLKEAAFWILPQTLEAGLLRHRLLGPPGDRAWSTTFPEEV
TSGLGAEGGGRGAIQENPSLKATSPGECCDDPTGPQALPGPVKCSFVTGFCQFGDKEPET
QRVIPANKSDHGYSDVWDDDASQAVPGAAGAVTDANSEPWPRTLWLASRGRSARSAGEPS
SLPGPTNDDTRSLGLMQEDQMSCKGESPSPTSSPAPHPHLTRMQGVLASLQGGATPLPHQ
VAPEAGEEKTLGLQTTVWRILEDLEVPAAAWPGLSPTLAVLRKTHLGSKEQNFSVKTASH
QAERSPAVPRPGSRSLSSAASLLAAAPKDLLIFGPHQELTQRVHPHPEPEDAENGLRTAR
GCFGGVRGYSEKQSCVSLVPSLNSGVLQSQCPSTYGPPPLGLGAQSHREGLRVGLEVSAR
LVCGGGGKLLLPWPGLSGAQCRRARSPRSRRAPHSPPGGAGDTPGAVVAAAAAAAAAAE

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_6|1620_bp
atggcaaaacacaggcaatacagagggaccagcaacagctccaggaagtggcatctggat
gcttccacagaggcccagccactagctctacccctacctagggacagcctttatgtagag
tcactgtgggtccagcagcaccattcaggccatggatgtctttctctggctgagaatggg
aaggttctctgtctctgcagtggggaagtcacccaaacctattgcctccgtattagactc
tgcctgaaggaagccgctttctggatcctaccccagacgctggaggctgggctgctgcgg
catcgtctattaggtccaccaggggacagggcctggtctacgacattccctgaggaagtg
acttctggactgggagctgaaggaggaggaagaggagctatccaagaaaatccctccctt
aaagcaaccagccctggggaatgctgtgatgacccaaccggtcctcaggctcttcctggc
ccagtcaaatgctcctttgtcacaggattctgccagtttggagataaggaacctgagacc
cagagagtaatcccagctaacaaaagcgaccatggctactctgacgtgtgggacgacgat
gctagccaggccgtgccaggggctgctggtgctgttactgatgcaaattctgagccgtgg
ccacgcacactttggctggcctccaggggacggtcagctaggtccgctggggaaccttcc
tccctgcctggtcccactaatgatgacaccaggtccttgggcctgatgcaagaagatcag
atgtcctgcaagggagagtcaccatctcctacctcatccccggcaccccacccccacctt
accagaatgcaaggtgtcctggctagcctgcaaggtggggccacccctctgccccaccaa
gttgccccagaagctggagaggaaaaaactctgggtctccagacaacggtctggagaatc
cttgaggatctggaagtccccgctgctgcctggcctggtttatcaccaactctggcagtt
ttgagaaagactcacttgggttctaaggaacagaatttttctgtgaaaactgcatctcat
caagctgaaagatctccagcagtgccaaggccagggagcaggtctctgtcctcagctgcc
agcttgttggctgcagccccaaaagacctactgatatttggtcctcatcaagagctgacc
cagagagtccatcctcacccagagcccgaggacgcagagaacggcctgcgcaccgcccgc
ggctgcttcggaggggtgagggggtacagcgagaaacagagctgcgtctccctcgtcccc
tccttaaattccggcgtcctccagtcacagtgtcccagcacctacggccccccaccccta
ggcctgggcgcacagagccaccgagagggcttgagggtggggctggaagtctctgcccgg
ctggtctgcggcggcggagggaagttgcttcttccctggccgggcctctccggagcgcag
tgccggcgcgcccggagtccgaggagccggcgggcaccccattcgccccctggcggcgcc
ggggacacgccgggagccgttgtagccgccgcagccgcagccgccgccgcggcggaatga

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_7|307_aa
MYGPLQKLEDCLDAVFPSAFSLWKGPHSYFQSLVTSAPLPPAGLATCPLPPAGPARNRQS
SASEIAAQGEEIQKPPADVPRDGVWRAPLRARRLLVRREPQRRGDPLGRARSAAPHLSSP
RTDWITVGSEPEEPGPARSRLAAPVSEQRLLEKSSIVCLPLKSEGDPCTPQTTSGPSEAF
MERGAMPAALAKEKVQVKRQIYGPIMAPSLISVAPWTGDQESFFCMMTRATPLQFFSCSS
GDTHYLCSQCIQVLILDATFDSLSCFSHSPDESVLVLPPPLPSLEGRESRERACLQVNSG
HDPREQE

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_7|924_bp
atgtatggtcctctgcaaaagctagaggactgcctggatgcagtattcccctctgcattc
agcttatggaagggtccccacagttacttccagtcactagttacttccgctccgctccca
cccgcgggactcgcgacctgccccctgcccccggctggcccagctcggaataggcagagc
agcgcctcagaaatcgcagcccaaggcgaagaaatccagaagcctcccgcggacgtcccc
cgggacggggtgtggcgagccccgctccgagcccgccgactcctcgtgagacgagaaccg
cagcgacgcggagaccctctgggtcgggccaggtccgctgcacctcacctctcctctcca
cgaaccgactggataacggtcgggtctgaacctgaggagcccggaccagcccgcagtaga
cttgccgcacctgtctcagagcaaaggctgttggagaagagcagcattgtctgtttgcct
ctgaagagtgaaggtgatccatgcacaccccaaactacctctggaccatctgaggcgttc
atggaaagaggggccatgccagctgcattggctaaggagaaggtacaggttaaaagacag
atctatggtccgatcatggccccatctcttatttctgtggctccttggactggtgatcag
gagtcatttttctgcatgatgaccagggccactccactgcaattctttagctgcagcagt
ggagacacacactacctttgttcccagtgcatccaggtccttattttagatgctaccttc
gattctctgagctgcttcagccacagtccagatgagagtgtgcttgtcctgccccctccc
ctccccagcctggaaggtagagaaagcagagaaagagcatgcttgcaagttaattcagga
catgatcccagggagcaggaatag

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_8|171_aa
MMRGALYRSPMNQENPPPYPGPGPTAPYPPYPPQPMGPGPMGGPYPPPQGYPYQGYPQYG
WQGGPQEPPKTTVFIMHARKRAGSITSIIGVVGIQACDIRETFSENKPQLLGFLLQNKTS
IPKNLGAFHGLALLLGSVSVSQHHQAPSFHMAFANATSSVWLGKFFAPLLA

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_8|516_bp
atgatgaggggtgcactttacaggtccccgatgaaccaagagaaccctccaccatatcca
ggccctggtccaacggccccatacccaccttatccaccacaaccaatgggtccaggacct
atggggggaccctacccacctcctcaagggtacccctaccaaggatacccacagtacggc
tggcagggtggacctcaggagcctcctaaaaccacagtttttatcatgcatgctcggaag
agggcaggaagtataaccagtataatcggagtagttggtattcaggcctgtgacatcaga
gaaacattttctgaaaataaacctcagcttctgggttttctgcttcaaaataagaccagc
attccaaaaaacttaggggcctttcatggtctggccctgctactaggttcagtttcagtt
tctcagcatcatcaggctccctccttccacatggcttttgcaaatgccacttcctctgtg
tggcttgggaaattctttgctcctctcttggcttag

>gi568815593f:140014182_140215147|GENSCAN_predicted_peptide_9|134_aa
FPLWLTTLTTGKIALGAYGHCATQAAGVVRDIPPYAQALEPGPFLYRNGSLLLGRIYPRG
RSVSPRMVPTPMTYSTGLALQSAADIGRSRQCLLCDHEQVSLSMLQFLHLYDGDKKTYLA
GLFLGLDELIYKSA

>gi568815593f:140014182_140215147|GENSCAN_predicted_CDS_9|405_bp
tttcccctgtggctaaccacactgaccactgggaagattgcactaggtgcctacgggcac
tgtgccacacaggcagctggtgtggtaagagacataccaccctatgcacaggccctggag
cctgggccctttctgtacaggaatggctcattactactgggaagaatatatcctagggga
agatccgtgtcacctcggatggtccccacaccaatgacctacagcactggacttgctctg
cagagtgcagctgacatagggaggtcccgacaatgcctgctctgtgaccatgaacaagtt
agcctttccatgcttcagtttcttcatctatatgatggagataagaagacctaccttgca
ggattgttcttaggactagatgagctaatatacaaaagtgcttga