GENSCAN 1.0	Date run:  4-Nov-116	Time: 19:49:15

Sequence gi568815592r:77362234_77563403 : 201170 bp : 36.63% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 Intr -    377    285   93  1  0   70   84    89 0.009   4.86
 1.07 Intr -   1646   1508  139  0  1   35   94    37 0.009  -2.40
 1.06 Intr -   6815   6653  163  2  1   49   98   214 0.049  17.13
 1.05 Intr -  21364  21140  225  1  0   58   82    92 0.023   2.86
 1.04 Intr -  29052  28955   98  1  2   16   85    99 0.002   1.21
 1.03 Intr -  56122  56031   92  0  2   68  100    82 0.231   6.12
 1.02 Intr -  69705  69611   95  0  2   45   95    43 0.055  -1.46
 1.01 Init -  70037  69867  171  2  0   56  105    79 0.149   5.89
 1.00 Prom -  94002  93963   40                              -2.95

 2.09 PlyA -  95031  95026    6                               1.05
 2.08 Term - 101202  99998 1205  1  2   44   38  1276 0.955 109.04
 2.07 Intr - 101983 101584  400  1  1   73   66   220 0.396  11.45
 2.06 Intr - 102834 102745   90  0  0  103    9    74 0.382   0.27
 2.05 Intr - 145607 145466  142  1  1   47   75    81 0.412   2.13
 2.04 Intr - 146281 146089  193  2  1   94   30   100 0.450   2.43
 2.03 Intr - 147032 146758  275  1  2   -8   52   235 0.298   6.56
 2.02 Intr - 147928 147504  425  1  2   38  -32   298 0.437   4.54
 2.01 Init - 148309 148136  174  1  0  101   71   155 0.845  14.64
 2.00 Prom - 149327 149288   40                              -8.35

 3.00 Prom + 154334 154373   40                              -5.75
 3.01 Init + 155969 156045   77  1  2   55   98   -31 0.768  -4.78
 3.02 Intr + 156752 157209  458  2  2  108   71   276 0.080  19.84
 3.03 Intr + 159533 159763  231  0  0   31   72   107 0.008   0.22
 3.04 Intr + 182603 182760  158  0  2   50   77   149 0.231   8.81
 3.05 Intr + 199098 199206  109  2  1   81   86    91 0.478   7.14
 3.06 Intr + 199445 199575  131  0  2   46   77   104 0.421   4.59

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +    228    326   99  2  0   58   69   107 0.904   6.11
S.002 Intr +   4649   4703   55  1  1  114  102    51 0.828   6.73
S.003 Intr + 114044 114107   64  1  1  128   86    44 0.827   5.57
S.004 Sngl + 159918 160364  447  2  0   39   42   201 0.817   6.57
S.005 Init + 162029 162111   83  1  2   83   27    77 0.883   1.59
S.006 Term + 164772 164988  217  0  1   89   53   111 0.840   3.33


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:77362234_77563403|GENSCAN_predicted_peptide_1|359_aa
MVTSYGRRILQLLSFSFQPWASTKFSEKQTPRRRWPFPGNGQVCHYPATLRPVIRPEGLM
VRSRTPTDVHLWHRIVGKSFTIPKSLKLLPPATLSQQVMLRGDVANSGFPLMVVTEEWEA
SLQGEEKVECTSHTPTSAAAFQDTGFYHTTLKWLYYFYISTNSGNSPFPHQQEVARKNTP
PGPFYNYRDGFTEQERGASPSWTSAAILKFTLIKNCLNPKGISLMAKALEGTHAQVAGLR
EEFIGEEDASGWSWRGLFDERRQKSTAKKSQDTESPLYLQQDPFKAGSLWVIQQMGCNNI
SKCAICYLENGKSFTKYCIFYFELEFARMLPVALLPSAPPQDAATCILVTLALSADDSS

>gi568815592r:77362234_77563403|GENSCAN_predicted_CDS_1|1077_bp
atggtaacttcatatggaagaagaattcttcagcttctcagtttctccttccagccatgg
gcttcgacaaagttctcagagaaacagactcccagacgacgctggccattccctggcaac
ggccaggtttgccattatccagccactctgagacctgttatcaggcctgagggcctgatg
gtcaggtccaggactcctacagatgtgcatctgtggcacaggattgtgggcaaaagcttc
acaatacccaaatcccttaagctcctgcctcctgcaacactttcccagcaggtaatgtta
cgaggtgatgttgcaaattcaggctttccactgatggtagtgacggaggagtgggaagct
tctctgcaaggagaggagaaagtggaatgcacatcccataccccaacgtctgcagctgca
tttcaagatactggcttctatcacactacactcaagtggctatactatttttacatttcc
accaacagtggaaactctccattccctcatcagcaggaagtagccagaaagaacacgccc
cctggtcctttttataactatagggatggatttacagagcaggagcgaggagcgtcacca
tcttggacaagcgctgccattttaaagttcaccttgatcaaaaactgcctaaatccaaag
ggcatcagcctaatggctaaggccctagaaggcacacacgcacaagtggctggacttcgt
gaggaattcataggggaagaagatgcaagtggctggtcatggagaggactttttgacgag
cgccggcaaaagagcacagcgaagaaatcccaggatacggaaagccctctgtacttgcaa
caagacccattcaaagctggcagcctttgggtcattcaacaaatgggttgtaacaacata
tccaaatgtgccatttgttatcttgaaaatggaaagagtttcaccaaatactgtatcttc
tactttgagttagaatttgcaaggatgctgcctgtagctctgttgccctctgcaccacct
caggatgctgctacctgcatcctggtcacattggctctatctgcagatgactccagn

>gi568815592r:77362234_77563403|GENSCAN_predicted_peptide_2|967_aa
MTLFRMWQGPLEIGLPLEMKVTGFRTISQVVFKPLAPAAQTAITAQELQVILEIEGRKRE
LTHMGASILMAPGQSLCLPLVEANINPEVWAAQGRIGRAVTTRLVQIHLKDPTIFPNQKQ
YPLKQDARKGPEAIINNLKMQGLLKRCKSPCNTPILTVQNQRGMETFQDLHLINEFINPI
YLVVPNPYTLLTEIPEGTKWILQAMETWYSEIAHPLYHLIRETQAAKTHILTWETEAQKA
FKQLKQALLKAIALSLPVGRAFNLYVSERKGMALGVLMQAQGPAQQPVGYLSTSAQLAEL
RALTRALELSKGKVANIYNDAKYAFLVLHTHAAIWKERHFPTTNGSAIKYPQEFNRMGSY
PGEDWQIDFTHMPKMKHPIPPVWVDTFINWVEAFPCCTEKASEVGCWKEHAYWQLFSRGT
EALSSWKRMVEQKCAAPGPPDPRTQWHGSEWLPWDQGGGGGGAARAAATPAPVSPLLWLR
LRGAARPSGQRVKREGGQSSGARRGAALLLDFTPPSSGGRCSPPKVPQLGARGGNARSRD
LSLACKLWSLHLGNSCGQSLQIQKRPELRSGAGARRAMEEPGAQCAPPPPAGSETWVPQA
NLSSAPSQNCSAKDYIYQDSISLPWKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTP
ANYLIASLAVTDLLVSILVMPISTMYTVTGRWTLGQVVCDFWLSSDITCCTASILHLCVI
ALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFSISISLPPFFWRQAKAEEEVSECVVNT
DHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILKQTPNRTGKRLTRAQLITDSPGS
TSSVTSINSRVPDVPSESGSPVYVNQVKVRVSDALLEKKKLMAARERKATKTLGIILGAF
IVCWLPFFIISLVMPICKDACWFHLAIFDFFTWLGYLNSLINPIIYTMSNEDFKQAFHKL
IRFKCTS

>gi568815592r:77362234_77563403|GENSCAN_predicted_CDS_2|2904_bp
atgaccctgttcagaatgtggcagggaccactggaaatcggactgcccctggagatgaag
gtgactgggttcagaacaatctcacaggtggtgttcaaacccctggctccagcagctcaa
actgccattacagcacaggagctccaggtgattctggaaattgaaggaagaaagagagag
ttaactcacatgggggccagcatccttatggccccaggacaatctctttgtcttcccctg
gtggaagctaatatcaatccagaagtgtgggcagctcaaggaagaataggtcgagctgta
accactagactagtccagatccatcttaaggatcccaccatttttcctaaccagaaacaa
tatcccctgaagcaagatgctaggaaagggccagaagctattattaataacctgaagatg
cagggcctcctcaaacgctgtaagagcccctgcaacactccaatattaacagtgcaaaac
caacggggaatggagacttttcaggacctccacctcattaatgagttcataaacccaatc
tatctggtagtacctaatccctataccttgctgaccgaaatacctgagggaactaaatgg
attttgcaggctatggaaacctggtacagtgagatagctcatcctctatatcacctcata
agagaaactcaagcagctaaaactcatatcctaacctgggaaactgaagctcaaaaggcc
tttaagcagctaaagcaggccctacttaaggcaatagctctcagccttcccgttggaaga
gccttcaatctgtatgtatcagaaaggaagggaatggccctgggagtcttaatgcaggcc
caaggaccagctcaacaaccagtgggttatctgagcacaagcgctcaactagctgaactg
agagctcttacaagagcacttgagttaagcaagggaaaggtagctaacatttacaatgat
gccaagtatgctttcttggttctccatactcatgctgccatttggaaggaaagacacttt
cctaccaccaatggatctgctataaaataccctcaggaatttaacaggatgggaagctat
ccaggggaggactggcagatagactttacccacatgccaaagatgaagcatccaatacct
cctgtatgggtagatacttttattaactgggtagaagcatttccatgctgtacagaaaag
gcctctgaggtaggctgttggaaggaacacgcttactggcaactgttttccagaggcact
gaagcactgagcagctggaagaggatggtggagcagaagtgtgccgcgccaggtcctcca
gacccgcgcacccagtggcatggctccgagtggctcccgtgggaccagggtggcggtggc
ggcggcgcggcccgagcagccgcaactccagcccccgtgtccccccttttatggctccgt
ctccgcggggcagctcgtccgagtggccagagagtgaaaagagagggagggcagagctcc
ggcgcgaggcgcggcgcagcgctgctcctagacttcaccccacccagctctggcggccgc
tgcagccccccaaaagtgccccagcttggggcgaggggtgggaatgcaagatctcgggac
ctctcgctggcctgcaagctttggtctctacacctaggaaactcctgtgggcaaagtctg
cagatccaaaagcgtccagagctgcgctccggagctggggcgaggagagccatggaggaa
ccgggtgctcagtgcgctccaccgccgcccgcgggctccgagacctgggttcctcaagcc
aacttatcctctgctccctcccaaaactgcagcgccaaggactacatttaccaggactcc
atctccctaccctggaaagtactgctggttatgctattggcgctcatcaccttggccacc
acgctctccaatgcctttgtgattgccacagtgtaccggacccggaaactgcacaccccg
gctaactacctgatcgcctctctggcggtcaccgacctgcttgtgtccatcctggtgatg
cccatcagcaccatgtacactgtcaccggccgctggacactgggccaggtggtctgtgac
ttctggctgtcgtcggacatcacttgttgcactgcctccatcctgcacctctgtgtcatc
gccctggaccgctactgggccatcacggacgccgtggagtactcagctaaaaggactccc
aagagggcggcggtcatgatcgcgctggtgtgggtcttctccatctctatctcgctgccg
cccttcttctggcgtcaggctaaggccgaagaggaggtgtcggaatgcgtggtgaacacc
gaccacatcctctacacggtctactccacggtgggtgctttctacttccccaccctgctc
ctcatcgccctctatggccgcatctacgtagaagcccgctcccggattttgaaacagacg
cccaacaggaccggcaagcgcttgacccgagcccagctgataaccgactcccccgggtcc
acgtcctcggtcacctctattaactcgcgggttcccgacgtgcccagcgaatccggatct
cctgtgtatgtgaaccaagtcaaagtgcgagtctccgacgccctgctggaaaagaagaaa
ctcatggccgctagggagcgcaaagccaccaagaccctagggatcattttgggagccttt
attgtgtgttggctacccttcttcatcatctccctagtgatgcctatctgcaaagatgcc
tgctggttccacctagccatctttgacttcttcacatggctgggctatctcaactccctc
atcaaccccataatctataccatgtccaatgaggactttaaacaagcattccataaactg
atacgttttaagtgcacaagttga

>gi568815592r:77362234_77563403|GENSCAN_predicted_peptide_3|388_aa
MTWIPWQDGRIGTAPVCSSQRDQCRRTSLKERQQPQSAAYRQNFHLPGDEKRAPGGRGSC
GCSFSRLKRSCLPSLKRAADLPAQYSSSAKGQTASSSWSLIPVHPDRKTPPNRGQQSPYT
GKLWLASGRCPSGTKLPEEGASSSLCCSAAFATAVASTSTKRRPCKNSIERSPTAKTKEI
QTTIREYYQHLYANKPESLEEMHKFLEIYTLPRLNQEKVNTLNRPITISEIDTAVNNLPT
KKAQDQLDSQPNFARETEQGEVKGGKVAKRKGKTGSFDNHNELEDVLVNVDAKDAGLRMT
DQSSGLQDHPTNWKQVEHIEELGLTTAICNDIKVKEKMKVPSSKVSEDDIWVCEQELGVT
AWCQRENGPCQNAASQVYTASERVGFPK

>gi568815592r:77362234_77563403|GENSCAN_predicted_CDS_3|1164_bp
atgacatggattccctggcaagatggccgaataggaacagctccagtctgcagctcccag
cgagaccaatgcagaaggacatctctgaaagaaaggcagcagccccagtcagcagcttat
agacaaaactttcatctccctggggatgaaaaaagagcacctgggggaaggggcagctgt
gggtgcagcttcagcagacttaaacgttcctgcctgccatctctgaagagagcagcagat
ctcccagcacagtactcgagctcagctaagggacagactgcctcctcaagttggtccctg
atccccgtacatcctgacaggaaaacacctcccaacaggggtcaacaatcaccttataca
ggaaagctctggctggcatctggcaggtgcccctctgggacaaagcttccagaggaagga
gcaagcagcagtctttgctgttctgcagcctttgctacagcagtagcatcgacatcaaca
aaaaggagaccatgcaaaaactccatcgaaaggtcaccaacagcaaagaccaaagaaata
caaactaccatcagagaatactatcaacatctctatgcaaataaaccagaaagtcttgaa
gaaatgcataaatttttggaaatatacaccctcccaagactaaaccaggaaaaagtcaac
accctgaatagaccaataacaatttctgaaattgatacagcagttaataacctaccaaca
aaaaaagcccaggaccagctggattcacagccaaattttgccagagagactgagcaggga
gaagtgaaagggggaaaagtagcaaagagaaagggaaaaactgggtcattcgacaatcac
aatgaacttgaagatgttttagttaatgtggatgcaaaggatgctgggctgaggatgact
gatcagagctcaggcttgcaagaccatcctaccaattggaagcaggtggaacatatagaa
gaactaggtcttactacagcaatctgcaatgatatcaaggtgaaggaaaaaatgaaagta
ccctcttctaaagtatcagaggatgatatttgggtctgtgaacaagagttgggagtcact
gcttggtgtcagagagaaaatgggccatgtcagaatgcagcttcccaggtatacacagca
tctgagagggttggctttcctaag