GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:50:59

Sequence gi568815592r:39215127_39422460 : 207334 bp : 47.62% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +   6107   6156   50  1  2   63  108    20 0.263   1.25
 1.02 Term +   8123   8222  100  2  1   16   55   143 0.536   1.40
 1.03 PlyA +   8896   8901    6                               1.05

 2.03 PlyA -   9334   9329    6                               1.05
 2.02 Term -  13381  13142  240  1  0  103   41    94 0.854   2.23
 2.01 Init -  13985  13800  186  2  0  101   78   336 0.995  30.96
 2.00 Prom -  23468  23429   40                              -4.46

 3.00 Prom +  26997  27036   40                              -2.76
 3.01 Init +  27187  27280   94  0  1   67  110    67 0.764   5.34
 3.02 Intr +  28483  28580   98  2  2   75   78    35 0.463   0.93
 3.03 Intr +  51294  51325   32  2  2   77  115    38 0.766   2.33
 3.04 Term +  52179  52350  172  0  1   69   37   105 0.302   0.80
 3.05 PlyA +  54045  54050    6                              -0.45

 4.00 Prom +  54091  54130   40                              -0.76
 4.01 Init +  57512  57521   10  1  1   95  103     0 0.411   2.90
 4.02 Intr +  73059  73186  128  1  2   61   96    73 0.442   5.80
 4.03 Intr +  77804  77990  187  1  1  108   67    70 0.803   6.16
 4.04 Term +  79664  79773  110  0  2   64   53    75 0.445   0.27
 4.05 PlyA +  81466  81471    6                               1.05

 5.07 PlyA -  83899  83894    6                               1.05
 5.06 Term -  84159  84013  147  0  0   51   45    75 0.475  -2.60
 5.05 Intr -  84611  84484  128  0  2  118   75    66 0.856   8.70
 5.04 Intr -  89005  88831  175  1  1   52   77   311 0.960  25.91
 5.03 Intr -  89529  89369  161  1  2   93   94   144 0.811  15.21
 5.02 Intr -  95881  95767  115  1  1   47   87   116 0.528   7.42
 5.01 Init -  99194  98958  237  2  0   56   36   471 0.981  34.71
 5.00 Prom -  99533  99494   40                             -15.48

 6.06 PlyA -  99598  99593    6                               1.05
 6.05 Term - 101316 101093  224  1  2   99   54   164 0.958  11.18
 6.04 Intr - 101821 101656  166  1  1   76   77   172 0.895  14.43
 6.03 Intr - 102826 102660  167  2  2  120   85   105 0.999  13.08
 6.02 Intr - 104007 103893  115  0  1   96   71   109 0.990  10.02
 6.01 Init - 107414 107202  213  2  0   76   72   370 0.878  30.94
 6.00 Prom - 108085 108046   40                              -5.56

 7.12 PlyA - 108571 108566    6                              -0.45
 7.11 Term - 111162 111047  116  1  2  104   43   118 0.693   7.63
 7.10 Intr - 128689 128544  146  0  2   45   41   183 0.001   9.23
 7.09 Intr - 130663 130574   90  0  0  104   62    58 0.733   3.91
 7.08 Intr - 142248 142151   98  0  2   66  116    10 0.104   0.41
 7.07 Intr - 145404 145269  136  2  1  132   80   237 0.781  27.87
 7.06 Intr - 147392 147308   85  0  1  108   44   112 0.081   7.68
 7.05 Intr - 170546 170460   87  0  0   89   85    45 0.102   4.24
 7.04 Intr - 182541 182468   74  2  2   86  103   -20 0.005  -1.65
 7.03 Intr - 184830 184729  102  2  0   90   66    60 0.020   3.29
 7.02 Intr - 198912 198867   46  1  1   44  103    39 0.003  -1.53
 7.01 Intr - 204877 204822   56  0  2  107   99    28 0.104   4.42

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr - 128689 128583  107  0  2   45  101   220 0.970  18.86
S.002 Init - 147378 147308   71  0  2   99   44    87 0.900   5.92
S.003 Intr + 150608 150788  181  1  1   92   97   118 0.837  12.54


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_1|49_aa
MHISGSHSLWPPQPVAKGHSHNHQTYCLVGDSFSNTTKAPQWQLDKDPY

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_1|150_bp
atgcacatcagtggctcccacagcctgtggcccccacagcctgtggccaaaggccactcc
cacaaccatcagacatactgcttggttggtgattccttcagcaacaccaccaaggccccg
cagtggcagctggacaaagatccctactga

>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_2|141_aa
MVDRGPLLTSAIIFYLAIGAAIFEVLEEPHWKEAKKNYYTQKLHLLKEFPCLGQEGLDKI
LEGQCHACQAFLKEREPGRVAGGSLSPSLGKIFRPQQSSGEELEALWGPNPRDEGWCLEC
WGRAQASGKAYLAETSFKGLE

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_2|426_bp
atggtggaccggggccctctgctcacctcggccatcatcttctacctggccatcggggcg
gcgatcttcgaagtgctggaggagccacactggaaggaggccaagaaaaactactacaca
cagaagctgcatctgctcaaggagttcccgtgcctgggtcaggagggcctggacaagatc
ctagagggccagtgccacgcctgccaggcttttcttaaggaacgtgaacccggcagagtg
gcgggagggtccctcagcccgagcctgggcaaaatcttccgcccccagcagagttccgga
gaggagctggaggctctgtggggcccgaacccacgggatgagggctggtgcctggaatgc
tggggacgcgctcaggcttccgggaaggcttatctcgcggagacatccttcaagggcttg
gagtaa

>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_3|131_aa
MQKPSLTSPRALTPAYALLTLPPLCFMRNITGWKTKMIAAMALFRALREKEETSLRQGCD
LIPESNFQSCKLHAWQPQVEWKLKTGYISGYCTHSLTAAKDQGEASLGCKKKPDSPGSRD
CALSLWGKEVS

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_3|396_bp
atgcagaagccttccctgacttccccaagggccctgaccccagcatatgccctcctgacc
cttcctcccttgtgcttcatgagaaatatcacaggctggaaaaccaagatgatagcagct
atggctctcttcagagctcttagagagaaagaggaaacttcactgagacaaggatgtgac
ctgatcccagagagcaacttccagtcctgcaagctgcatgcatggcagccccaggtggag
tggaagctcaaaacgggctacatttctgggtactgcacccactccctgactgctgcaaaa
gaccagggagaggcttctcttggctgcaagaagaagccagattctcctgggagcagggac
tgtgctctgagcctctgggggaaggaggtcagctag

>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_4|144_aa
MGTGRKEKTKTGKKETERKTAKKKRNKERGKKYRQIIVLYLKRCGQEWLTYTQQTLTVPC
LLCTHHAHVRCRFPIRKCWGVNTILLQVMRNGIWGIYAPGSLPLRGDNSHWRLKDRQVQG
DFLEEKVQLGFMSFLMKEGGEGEG

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_4|435_bp
atggggacaggaaggaaggaaaaaaccaagacgggaaagaaggagacagaaaggaagaca
gcaaagaaaaaacgaaataaggaaagagggaaaaaatacagacagattatcgtgctatac
ctgaaaaggtgtggccaggaatggttgacatatacgcagcagacgctgacagtgccctgc
ctgctctgcacccaccatgctcatgtacgctgcaggtttccaatccgcaaatgctgggga
gttaacaccatcctactccaagtgatgaggaatgggatttggggaatatatgcccccggc
tctctaccccttagaggggacaactcccattggaggctaaaagacaggcaagtccagggg
gacttcttggaggaaaaggtacagttgggcttcatgagcttcctgatgaaagagggtgga
gaaggagaaggttga

>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_5|320_aa
MYRPRARAAPEGRVRGCAVPSTVLLLLAYLAYLALGTGVFWTLEGRAAQDSSRSFQRDKW
ELLQNFTCLDRPALDSLIRDVVQAYKNGASLLSNTTSMGRWELVGSFFFSVSTITTIGYG
NLSPNTMAARLFCIFFALVGIPLNLVVLNRLGHLMQQGVNHWASRLGGTWQDPDKARWLA
GSGALLSGLLLFLLLPPLLFSHMEGWSYTEGFYFAFITLSTVGFGDYVIGMNPSQRYPLW
YKNMVSLWILFGMAWLALIIKLILSQLETPGRGIQRHVLGDMGCDFRVSGQHALLPHFLT
LAGCNAADMMAGSSGSHTAP

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_5|963_bp
atgtaccgaccgcgagcccgggcggctcccgagggcagggtccggggctgcgcggtgccc
agcaccgtgctcctgctgctcgcctacctggcttacctggcgctgggcaccggcgtgttc
tggacgctggagggccgcgcggcgcaggactccagccgcagcttccagcgcgacaagtgg
gagctgttgcagaacttcacgtgtctggaccgcccggcgctggactcgctgatccgggat
gtcgtccaagcatacaaaaacggagccagcctcctcagcaacaccaccagcatggggcgc
tgggagctcgtgggctccttcttcttttctgtgtccaccatcaccaccattggctatggc
aacctgagccccaacacgatggctgcccgcctcttctgcatcttctttgcccttgtgggg
atcccactcaacctcgtggtgctcaaccgactggggcatctcatgcagcagggagtaaac
cactgggccagcaggctggggggcacctggcaggatcctgacaaggcgcggtggctggcg
ggctctggcgccctcctctcgggcctcctgctcttcctgctgctgccaccgctgctcttc
tcccacatggagggctggagctacacagagggcttctacttcgccttcatcaccctcagc
accgtgggcttcggcgactacgtgattggaatgaacccctcccagaggtacccactgtgg
tacaagaacatggtgtccctgtggatcctctttgggatggcatggctggccttgatcatc
aaactcatcctctcccagctggagacgccagggaggggtatacagagacatgtcctgggt
gacatgggatgtgactttcgggtgtcggggcagcatgcccttctcccccacttccttact
ttagcgggctgcaatgccgccgatatgatggctgggagctctggcagccatacggcacca
tga

>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_6|294_aa
MPSAGLCSCWGGRVLPLLLAYVCYLLLGATIFQLLERQAEAQSRDQFQLEKLRFLENYTC
LDQWAMEQFVQVIMEAWVKGVNPKGNSTNPSNWDFGSSFFFAGTVVTTIGYGNLAPSTEA
GQVFCVFYALLGIPLNVIFLNHLGTGLRAHLAAIERWEDRPRRSQVLQVLGLALFLTLGT
LVILIFPPMVFSHVEGWSFSEGFYFAFITLSTIGFGDYVVGTDPSKHYISVYRSLAAIWI
LLGLAWLALILPLGPLLLHRCCQLWLLSRGLGVKDGAASDPSGLPRPQKIPISA

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_6|885_bp
atgcccagtgctgggctctgcagctgctggggtggccgggtgctgcccctgctgctggcc
tatgtctgctacctgctgctcggtgccactatcttccagctgctagagaggcaggcggag
gctcagtccagggaccagtttcagttggagaagctgcgcttcctggagaactacacctgc
ctggaccagtgggccatggagcagtttgtgcaggtcatcatggaagcctgggtgaaaggt
gtgaaccccaaaggcaactctaccaaccccagcaactgggactttggcagcagtttcttc
tttgcaggcacagtcgtcactaccataggatatgggaacctggcacccagcacagaggca
ggtcaggtcttctgtgtcttctatgccctgttgggcatcccgcttaacgtgatcttcctc
aaccacctgggcacagggctgcgtgcccatctggccgccattgaaagatgggaggaccgt
cccaggcgctcccaggtactgcaagtcctgggcctggctctgttcctgaccctggggacg
ctggtcattctcatcttcccacccatggtcttcagccatgtggagggctggagcttcagc
gagggcttctactttgctttcatcactctcagcaccattggctttggggactatgttgtt
ggcacagaccccagcaagcattatatctcagtgtatcggagcctggcagccatctggatc
ctcctgggcctggcgtggctggcgctgatcctcccactgggccccctgcttctgcacaga
tgctgccagctctggctgctcagtaggggcctcggcgtcaaggatggggcagcctctgac
cccagtgggctccccaggcctcagaagatccccatctctgcatga

>gi568815592r:39215127_39422460|GENSCAN_predicted_peptide_7|345_aa
XFSEAKALGESINEARSKIVIPDPYKNRNGSEKSRGCCLLGTLSSNGAIAGGCYQASKTL
WPWRWHLTSPNSLDFLIMHYPQNDQLISTRTEIGHLKEEITQRHIQQVALGRYKENLQEE
DEGISENMAVPLMPDQQEEKLRSQLEEEKRRYKTMFTRLKALKVEIEHLQLLMDKAKVKL
QKEFEVWWAEEATNLQVNSPAVNSLDHTKPFLQTSDSQHEWSQLLSNKSDVNARKILPSP
CPSPHSQKQSSTSTPLEDSIPKRPVSSIPLTGDSQTDSDIIAFIKARQSILQKQCKCTSL
GGSSWAAEQPSLPVDCVQTAQRYSVLQSYSVLPEALQTSTDELSK

>gi568815592r:39215127_39422460|GENSCAN_predicted_CDS_7|1038_bp
nnattttctgaagccaaggccctgggagaaagtataaatgaagcaagaagtaaaattgta
attccagatccctacaagaatagaaatggttcagagaaaagcaggggctgctgcctgctg
ggcacgctatcctctaatggtgccattgctggtggctgctaccaagcctcaaagaccctg
tggccctggcgatggcatctgactagtcctaactccctagatttccttattatgcattat
ccccaaaatgaccagcttatatccaccaggactgagatcggtcacctgaaggaagaaatc
acccagcggcatatacagcaagtagccctaggtaggtacaaagagaatctgcaggaagag
gatgaaggaatctcggaaaacatggccgtgcctctgatgccagaccagcaggaggagaag
ctgcgatcacaactggaggaagaaaagagaaggtataaaacaatgttcactcgcctgaaa
gccctgaaggtggagatcgagcacttgcagctgctcatggacaaagccaaggtgaagcta
cagaaagagtttgaagtctggtgggcagaggaggccaccaacctgcaggtaaattctcca
gcagtgaattcactcgatcacacgaagccatttctccagacatctgactcccagcatgaa
tggtcccaactcctctctaacaaaagtgatgtgaatgccaggaaaatcctgccctcgcct
tgccccagtccacacagccagaaacagagcagcaccagcaccccactggaagacagcatc
cccaagaggccagtgtcgtccatccctctcaccggagacagccagacggactcggacatc
atcgccttcatcaaggccagacagagcattctgcagaagcaatgtaagtgcacctccctc
ggtggctcctcctgggcagcagaacaaccgtcattacctgtggactgtgtccagactgct
caaagatactcagtgctacagagttactcagtcctgcctgaagccctgcagacatccacg
gatgagctttctaagtga