GENSCAN 1.0	Date run:  8-Nov-116	Time: 05:31:21

Sequence gi568815592r:149405534_149646005 : 240472 bp : 43.23% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   4044   4163  120  1  0  112   28    63 0.442   3.17
 1.02 Intr +  18789  18856   68  1  2   51  103    68 0.000   3.22
 1.03 Intr +  30642  30841  200  2  2   78   42   102 0.007   2.75
 1.04 Intr +  38539  39236  698  1  2   53   82   367 0.310  23.73
 1.05 Intr +  40613  40669   57  0  0  102   80    19 0.287   1.36
 1.06 Term +  40871  40974  104  0  2   57   40    76 0.285  -1.86
 1.07 PlyA +  42080  42085    6                               1.05

 2.07 PlyA -  42115  42110    6                               1.05
 2.06 Term -  45946  45150  797  2  2  118   49   772 0.973  69.75
 2.05 Intr -  47189  47083  107  1  2   84   64    67 0.955   3.76
 2.04 Intr -  51367  51133  235  2  1   99   94   816 0.960  80.05
 2.03 Intr -  56437  56298  140  0  2   95   69    90 0.928   7.91
 2.02 Intr -  69080  68706  375  1  0   85   55   467 0.146  37.23
 2.01 Init -  81932  81880   53  2  2   99   73    18 0.044   2.03
 2.00 Prom -  85296  85257   40                              -4.56

 3.10 PlyA -  85745  85740    6                               1.05
 3.09 Term - 100171  99920  252  1  0  105   48   139 0.562   7.24
 3.08 Intr - 111917 111802  116  0  2   91   13   182 0.197  11.17
 3.07 Intr - 115638 115527  112  0  1   31   86    62 0.646   0.25
 3.06 Intr - 119676 119610   67  2  1   77   95    56 0.943   4.11
 3.05 Intr - 121243 121119  125  1  2   75   84    33 0.937   0.98
 3.04 Intr - 128041 127925  117  1  0   65   95   151 0.999  14.16
 3.03 Intr - 129241 129145   97  0  1   19   95    53 0.989  -0.89
 3.02 Intr - 130189 130063  127  2  1   83   80   100 0.796   8.44
 3.01 Init - 140472 140403   70  0  1  121   65   160 0.984  18.21
 3.00 Prom - 155565 155526   40                              -1.76

 4.00 Prom + 157243 157282   40                              -2.56
 4.01 Init + 160882 161001  120  0  0   93   91   247 0.999  23.69
 4.02 Intr + 166974 167070   97  2  1   64   95     6 0.139  -1.52
 4.03 Intr + 173289 173440  152  1  2   80   71    82 0.175   5.58
 4.04 Intr + 174301 174457  157  0  1   81   88     0 0.175  -1.12
 4.05 Intr + 175060 175190  131  2  2   68   94    40 0.142   3.01
 4.06 Intr + 176907 177070  164  2  2   76  108   -31 0.096  -3.53
 4.07 Term + 185194 185305  112  1  1   61   41   133 0.876   3.93
 4.08 PlyA + 185600 185605    6                               1.05

 5.00 Prom + 187138 187177   40                              -5.36
 5.01 Sngl + 188786 189010  225  1  0   59   41   291 0.210  16.64
 5.02 PlyA + 189031 189036    6                               1.05

 6.11 PlyA - 189367 189362    6                               1.05
 6.10 Term - 189701 189503  199  1  1   28   32   184 0.828   3.67
 6.09 Intr - 191656 191530  127  2  1   33   80    86 0.740   2.04
 6.08 Intr - 192108 191974  135  1  0   99   70    60 0.820   5.84
 6.07 Intr - 192817 192691  127  1  1   91   25    31 0.761  -2.65
 6.06 Intr - 196219 196061  159  1  0   49   23   119 0.597   1.68
 6.05 Intr - 197840 197735  106  1  1   81  106    27 0.954   4.02
 6.04 Intr - 199249 199128  122  1  2   65  115    76 0.915   7.29
 6.03 Intr - 217750 217570  181  0  1   36   94    94 0.836   4.67
 6.02 Intr - 227383 227226  158  1  2   59  115    58 0.882   4.41
 6.01 Intr - 233027 232853  175  1  1  105   94    36 0.553   5.84

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:149405534_149646005|GENSCAN_predicted_peptide_1|415_aa
XQRSIIKTPKTQDTEDDEGAQWNCTACTFLNHPALIRCEQWHLHLRVPIYKADMEKIHIN
YHHDLGAASCPIPGPKLCHLASCDFYSEAHSKTILPVPPDVPVSADTGAEKGESQCSELP
GHLPSGVMGFQPQVLATLQPHQLVPLSQCVSQPVCQSASVSQPVCQSASVSHPVSVSQCV
SHCQPMSASVSASQCQPVLVSQCVSQPVSASVSHPVSVSQCVSHCQPMSASVSASQCQPV
LVSQCVSQPVSASVSHPVSVSQCVSHCQPMSASVSASQCQPVLVSQCVSQPVSVSQCVSH
CQPMSASVSASQCQPAHVSASVSVSQSQPVSVRQCQSASVSPSVSHPVFQSASVHQPVSV
SQWKAKGAPLSPQVAAASKPSGPYASKEPMFGFMLCRHLEIVTHFEQGTLQFDFA

>gi568815592r:149405534_149646005|GENSCAN_predicted_CDS_1|1248_bp
natcaaaggtccatcatcaaaacaccaaagactcaagacacagaagatgatgagggagct
cagtggaattgtaccgcctgtacttttttgaaccatccagccttaattcgctgtgaacag
tggcatttacacttacgtgtgcccatctacaaagcagacatggaaaaaatacacatcaac
taccaccatgaccttggtgcagccagctgccccatcccaggcccaaagctctgccatctg
gcttcttgtgatttctattccgaggctcacagcaagaccatcctccccgttcctccagat
gttcctgtctctgcagacactggagcagagaagggtgagagccagtgctcagagctgccc
ggccatttgccttcaggggtcatgggcttccagccacaggtcctggccacacttcagcct
catcagctagtgccactcagccagtgtgtcagtcagccagtgtgtcagtcagccagtgtt
agtcagccagtgtgtcagtcagccagtgtcagccacccagtgtcagtcagccagtgtgtc
agccactgtcagccaatgtcagccagtgtgtcagccagccagtgtcagccagtgttagtc
agccagtgtgtcagtcagccagtgtcagccagtgtcagtcacccagtgtcagtcagccag
tgtgtcagccactgtcagccaatgtcagccagtgtgtcagccagccagtgtcagccagtg
ttagtcagccagtgtgtcagtcagccagtgtcagccagtgtcagtcacccagtgtcagtc
agccagtgtgtcagccactgtcagccaatgtcagccagtgtgtcagccagccagtgtcag
ccagtgttagtcagccagtgtgtcagtcagccagtgtcagtcagccagtgtgtcagccac
tgtcagccaatgtcagccagtgtgtcagccagccagtgtcagccagcccatgtgtcagcc
agtgtgtcagtcagccagtctcagccagtgtcagtcaggcagtgtcagtcagccagtgtg
tcacccagtgtcagccacccagtgtttcagtcagccagtgtccatcagccagtgtccgtc
agccaatggaaagccaagggagccccacttagtcctcaggtggctgcagcaagcaaaccc
tcagggccctacgcttcgaaggaacccatgtttggtttcatgctctgccgacatcttgaa
attgttacacattttgaacagggaaccttgcagtttgattttgcatag

>gi568815592r:149405534_149646005|GENSCAN_predicted_peptide_2|568_aa
MASSTGLELKILTISYSISCLQGSERRKPGAGPAPVAAGHSMEHPSKMEFFQKLGYDRED
VLRVLGKLGEGALVNDVLQELIRTGSRPGALEHPAAPRLVPRGSCGVPDSAQRGPGTALE
EDFRTLASSLRPIVIDGSNVAMSHGNKETFSCRGIKLAVDWFRDRGHTYIKVFVPSWRKD
PPRADTPIREQHVLAELERQAVLVYTPSRKVHGKRLVCYDDRYIVKVAYEQDGVIVSNDN
YRDLQSENPEWKWFIEQRLLMFSFVNDRFMPPDDPLGRHGPSLSNFLSRKPKPPEPSWQH
CPYGKKCTYGIKCKFYHPERPHHAQLAVADELRAKTGARPGAGAEEQRPPRAPGGSAGAR
AAPREPFAHSLPPARGSPDLAALRGSFSRLAFSDDLGPLGPPLPVPACSLTPRLGGPDWV
SAGGRVPGPLSLPSPESQFSPGDLPPPPGLQLQPRGEHRPRDLHGDLLSPRRPPDDPWAR
PPRSDRFPGRSVWAEPAWGDGATGGLSVYATEDDEGDARARARIALYSVFPRDQVDRVMA
AFPELSDLARLILLVQRCQSAGAPLGKP

>gi568815592r:149405534_149646005|GENSCAN_predicted_CDS_2|1707_bp
atggcatcttctacaggacttgagctgaagatattgacgatttcttactcaatctcatgt
ctgcagggctctgagaggaggaagcctggggcaggacctgcgccagtggccgctgggcac
agcatggagcaccccagcaagatggaattcttccagaagctgggctatgaccgggaggat
gtgctccgggtgttgggcaagctgggcgagggcgccctggtcaacgacgtgctgcaggag
cttatccgcacgggcagccgcccgggtgccctggagcacccggctgcacccaggctagtg
cctcggggctcctgtggggtcccggactctgcccagcgtggcccggggacagccctggaa
gaggacttcagaaccctggccagttctctgcgacccatagtgattgatggcagcaacgtg
gcgatgagccatggaaataaagaaaccttctcttgccggggaatcaagctggctgttgac
tggttcagggacagaggacacacctacatcaaagtttttgttccatcctggaggaaggac
ccaccaagagctgacacccctatcagagagcagcacgtgctggcggagctggagcggcag
gcggtgctggtgtacacgccgtcccgcaaggtgcacggcaagcgcctggtctgctacgac
gaccgctacatcgtgaaggtggcctacgagcaggacggcgtcatcgtctccaacgacaac
taccgggacctgcagagcgagaaccccgagtggaagtggttcatcgagcagaggctgctc
atgttctccttcgtcaacgaccggttcatgccgcctgatgaccccctgggccgccatgga
ccctccctgagcaacttcctgagcaggaagccgaagcccccagagccatcctggcagcat
tgtccttatggcaagaaatgcacctatggcatcaagtgcaagttctaccacccggagagg
ccgcaccacgcgcaactggcggtggccgacgagctccgcgccaagacaggggcccggcct
ggcgcgggcgccgaggagcagcggccaccgagagccccgggcggctccgcaggagcccgg
gcggccccccgggaaccatttgcgcacagcctcccgccggcgcgggggtccccggacctg
gccgccctgcgagggagcttctctcggctggccttcagcgacgacctggggcccctgggg
ccgcctctcccggtccccgcctgcagcctcacgccccgactgggcgggcccgactgggtg
tccgcgggcggccgggtgccaggcccgctcagcctccctagcccggagagccagttctcc
ccgggcgacctcccgcctccgcccggcctgcagctccagccgcggggcgaacaccgccct
agggacctgcacggcgacttgctttccccgcgcaggccacccgacgacccgtgggcccgt
ccaccccgctccgaccgcttccctgggcgctccgtctgggcggagccggcctggggcgac
ggcgccactgggggactttcagtgtacgcgaccgaggacgacgagggggacgcgcgcgcc
cgggctcgcatcgcgctctacagcgtcttcccgcgtgaccaggtggaccgcgtgatggcc
gcgttcccggagctctcagacctcgccaggctcatcctcctggtacagagatgccagagc
gcgggggcgcccctgggcaagccctaa

>gi568815592r:149405534_149646005|GENSCAN_predicted_peptide_3|360_aa
MAVLLETTLGDVVIDLYTEERPRGENLDYLDGVHTVFGEVTEGMDIIKKINETFVDKDFV
PYQDIRINHTVILDDPFDDPPDLLIPDRSPEPTREQLDSGRIGADEEIDDFKGRSAEEVE
EIKAEKEAKTQAILLEMVGDLPDADIKPPENVLFVCKLNPVTTDEDLEIIFSRFGPIRSC
EVIRDWKTGESLCYAFIEFEKEEDCEKAFFKMDNVLIDDRRIHVDFSQSVAKVKWKGKGG
KYTKSDFKEYEKEQDKPPNLVLKDKVKPKQEYPYQESDIYREMGFGHYEEEESCWEKQKS
EKRDRTQNRSRSRSRERDGHYSNSHKSKYQTDLYERERSKKRDRSRSPKKSKDKEKSKYR

>gi568815592r:149405534_149646005|GENSCAN_predicted_CDS_3|1083_bp
atggcggttctactggagaccactttaggcgacgtcgtcatcgacttgtacaccgaagaa
cggccgcgtggagaaaatctagattatcttgatggtgtccatacggtgtttggtgaggtg
acagaaggcatggacataattaagaaaattaatgagacctttgttgacaaggactttgta
ccatatcaggatatcaggataaatcatacggtgattttagatgatccatttgatgaccct
cctgatttattaatccctgatcgatcaccagaacctacaagggaacaattagatagtggt
cgaataggagcagatgaagaaattgatgatttcaaaggaagatcagctgaggaagtagaa
gaaataaaggcagaaaaagaggctaaaactcaggctatacttttggagatggtgggagac
ctacctgatgcagatattaaacctccagaaaatgtactgtttgtgtgtaaattgaaccca
gtgaccacagatgaggatctggaaataatattctctagatttgggccaataagaagttgt
gaagttatccgagactggaagacaggagagtccctctgttacgcttttattgaatttgaa
aaggaagaagattgtgagaaagcattcttcaaaatggacaatgtgcttatagatgacaga
agaatacatgtggattttagccagtcggttgcaaaggttaaatggaaaggaaaaggtggg
aaatacaccaagagtgatttcaaggagtatgaaaaagaacaggataaaccacctaatttg
gttctgaaagataaagtaaagcccaaacaggagtatccttaccaagaatcagatatctat
agagaaatggggtttggtcactatgaagaagaagaaagctgttgggagaaacaaaagagt
gaaaagagagaccgaactcagaaccgaagtcgtagccgatctcgagagagggatggccat
tatagtaatagtcataaatcaaaataccaaacagatctttatgaaagagaaaggagtaaa
aagagagaccgaagcagaagtccaaagaagtccaaagataaagaaaaatctaagtataga
tga

>gi568815592r:149405534_149646005|GENSCAN_predicted_peptide_4|310_aa
MEGAPPGSLALRLLLFVALPASGWLTTGAPEPPPLSGAPQVVLNITYESGQVYVNDLPVN
SGVTRISCQTLIVKNENLENLEEKEYFGIVSVRILVHEWPMTSGSSLQLIVIQEEVVEID
GKQVQQKDVTEIDILVKNRGVLRHSNYTLPLEESMLYSISRDSDILFTLPNLSKKESVSS
LQTTSQYLIRNVETTVDEDVLPGKLPETPLRAEPPSSYKVMCQWMEKFRKDLCRFWSNVF
PVFFQFLNIMVVGITGAAVVITILKVFFPVSEYKGILQLDKVDVIPVTAINLYPDGPEKR
AENLEDKTCI

>gi568815592r:149405534_149646005|GENSCAN_predicted_CDS_4|933_bp
atggagggcgctccaccggggtcgctcgccctccggctcctgctgttcgtggcgctaccc
gcctccggctggctgacgacgggcgcccccgagccgccgccgctgtccggagccccacag
gttgttcttaacataacctatgagagtggacaggtgtatgtaaatgacttacctgtaaat
agtggtgtaacccgaataagctgtcagactttgatagtgaagaatgaaaatcttgaaaat
ttggaggaaaaagaatattttggaattgtcagtgtaaggattttagttcatgagtggcct
atgacatctggttccagtttgcaactaattgtcattcaagaagaggtagtagagattgat
ggaaaacaagttcagcaaaaggatgtcactgaaattgatattttagttaagaaccgggga
gtactcagacattcaaactataccctccctttggaagaaagcatgctctactctatttct
cgagacagtgacattttatttacccttcctaacctctccaaaaaagaaagtgttagttca
ctgcaaaccactagccagtatcttatcaggaatgtggaaaccactgtagatgaagatgtt
ttacctggcaagttacctgaaactcctctcagagcagagccgccatcttcatataaggta
atgtgtcagtggatggaaaagtttagaaaagatctgtgtaggttctggagcaacgttttc
ccagtattctttcagtttttgaacatcatggtggttggaattacaggagcagctgtggta
ataaccatcttaaaggtgtttttcccagtttctgaatacaaaggaattcttcagttggat
aaagtggacgtcatacctgtgacagctatcaacttatatccagatggtccagagaaaaga
gctgaaaaccttgaagataaaacatgtatttaa

>gi568815592r:149405534_149646005|GENSCAN_predicted_peptide_5|74_aa
MPAWFLNRQKDVKDGKYSQVLANGLDNKLCEDLERLKKIRARRGLRHFWGLRVRGQHTKT
TGCRGRIVGVSKKK

>gi568815592r:149405534_149646005|GENSCAN_predicted_CDS_5|225_bp
atgccagcctggttcttgaacagacagaaggatgtaaaggatggaaaatatagccaggtc
ctagccaatggtctggacaacaagctctgtgaagacctggagcgactgaaaaagattcgg
gcccgtagagggctgcgtcacttctggggccttcgtgtccgaggccagcacaccaagacc
acaggctgccgtggccgcatcgtgggtgtgtctaagaagaagtaa

>gi568815592r:149405534_149646005|GENSCAN_predicted_peptide_6|496_aa
XLQLNMSLLMISENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTYLQQKWQQV
WQEINVEAKHVKDIMKTLESFKLDSTPLKAAQHDLPASEGEVWSMPVPVERRPSPGPRKR
QSSQYSDPKSHGNRPSTTVRVHRSSAQNVHNDRGKAVRCREKKEQNKGREEKNKSPAAVT
EPETNKFDSTGYDKDLVEALERDIISQNPNVRWDDIADLVEAKKLLKEAVVLPMWMPEFF
KGIRRPWKGVLMVGPPGTGKTLLAKAVATECKTTFFNVSSSTLTSKYRGESEKLVRLLFE
MARFYSPATIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGTSENDDPSKMVMV
LAATNFPWDIDEALRRRLEKRIYIPLPSAKGREELLRISLRELELADDVDLASIAENMEG
YSGADITNVCRDASLMAMRRRIEGLTPEEIRNLSKEEMHMPTTMEDFEMALKKVSKSVSA
ADIERYEKWIFEFGSC

>gi568815592r:149405534_149646005|GENSCAN_predicted_CDS_6|1491_bp
nncttacagttgaacatgagtcttcttatgattagtgagaatgtaaaattggctcgtgaa
tatgcattgctgggaaactatgactctgcgatggtctattatcagggagttcttgaccaa
atgaacaagtatctgtactcagtcaaagatacatacctccagcagaaatggcaacaggtt
tggcaggaaataaatgtggaagctaaacatgttaaagatatcatgaaaacactagagagc
tttaaactggacagcactcccttgaaagcggcacagcatgaccttccagcttctgaggga
gaagtctggtccatgcctgtacctgttgaacgaagaccctcaccaggacctagaaaacgc
caatcttctcagtacagtgaccctaaatcacatggtaatcgtccaagtacaactgtcaga
gttcaccgttcatctgcacagaatgttcacaatgacagagggaaagctgttcgttgtcgt
gaaaagaaagaacagaataaaggaagagaggaaaagaacaaatcacctgctgcagtaaca
gaaccagagacaaataaatttgatagtaccggatatgataaagacttagtagaagctttg
gaaagagatataatttcccagaatcccaatgttcgatgggatgatatcgctgatttagta
gaagctaaaaagttgcttaaggaagccgtagtgttaccaatgtggatgcccgaattcttt
aagggcattaggagaccatggaaaggagtactgatggtcggcccacctggcacggggaag
acgctccttgctaaagcagtagctacagaatgcaagacaacattcttcaatgtctcttca
tcaactttgacttccaaatacagaggagaatctgagaagcttgttcgtcttctgtttgaa
atggctcgattttattctccagccaccatatttattgatgagatagactccatctgtagt
cgccgagggacttctgaagaacatgaagcaagcagaagggtgaaagcggagctgctggtt
cagatggatggtgttggaggtacttctgaaaatgatgacccttccaaaatggttatggtt
ctggcagctactaattttccctgggatatagatgaggctttaagacgacgccttgagaaa
cgaatctatattcctttgccgtcagcaaaaggcagggaggagctattacgaataagtcta
cgtgagttggaattggctgatgatgttgaccttgcaagtatagcagaaaacatggaaggt
tattcaggtgcggacattaccaacgtgtgcagggatgcgtccttgatggcaatgagaagg
cgcattgaaggtttgactccagaggaaatccgaaatctttccaaagaagaaatgcacatg
cctacaactatggaggatttcgagatggctttaaaaaaggtttctaagtcagtgtctgct
gcagacattgaaagatacgagaaatggatatttgagtttggatcatgctaa