GENSCAN 1.0	Date run:  6-Nov-116	Time: 10:58:19

Sequence gi568815593f:139500370_139726798 : 226429 bp : 49.64% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   1135   1137    3  0  0  108   81     0 0.461   1.30
 1.02 Intr +   3251   3444  194  1  2    0   89   135 0.504   3.09
 1.03 Intr +   4401   4438   38  0  2   65   87    18 0.172  -2.69
 1.04 Intr +   7884   8072  189  1  0   90   80    61 0.608   5.06
 1.05 Term +  10582  10730  149  2  2  101   55    37 0.296  -0.24
 1.06 PlyA +  11473  11478    6                               1.05

 2.00 Prom +  17005  17044   40                              -6.66
 2.01 Sngl +  17682  18161  480  2  0   83   37   207 0.907  11.32
 2.02 PlyA +  19664  19669    6                               1.05

 3.06 PlyA -  23043  23038    6                               1.05
 3.05 Term -  23236  23154   83  2  2  111   37    14 0.219  -3.54
 3.04 Intr -  23415  23292  124  0  1  100   53    76 0.384   5.46
 3.03 Intr -  43282  43157  126  1  0   33   74   102 0.370   4.18
 3.02 Intr -  61235  60936  300  2  0   58   52   147 0.424   5.03
 3.01 Init -  61844  61422  423  2  0   79   44   329 0.982  21.95
 3.00 Prom -  91208  91169   40                              -3.46

 4.00 Prom +  93968  94007   40                              -4.96
 4.01 Init +  95196  95244   49  2  1   89   99    63 0.901   6.61
 4.02 Intr + 122999 123092   94  0  1   99  106    32 0.060   5.12
 4.03 Term + 126387 126432   46  0  1   85   32    41 0.029  -5.12
 4.04 PlyA + 126461 126466    6                               1.05

 5.10 PlyA - 126895 126890    6                               1.05
 5.09 Term - 129355 129346   10  0  1  142   32    -3 0.070  -2.83
 5.08 Intr - 135215 135081  135  1  0   93  116     5 0.077   3.48
 5.07 Intr - 138006 137810  197  0  2   79   65   123 0.243   7.31
 5.06 Intr - 140811 140641  171  0  0   71   80    31 0.129   0.74
 5.05 Intr - 142958 142892   67  1  1  112   85     4 0.159   1.41
 5.04 Intr - 147599 147541   59  2  2   91   85    43 0.237   1.98
 5.03 Intr - 154765 154551  215  2  2   90   41    79 0.169   1.83
 5.02 Intr - 157079 156951  129  0  0   65   56    57 0.161   0.87
 5.01 Init - 160727 160505  223  2  1   86   55   149 0.231   8.12
 5.00 Prom - 166983 166944   40                              -4.56

 6.00 Prom + 175435 175474   40                              -2.46
 6.01 Init + 180155 181078  924  1  0   96   82  1198 0.832 113.93
 6.02 Intr + 184959 185063  105  2  0   70  103    44 0.663   4.51
 6.03 Intr + 185700 185768   69  2  0  104   80    36 0.884   3.78
 6.04 Intr + 188398 188496   99  0  0   62   41    72 0.503   0.21
 6.05 Intr + 189294 189502  209  2  2   99   48    94 0.268   4.38
 6.06 Intr + 197039 197171  133  2  1   62   44    58 0.086  -0.55
 6.07 Intr + 205310 205331   22  1  1  125   61    22 0.166   0.32
 6.08 Intr + 210872 211039  168  0  0   76   85   104 0.385   8.82
 6.09 Intr + 211663 211762  100  2  1   41   23   113 0.103  -0.73
 6.10 Term + 220180 220417  238  1  1   25   43   170 0.374   1.84
 6.11 PlyA + 222178 222183    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init - 171319 171105  215  1  2   85   23   212 0.803  10.64


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:139500370_139726798|GENSCAN_predicted_peptide_1|190_aa
MKEETPDISEHLKEQTLDTPSLRTVTLTVRVCGFILEVSETKNPPEGTNSRHILSTQMGL
SPIAKWRTGNGAGFQECIEDGEPIKHDCQQIIVQTYAARADLLEVPLANPDLNLYTNGSS
FVENGIRRAGYAIVSDVTVLESPMAAILLLLAFRPCIFNLVKFVSSRIEAIKLQMVLQME
PQMSSNNNFY

>gi568815593f:139500370_139726798|GENSCAN_predicted_CDS_1|573_bp
atgaaggaagaaactccggacatatctgaacatctgaaggaacaaactctggacacacca
tctttaagaactgtaacactcaccgtgagggtctgcggcttcattcttgaagtcagtgag
accaagaacccaccagaaggaaccaattccagacacattttgtctacccagatgggacta
tcgcctatcgccaagtggaggacaggcaacggtgcaggttttcaagaatgcattgaggat
ggggaaccaatcaagcatgactgccaacaaattatagtccagacttatgccgcccgagct
gatctcttagaagtccccttagctaatcctgaccttaacctatataccaatggaagttca
tttgtggagaatgggatacgaagggcaggttatgccatagttagtgatgtaactgtactt
gaaagtcccatggcagccatcttgctattactcgccttcaggccctgtatttttaacctt
gtcaaatttgtttcctctaggatcgaagccatcaagctacagatggtcttacaaatggaa
ccccaaatgagctcaaataacaacttctactga

>gi568815593f:139500370_139726798|GENSCAN_predicted_peptide_2|159_aa
MPPAGDFIRPGAKARPPLEGAALSSRAARMDSRQSRTREAGGGCSVRLPRLSGGRSCLGP
GTTGWRLWLTSPRLCPLLPGARVRNLCFTLESAAILPLNQTGMASGCPSCLLIVSEPFPD
PYPLSDQQDDDRKRIQDQLLAVTLRKQSHTPVSLTMQWK

>gi568815593f:139500370_139726798|GENSCAN_predicted_CDS_2|480_bp
atgcctccggccggtgacttcatccggcccggggccaaggcccggcctccgctagagggc
gctgctctcagcagccgcgccgcccggatggactcgcgccagagtaggacaagagaggca
ggcggcggctgctccgtgcggctcccacgcctctcgggcggcaggtcctgcctcggacct
gggaccactggctggcgcctgtggctcacatctccacgcctttgcccgctcctcccagga
gcccgagtcagaaacctgtgcttcaccctcgagagcgctgccatcctccccctcaaccag
acgggcatggcgtctggttgtccgtcctgtcttctcatcgtctcagagcccttccctgac
ccctaccctctctcagaccaacaggatgatgacaggaagaggatccaggaccaactccta
gcggtgaccttgagaaaacaatctcataccccagtttcccttacaatgcaatggaaataa

>gi568815593f:139500370_139726798|GENSCAN_predicted_peptide_3|351_aa
MGREALSTSVEGAAQRPSAPLGPNPAILARQWPSSAAAVPDWREALRVHTMRAWKGSRGG
TLRPREHLRPKRGLRAGASTGAITGSGVWRPPRGASTGSKIQGGREPDGDYGGKCRPQPA
QLASSAADLRPLTLWILFRAMRSPHHPAAAPLFAAALAATAAAAVAASSSQDQRRLLNRR
RSLRQKAKAQASGSAGLSWSDSRRDCLSSSLLQVDRGTRGRAGCAAGVGPSEHGVGPTEG
QAGFERPESLVRKLPLQPGPSLAARGSVRSPVSSPGQLAPSGGVPLLATPPRDQRLLVLR
KGSVHAFLIPGSAAGPGQNVALREGWPGLVDLGNPTSGAEGGTKSSGSSTC

>gi568815593f:139500370_139726798|GENSCAN_predicted_CDS_3|1056_bp
atggggcgagaagccctttcgacctctgtcgaaggggccgcccaacgccccagcgccccc
ctcggccccaaccccgccatcctggcccgacaatggccctcaagtgcagcggcagtccca
gactggagagaagccctaagagtccacaccatgcgggcctggaagggcagccggggagga
acgctgaggccgcgagagcacctccggcctaagcgcgggctgcgcgccggggcctccacg
ggcgccatcactgggagtggggtatggaggccgccccgaggggccagcaccggcagcaag
atccaaggaggccgcgagcccgacggagactacggcgggaagtgcaggccgcagcctgct
cagctggccagcagcgcagccgacctccggccgcttaccttgtggattctcttcagagcc
atgcggtcaccgcatcacccggcggcggcccctttattcgccgccgccctagccgccacc
gccgccgccgccgtagctgcctcttcctcccaggatcagcgccgcctcctaaaccgccgc
agatccctccgccagaaagcaaaagcccaagcctcgggctcggccggcctctcttggtcg
gacagccggagggattgcctgtcttcctccctgctgcaggtggaccgagggacgcgcggg
cgggcgggctgcgccgccggggtggggccgtcggagcacggggtgggcccgaccgagggg
caggctggttttgagaggcccgagtcgctagtgagaaagctgcctctgcagccaggcccc
tccctggcggcccgaggctccgtccggtcccccgtgtcgtcgccggggcagctggcgccc
tccggcggggtgccgctgctagccaccccacctagagatcaaaggttactagtgctgaga
aagggctccgtccacgccttcctcatcccagggtcagctgctggccctggccagaatgtg
gctcttcgagaagggtggccaggtctggtcgacctaggcaacccaaccagcggggctgag
ggtggaacaaaaagctctggctcctccacttgctag

>gi568815593f:139500370_139726798|GENSCAN_predicted_peptide_4|62_aa
MGFRHVGQAGLELLTSVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNRIAREWTQKY
AM

>gi568815593f:139500370_139726798|GENSCAN_predicted_CDS_4|189_bp
atggggtttcgccatgttggccaggctggtctcgaactcctgacctcagtactcttgtcc
atctgttctctgttgtgtgatcccaatccagatgatcctttagtgcctgagattgctcgg
atctacaaaacagatagagaaaagtacaacagaatagctcgggaatggactcagaagtat
gcgatgtaa

>gi568815593f:139500370_139726798|GENSCAN_predicted_peptide_5|401_aa
MGKSMRAEVGEAVLVPQTPAALAPSAQAAAPGFLFHRNLSWEKPIGSSCLSRRPPGPGKL
PLRGQARSLASQPVAYQPISQHIQPIAKGYGGLKEERARPVPSKHLRSPFCVPDSVEGLI
WVQPAFQSCQPPYQESQEACQHSRCHGTSWGRSGRHPASPSQEKSAKPPLSTETCGEGRL
GLTAQLSQQSGARSFEDREGEFGRAPQLRLQGMGCSDSAWGWARDELLFELGLVPVGAKC
LGKASGCGWTKSVPCRGEGHRKKRDGPGPAVGALVATPGFLSLDPSAWTAAQSHVSTSNR
GVWKLAQAPEREGDRGLRVLRRDGFQRVTHSAEQGMGRHDLGPSFYEPQFPVLGAGKQLG
EIWPPSTAYPSSVAGGKSSPNPRLLFTRQDNWIPFCPPRPS

>gi568815593f:139500370_139726798|GENSCAN_predicted_CDS_5|1206_bp
atggggaagagcatgagggcggaggtgggggaggctgtcctggtcccccagactccggct
gccctggccccctcggcccaggctgcagctccggggttcctgtttcatcgaaacctgagc
tgggaaaagcctatcgggtcatcttgcctgtcccgccggccaccaggcccaggcaagctg
cccctcaggggacaggcccgcagcctggcctcccagccagtggcctatcagcccatctcc
caacacatccagcccattgccaagggttatgggggcctcaaagaggaaagagcaaggcct
gtgcccagcaagcatttaaggagtcccttctgtgtgccagatagtgtggaagggctgatc
tgggtacagccggccttccagagctgccagccaccctatcaagaaagccaggaggcctgt
caacacagccgctgccacggcacctcctggggaaggagcgggagacatccagcttctcct
tcccaggaaaaatcagccaagccaccactttccacagagacctgtggggagggacggctg
ggcctcacagctcagctgagccagcagagcggggccagaagcttcgaggaccgggaggga
gaatttggccgcgccccccagctcagactccaaggaatggggtgctcagacagtgcttgg
gggtgggcccgggatgaactgctctttgaactgggcctggtcccagttggtgctaaatgt
ttagggaaggcatcgggatgtggctggaccaagtctgttccatgtcggggggaagggcac
aggaaaaagagagatggaccagggcctgctgtgggggctctagtggccacacctggattc
ctttccttagatccatctgcctggacagctgcccagagccacgtcagcacttccaaccgg
ggagtctggaaactggctcaggcccctgagcgagaaggggacagggggctgcgggtcctc
cgacgggatggttttcagagggtgacccactcagctgagcagggaatgggtcggcatgac
cttgggccgagcttctatgaacctcagtttcccgtgctcggagctgggaaacagctgggg
gagatctggcctccttccacagcatacccctcctccgtggctggaggcaaatcctccccc
aaccccaggcttttattcaccaggcaggacaactggattcccttttgtcccccaagacct
tcctaa

>gi568815593f:139500370_139726798|GENSCAN_predicted_peptide_6|688_aa
MSSLGGGSQDAGGSSSSSTNGSGGSGSSGPKAGAADKSAVVAAAAPASVADDTPPPERRN
KSGIISEPLNKSLRRSRPLSHYSSFGSSGGSGGGSMMGGESADKATAAAAAASLLANGHD
LAAAMAVDKSNPTSKHKSGAVASLLSKAERATELAAEGQLTLQQFAQSTEMLKRVVQEHL
PLMSEAGAGLPDMEAVAGAEALNGQSDFPYLGAFPINPGLFIMTPAGVFLAESALHMAGL
AEYPMQGELASAISSGKKKRKRCGMCAPCRRRINCEQCSSCRNRKTGHQICKFRKCEELK
KKPSAALECANPQPSVSPEPTPQHTAETQSSSPVPASHCFVEMVPSPLLCYSWETDFLVT
QEPFLQPITTLVILGDITWPQGYGLQLSKGSAGTQHMEGAPSPSSSFEACPGGAPPVAVL
ALQQWVHRQLLGVLGSGCKGEGEQWPLPLIRRRKPQERGRSEAMETRLRLSLALRLSEGR
GRIGTSGGAAASPAASDPTPSGPPLLPDLWAWLTKQPNQKGARSPARAGAPGAGGRSHLQ
LWRNESGAAAAAAAAAERVWHPESPGIENNLGKAVGGRNVTAAALSTLGGNSVWSEELAL
SPAKLPAAGGPQNGRSTNSLHHAPGKAADTQRQPVKAARREAVPCKMTGVELPKTMGTYL
LHQRDLDVRPGVKGDHFGALKFDCPAGF

>gi568815593f:139500370_139726798|GENSCAN_predicted_CDS_6|2067_bp
atgtcgagcctcggcggtggctcccaggatgccggcggcagtagcagcagcagcaccaat
ggcagcggtggcagtggcagcagtggcccaaaggcaggagcagcagacaagagtgcagtg
gtggctgccgccgcaccagcctcagtggcagatgacacaccaccccccgagcgtcggaac
aagagcggtatcatcagtgagcccctcaacaagagcctgcgccgctcccgcccgctctcc
cactactcttcttttggcagcagtggtggtagtggcggtggcagcatgatgggcggagag
tctgctgacaaggccactgcggctgcagccgctgcctccctgttggccaatgggcatgac
ctggcggcggccatggcggtggacaaaagcaaccctacctcaaagcacaaaagtggtgct
gtggccagcctgctgagcaaggcagagcgggccacggagctggcagccgagggacagctg
acgctgcagcagtttgcgcagtccacagagatgctgaagcgcgtggtgcaggagcatctc
ccgctgatgagcgaggcgggtgctggcctgcctgacatggaggctgtggcaggtgccgaa
gccctcaatggccagtccgacttcccctacctgggcgctttccccatcaacccaggcctc
ttcattatgaccccggcaggtgtgttcctggccgagagcgcgctgcacatggcgggcctg
gctgagtaccccatgcagggagagctggcctctgccatcagctccggcaagaagaagcgg
aaacgctgcggcatgtgcgcgccctgccggcggcgcatcaactgcgagcagtgcagcagt
tgtaggaatcgaaagactggccatcagatttgcaaattcagaaaatgtgaggaactcaaa
aagaagccttccgctgctctggagtgtgccaacccacagcccagcgtgtctcctgagccc
actccccagcacacggccgaaactcagagctcctcacctgttccagcttcacactgcttt
gtggaaatggtgccctcacctctcctctgctacagttgggaaactgacttcctggtgacc
caggagcctttcctccagcccatcacaacactggtcattcttggtgacatcacctggcct
cagggctatggtctgcagctcagtaagggcagcgctggcacccaacacatggaaggggct
cccagcccctcttccagctttgaggcctgcccgggaggggcaccccctgtggctgttttg
gctctgcagcagtgggtccacaggcagctgctgggagtcttggggagcggctgcaagggt
gagggcgagcagtggccgctgccgttgataaggcgacggaagcctcaggagcgaggacgc
agtgaagccatggaaacacggctgaggctttccctcgcgctgcggctgtcggagggccgc
ggccggatagggacaagcggcggagcagcagcaagtccggccgcctccgatcctacgcct
tctggccctcccctccttcccgacctctgggcctggctgacaaagcagcccaatcagaag
ggcgcgcgcagcccagcgcgggccggggcaccgggcgcaggcgggaggtcgcatctgcag
ctttggcgcaatgaatcaggcgcggccgccgccgccgccgccgccgccgagcgcgtctgg
catccggagtctcccgggatcgaaaataatttgggcaaagcggtgggaggcagaaatgtc
actgccgctgcattaagcacgctcggcgggaactcggtttggagcgaggagctggcgctc
agccctgccaagctgcctgccgcagggggaccccagaatggtagatccaccaacagcttg
caccatgcacctggaaaagctgcagacactcaacgccagcccgtgaaagcagccaggagg
gaggctgtaccctgcaaaatgacaggggtagagctgcccaagaccatgggaacctacctc
ttgcatcagcgtgacctggatgtgagacctggagtcaaaggagatcattttggagcttta
aaatttgactgccccgctggattttga