GENSCAN 1.0	Date run:  6-Nov-116	Time: 17:01:24

Sequence gi568815592r:2733611_2940586 : 206976 bp : 43.92% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.00 Prom +   4594   4633   40                              -2.46
 1.01 Init +  32013  32834  822  2  0  120  113  1236 0.725 124.02
 1.02 Intr +  35081  35272  192  1  0  100   76    92 0.997   8.89
 1.03 Intr +  36585  36751  167  2  2   85   89   116 0.542  10.16
 1.04 Intr +  45653  45882  230  2  2  100  111   126 0.887  13.61
 1.05 Intr +  49796  49951  156  0  0   60   95   217 0.980  19.58
 1.06 Intr +  50714  50793   80  0  2  116   88   -16 0.995   0.47
 1.07 Intr +  51397  51642  246  0  0   77   28   392 0.747  29.76
 1.08 Intr +  52400  52563  164  1  2  106   66    27 0.274   1.07
 1.09 Term +  55568  55778  211  2  1   42   39   112 0.272  -1.53
 1.10 PlyA +  56288  56293    6                               1.05

 2.06 PlyA -  56367  56362    6                               1.05
 2.05 Term -  57876  57768  109  2  1   94   48    57 0.128   0.28
 2.04 Intr -  64362  64227  136  1  1   99   72   250 0.969  24.13
 2.03 Intr -  66443  66325  119  1  2   -2   43    92 0.016  -4.19
 2.02 Intr -  68722  68621  102  0  0   89  105    38 0.134   4.89
 2.01 Init -  71399  71260  140  2  2   89    3   105 0.134   1.71
 2.00 Prom -  75014  74975   40                              -3.56

 3.00 Prom +  75953  75992   40                              -6.36
 3.01 Init +  77537  77603   67  1  1   67   98    89 0.466   9.03
 3.02 Term +  85739  85833   95  0  2  108   53    59 0.330   2.39
 3.03 PlyA +  86341  86346    6                               1.05

 4.09 PlyA -  86866  86861    6                               1.05
 4.08 Term -  89714  89638   77  0  2   49   37    81 0.127  -2.90
 4.07 Intr - 100402 100036  367  1  1   74   69   149 0.787   6.32
 4.06 Intr - 102413 102246  168  2  0   36   86   347 0.991  29.44
 4.05 Intr - 102640 102498  143  2  2   74  100   100 0.999   9.87
 4.04 Intr - 104389 104272  118  1  1   75  100    67 0.880   6.64
 4.03 Intr - 106984 106809  176  2  2   79   82   195 0.524  17.66
 4.02 Intr - 108373 108202  172  1  1   62   90    25 0.547  -0.38
 4.01 Init - 114865 114776   90  1  0   78   49    78 0.315   3.39
 4.00 Prom - 121232 121193   40                              -6.66

 5.16 PlyA - 122824 122819    6                              -0.45
 5.15 Term - 126999 126512  488  1  2   53   55   259 0.147  13.96
 5.14 Intr - 129245 129201   45  0  0   65   98    51 0.122   2.18
 5.13 Intr - 132701 132665   37  2  1  119   49    38 0.020   0.84
 5.12 Intr - 142815 142683  133  2  1   78   72   104 0.004   8.45
 5.11 Intr - 156960 156641  320  0  2   81   23   218 0.027   9.36
 5.10 Intr - 158378 158223  156  2  0   67  107   305 0.997  30.51
 5.09 Intr - 159943 159801  143  2  2   45   75   100 0.985   4.47
 5.08 Intr - 161898 161781  118  0  1   78   77    40 0.984   1.94
 5.07 Intr - 162580 162443  138  1  0   62   89   110 0.796   9.16
 5.06 Intr - 167011 166834  178  0  1  117  115    47 0.988  10.22
 5.05 Intr - 170045 169940  106  0  1   93   47    62 0.373   1.87
 5.04 Intr - 172615 172585   31  1  1  114   80     2 0.021  -0.30
 5.03 Intr - 185834 185690  145  1  1   85   96     3 0.106   1.08
 5.02 Intr - 187585 187475  111  0  0   45   80    66 0.006   0.99
 5.01 Intr - 206877 206692  186  2  0   74   14   181 0.114   8.10

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl + 147579 147899  321  2  0   40   45   173 0.845   4.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:2733611_2940586|GENSCAN_predicted_peptide_1|755_aa
MEVSGPEDDPFLSQLHQVQCPVCQQMMPAAHINSHLDRCLLLHPAGHAEPAAGSHRAGER
AKGPSPPGAKRRRLSESSALKQPATPTAAESSEGEGEEGDDGGETESRESYDAPPTPSGA
RLIPDFPVARSSSPGRKGSGKRPAAAAAAGSASPRSWDEAEAQEEEEAVGDGDGDGDADA
DGEDDPGHWDADAAEAATAFGASGGGRPHPRALAAEEIRQMLQGKPLADTMRPDTLQDYF
GQSKAVGQDTLLRSLLETNEIPSLILWGPPGCGKTTLAHIIASNSKKHSIRFVTLSATNA
KTNDVRDVIKQAQNEKSFFKRKTILFIDEIHRFNKSQQVNAALLSRCRVIVLEKLPVEAM
VTILMRAINSLGIHVLDSSRPTDPLSHSSNSSSEPAMFIEDKAVDTLAYLSDGDARAGLN
GLQLAVLARLSSRKMFCKKSGQSYSPSRVLITENDVKEGLQRSHILYDRAGEEHYNCISA
LHKSMRGSDQNASLYWLARMLEGGEDPLYVARRLVRFASEDIGLADPSALTQAVAAYQGC
HFIGMPECEVLLAQCVVYFARAPKSIEVYSAYNNVKACLRNHQGPLPPVPLHLRNAPTRL
MKDLGYGKGYKYNPMYSEPVDQEYLPEELRGLHISKQSFFFYFMCVLNTKYATPSAQLRV
ICPYCYFLSLSLVACRAYAHKDGPFRHAALNTVCNADTGPVLEHAVLGRACSTLSAVSSS
GALSSQLSVTVKSSLKVCKCLFFGFKESYFVKADF

>gi568815592r:2733611_2940586|GENSCAN_predicted_CDS_1|2268_bp
atggaggtgagcgggccggaagacgaccccttcctttcgcagctgcaccaggtgcagtgc
cccgtgtgccagcagatgatgcccgccgcgcacatcaactcgcacctggaccgctgtctg
ctgctccacccggcggggcacgcggagcccgcggccgggtcgcaccgcgccggggagcgg
gccaaggggccctcgccgcccggcgccaagaggcggcggctgtcggagagctcggcgctg
aagcagccagccaccccgacggcagccgagagcagcgagggcgagggtgaggagggcgac
gacggcggcgagaccgagagccgcgagagctacgacgcgccgcccacacccagcggcgcc
cgccttatccccgacttcccggtggcccgctccagcagccccgggaggaaggggtcgggg
aagaggccggcggccgccgccgcggcggggagcgcgtctccgcgcagctgggacgaggcg
gaggcgcaggaggaggaggaggccgtgggcgacggcgatggcgacggggacgcggacgcg
gacggcgaggacgacccggggcactgggacgcggacgctgccgaagccgccaccgccttc
ggggccagtggcgggggccgcccgcacccccgggcgctggctgccgaggagatccgacag
atgctacagggcaagccgctggccgacacgatgcgtcctgacacgctgcaggattacttc
gggcagagcaaggccgtgggccaggataccctgctgcgctcgctcctggagaccaacgaa
atcccctcgcttatcctgtgggggccgccgggctgcggcaagaccactctggctcacatc
atagccagcaacagcaagaaacatagcataaggtttgtgacattatctgcaacaaatgcc
aagacaaatgatgtgcgagatgtcataaaacaagctcaaaatgaaaagagctttttcaaa
aggaaaaccatcctttttattgatgagattcatcggttcaataaatctcagcaggtcaac
gctgctcttctgagccgctgtcgagtgattgttcttgagaagcttccagtagaggcaatg
gtgactattttaatgcgagcgatcaactccctgggaatccacgtcctagactctagccgt
cccactgaccctctgagccacagcagcaacagcagctcagagcccgccatgttcatagag
gataaagcagtagacaccctggcttacctcagtgacggtgacgcccgagctgggttgaac
ggactgcagctggcggtgctggctaggttaagctctaggaagatgttctgtaagaagagt
gggcaatcctattctcccagtagagttctgatcacagagaatgacgtgaaggagggccta
cagcgatcccacattttatatgaccgggcaggtgaggagcattacaactgcatctccgcc
ctgcacaagtccatgcggggctcagaccagaacgcctccctctactggctggctcgcatg
ctcgagggaggagaggacccactctacgtggcacggaggcttgtcaggtttgccagcgag
gacataggtctggcagacccgtctgcgttaacacaagcggttgctgcctaccaaggctgt
cattttataggcatgcctgaatgtgaggtgcttctggcccagtgtgtggtctactttgcc
agagccccaaagtccattgaggtgtacagcgcctacaacaacgtcaaagcctgcctgagg
aaccaccaggggccactgccccccgtgcccctgcacctgaggaacgcgcccactaggctg
atgaaggatttgggctatggcaaaggctacaagtacaaccccatgtacagcgagcctgtg
gatcaggagtacctgcctgaagagttgagggggctccatatttctaaacagtcgtttttc
ttttactttatgtgtgtcctgaacacaaaatacgccactccttctgctcagttaagagtt
atttgtccctactgctacttcctctccctctccttagttgcatgtcgtgcatatgcccac
aaggatggccccttcagacatgcggccctgaacacagtgtgtaacgcggacacggggcct
gtgctggagcacgcggtgctggggagagcctgcagcacactttctgctgtatccagcagc
ggggcactgagcagccaactttctgtaactgtaaaatcaagcttgaaagtttgcaaatgc
ttgttttttggtttcaaagaatcttattttgtgaaagcagatttttaa

>gi568815592r:2733611_2940586|GENSCAN_predicted_peptide_2|201_aa
MVEDLCIIGIDTWAAVAQNVTPPRRHALTATAAQIHSCLPPKLPKPQRCPHAIKKIRIGL
VAAICAGETELRNSVSMRLGWARTQTVTQLHLLMYVLTTQEKGPPEVNAPERVFDTPDFA
ACPGQHGGRGGVGAGEEEEKEEEEEEEEEEEEEEEEEEEEEEICLGLTTNTETQSWPEPG
DLELVEGLVRDSSDTGSLFPG

>gi568815592r:2733611_2940586|GENSCAN_predicted_CDS_2|606_bp
atggttgaggacctctgcattataggcatcgacacttgggctgctgtggcacagaacgtc
acaccacctagacggcatgccctcacagcaacagcggcgcagatccactcctgcctacca
cctaagctccccaagccccagaggtgtccccatgcaataaagaaaataagaattggatta
gtagcagccatctgtgcaggggagactgagctccgcaactctgtgtccatgaggcttggc
tgggctcgaacgcagaccgtcacccagctccatttacttatgtatgttctaacaacacag
gaaaaaggacctccagaagtgaatgccccagaacgagtgtttgacactcctgactttgca
gcctgcccagggcagcatggaggaaggggaggagtaggagcaggggaggaggaggagaag
gaggaggaggaggaagaggaggaggaggaggaggaagaggaggaggaggaggaggaggag
gaggagatctgccttgggttaacgacaaatactgaaactcagtcttggcctgaacctggt
gacctggagctggtggaaggcctggtgagagacagctcagacactggctcactctttcct
ggctga

>gi568815592r:2733611_2940586|GENSCAN_predicted_peptide_3|53_aa
MSEDASPPAKDPGAKSTEGILEGLLASKDSTILIPGPQPRAQFPVFRNINTWI

>gi568815592r:2733611_2940586|GENSCAN_predicted_CDS_3|162_bp
atgagcgaggatgcctctccaccagcaaaagatccaggtgcaaagagcactgaaggcatc
ttggagggactccttgccagcaaggactccactatacttattcctggtccccagccacga
gcacagtttccagtattcagaaacattaatacgtggatctga

>gi568815592r:2733611_2940586|GENSCAN_predicted_peptide_4|436_aa
MAPTPLLDVAAYASTSAKTFLAILVNIDFVATSGARTPTQSPGRAAAPPAAAGPGDASAC
YKSSGPRCLLPDLAPSSEPGACLGGLSVFTMEQLSSANTRFALDLFLALSENNPAGNIFI
SPFSISSAMAMVFLGTRGNTAAQLSKEFLVSTQKTYGADLASVDFQHASEDARKTINQWV
KGQTEGKIPELLASGMVDNMTKLVLVNAIYFKGNWKDKFMKEATTNAPFRLNKKDRKTVK
MMYQKKKFAYGYIEDLKCRVLELPYQGEELSMVILLPDDIEDESTGLKKIEEQLTLEKLH
EWTKPENLDFIEVNVSLPRFKLEESYTLNSDLARLGVQDLFNSSKADLSGMSGARDIFIS
KIVHKSFVEVNEEGTEAAAATAGIATFCMLMPEENFTADHPFLFFIRHNSSVLEATKSKI
KVQEDLMSGKGLLTGS

>gi568815592r:2733611_2940586|GENSCAN_predicted_CDS_4|1311_bp
atggcccctacccccttactggatgtggctgcttatgcttctaccagtgctaaaaccttc
ctcgccatattggtgaatattgactttgtggcgacctcgggagctcggactcctacgcag
tcaccgggaagggccgccgccccgcccgcggctgctggcccgggtgacgcttccgcctgc
tataagagcagcggccctcggtgcctccttcctgacctcgcacccagctcggagcccgga
gcgtgcctcggcggcctgtcggttttcaccatggagcagctgagctcagcaaacacccgc
ttcgccttggacctgttcctggcgttgagtgagaacaatccggctggaaacatcttcatc
tctcccttcagcatttcatctgctatggccatggtttttctggggaccagaggtaacacg
gcagcacagctgtccaaggagttcttggtttcgactcagaaaacatatggtgctgacctg
gccagtgtggattttcagcatgcctctgaagatgcaaggaagaccataaaccagtgggtc
aaaggacagacagaaggaaaaattccggaactgttggcttcgggcatggttgataacatg
accaaacttgtgctagtaaatgccatctatttcaagggaaactggaaggataaattcatg
aaagaagccacgacgaatgcaccattcagattgaataagaaagacagaaaaactgtgaaa
atgatgtatcagaagaaaaaatttgcatatggctacatcgaggaccttaagtgccgtgtg
ctggaactgccttaccaaggcgaggagctcagcatggtcatcctgctgccggatgacatt
gaggacgagtccacgggcctgaagaagattgaggaacagttgactttggaaaagttgcat
gagtggactaaacctgagaatctcgatttcattgaagttaatgtcagcttgcccaggttc
aaactggaagagagttacactctcaactccgacctcgcccgcctaggtgtgcaggatctc
tttaacagtagcaaggctgatctgtctggcatgtcaggagccagagatatttttatatca
aaaattgtccacaagtcatttgtggaagtgaatgaagagggaacagaggcggcagctgcc
acagcaggcatcgcaactttctgcatgttgatgcccgaagaaaatttcactgccgaccat
ccattccttttctttattcggcataattcctcagtgctggaggccacaaagtccaagatc
aaggtacaggaagatttgatgtctggcaagggcctgcttactggttcctag

>gi568815592r:2733611_2940586|GENSCAN_predicted_peptide_5|778_aa
XNKVTIFAVSATAHKGNADAKCKRTNLITAQKTPTGYHYKLRQPAFILLSGPTHILLIGR
TKCKQQDLDSTPGVSVAVVMVMLVAGTSQVLESWKCGHHGTSWHRDADGIQGLSLEVPLM
PTPYCSWKGVLRQTLREGSWVLHKKELRDFKEVCQMPTDALFLRAEALDAAGSQPTSLGC
QVLNPVLKRPWRRGPCIMETLSNASGTFAIRLLKILCQDNPSHNVFCSPVSISSALAMVL
LGAKGNTATQMAQALSLNTEEDIHRAFQSLLTEVNKAGTQYLLRTANRLFGEKTCQFLST
FKESCLQFYHAELKELSFIRAAEESRKHINTWVSKKTEGKIEELLPGSSIDAETRLVLVN
AIYFKGKWNEPFDETYTREMPFKINQEEQRPVQMMYQEATFKLAHVGEVRAQLLELPYAR
KELSLLVLLPDDGVELSTVEKSLTFEKLTAWTKPDCMKSTEVEVLLPKFKLQEDYDMESV
LRHLGIVDAFQQGKADLSAMSAERDLCLSKFVHKSFVEVNEEGTEAAAASSCFVVAECCM
ESGPRLEKNGPDPLDSSDERIQREAFESVLAETFFTKEPLRCWCPWRAWGITKSRLISIS
SGDTFHIGYDWSIILEDSGAQLASPSGPHTGGAGGAACQSRTVRSHSSALGWSMGLGAVE
QGVVLVGEARAVQEPMEWVGGSGMAGCRSRALPRGKAAKARREIERSAGGLALLRDPVHP
PQPLARVLSPPLPGASRAGCSECAARQAHVHPELQLASKRCTQPRFPLVPLPPHLPAS

>gi568815592r:2733611_2940586|GENSCAN_predicted_CDS_5|2337_bp
nnaaataaagtgacaattttcgcagtgagcgctacagctcataaaggcaacgcagacgcc
aaatgcaaacgaacaaaccttatcacagcacagaaaaccccaacgggttaccactacaag
ctccggcagcctgcttttattcttttatctggccccacccacatcctgctgattggtaga
accaagtgcaaacagcaggacctagactcaacccctggtgtttcagtagcagtagtgatg
gtgatgctggtggcaggaacctcccaagtgctggagtcttggaagtgtgggcaccatgga
acttcctggcacagggatgcagatggcatccaaggtctgtctctagaagtgccactcatg
ccaacgccctactgttcttggaaaggggtcctgagacaaactctaagagaaggttcttgg
gtcttgcacaagaaagaactcagggactttaaggaagtgtgtcaaatgcccacagacgcc
ttgtttcttcgcgcggaggccctggacgccgcaggctcccaacctacttctctgggctgt
caggttctgaacccggtcctgaagaggccctggcgccgggggccctgcatcatggaaact
ctttctaatgcaagtggtacttttgccatacgccttttaaagatactgtgtcaagataac
ccttcgcacaacgtgttctgttctcctgtgagcatctcctctgccctggccatggttctc
ctaggggcaaagggaaacaccgcaacccagatggcccaggcactgtctttaaacacagag
gaagacattcatcgggctttccagtcgcttctcactgaagtgaacaaggctggcacacag
tacctgctgagaacggccaacaggctctttggagagaaaacttgtcagttcctctcaacg
tttaaggaatcctgtcttcaattctaccatgctgagctgaaggagctttcctttatcaga
gctgcagaagagtccaggaaacacatcaacacctgggtctcaaaaaagaccgaaggtaaa
attgaagagttgttgccgggtagctcaattgatgcagaaaccaggctggttcttgtcaat
gccatctacttcaaaggaaagtggaatgaaccgtttgacgaaacatacacaagggaaatg
ccctttaaaataaaccaggaggagcaaaggccagtgcagatgatgtatcaggaggccacg
tttaagctcgcccacgtgggcgaggtgcgcgcgcagctgctggagctgccctacgccagg
aaggagctgagcctgctggtgctgctgcctgacgacggcgtggagctcagcacggtggaa
aaaagtctcacttttgagaaactcacagcctggaccaagccagactgtatgaagagtact
gaggttgaagttctccttccaaaatttaaactacaagaggattatgacatggaatctgtg
cttcggcatttgggaattgttgatgccttccaacagggcaaggctgacttgtcggcaatg
tcagcggagagagacctgtgtctgtccaagttcgtgcacaagagttttgtggaggtgaat
gaagaaggcaccgaggcagcggcagcgtcgagctgctttgtagttgcagagtgctgcatg
gaatctggccccagactggaaaagaatggcccagatcctctggactcctcagatgagcgg
attcagagagaagcttttgagagcgtgctggcggagacatttttcacaaaagagcccttg
cggtgctggtgtccgtggcgtgcctgggggatcaccaagagccgcctcatcagcataagc
tcaggggacacctttcacattgggtatgactggagcatcatccttgaagactcaggagcc
cagttggcttcacccagtggaccccacactgggggtgcaggtggagctgcctgccagtcc
cgcaccgtgcgctcgcattcctcagcccttgggtggtcgatgggactgggcgctgtggag
cagggggtggtgcttgtcggggaggctcgggccgtacaggagcccatggagtgggtggga
ggctcaggcatggcgggctgcaggtcccgagccctgccccgcgggaaggcagctaaggcc
cggcgagaaatcgagcgcagcgccggtgggctggcactgctgcgggacccagtacaccct
ccgcagccgctggcccgggtgctaagtcccccattgcccggggccagcagggccggctgc
tccgagtgcgcggcccgccaagcccacgtccacccggaactccagctggccagcaagcgc
tgcacgcagccccggttcccgctcgtgcctctccctccacacctccctgcaagctga