GENSCAN 1.0	Date run:  8-Nov-116	Time: 00:56:48

Sequence gi568815592r:131600472_131801401 : 200930 bp : 38.00% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.14 PlyA -     22     17    6                               1.05
 1.13 Term -    339    194  146  1  2   45   54    76 0.214  -3.01
 1.12 Intr -   1910   1747  164  1  2   61   96   161 0.648  12.90
 1.11 Intr -   2733   2559  175  1  1  110   85    20 0.987   1.98
 1.10 Intr -   3849   3707  143  2  2  113   52    96 0.966   7.58
 1.09 Intr -   6153   6008  146  0  2   66   80    47 0.591  -0.14
 1.08 Intr -   9775   9575  201  1  0   61   95   166 0.930  13.16
 1.07 Intr -  18048  17936  113  1  2   52   95    48 0.587   1.08
 1.06 Intr -  19425  19356   70  0  1  110   46    39 0.596  -0.26
 1.05 Intr -  21508  21410   99  1  0   97   76    99 0.991   8.99
 1.04 Intr -  22991  22880  112  1  1   90   71    59 0.948   3.86
 1.03 Intr -  27201  27170   32  0  2  106   92    38 0.704   2.01
 1.02 Intr -  27637  27540   98  2  2   77   89    38 0.570   1.61
 1.01 Init -  27915  27720  196  0  1   75  103   133 0.607  10.75
 1.00 Prom -  29277  29238   40                              -6.05

 2.00 Prom +  32892  32931   40                              -7.95
 2.01 Init +  36914  36991   78  1  0   67   87    42 0.585   3.11
 2.02 Intr +  40984  41059   76  0  1   82   69    59 0.594   1.57
 2.03 Intr +  49556  49678  123  0  0   92   18   140 0.533   7.04
 2.04 Intr +  52071  52196  126  1  0   81  105    37 0.528   4.43
 2.05 Intr +  70777  70856   80  2  2   87  127    32 0.063   5.35
 2.06 Intr +  77224  77345  122  0  2   44   42    86 0.069  -2.03
 2.07 Intr +  77397  77469   73  0  1   84   89    97 0.748   7.89
 2.08 Intr +  82583  82691  109  1  1   72   68   118 0.995   7.14
 2.09 Intr +  84893  85024  132  0  0   72   81    62 0.921   3.60
 2.10 Term +  89432  89583  152  0  2   -1   43   191 0.004   2.79
 2.11 PlyA +  91417  91422    6                               1.05

 3.02 PlyA -  92720  92715    6                               1.05
 3.01 Sngl - 100930  99998  933  1  0   47   48   435 0.917  31.60
 3.00 Prom - 101074 101035   40                              -7.15

 4.02 PlyA - 101478 101473    6                               1.05
 4.01 Sngl - 110546 108213 2334  2  0   79   49  2065 0.738 194.12
 4.00 Prom - 114057 114018   40                              -6.45

 5.00 Prom + 114186 114225   40                              -4.95
 5.01 Init + 118262 118267    6  1  0   84   78     0 0.211  -0.47
 5.02 Intr + 119821 119908   88  0  1   62  103    10 0.541  -1.48
 5.03 Intr + 123569 123620   52  0  1  102  106    44 0.540   4.65
 5.04 Intr + 125814 125973  160  0  1   62   87    86 0.370   4.97
 5.05 Intr + 133117 133252  136  0  1   99   53    60 0.583   2.82
 5.06 Intr + 137560 137692  133  2  1   79  108   104 0.955  10.28
 5.07 Intr + 139753 139909  157  1  1    9   76   133 0.782   3.29
 5.08 Intr + 142327 142372   46  0  1  120   98   -19 0.032  -0.64
 5.09 Intr + 159850 159954  105  2  0  100   76    43 0.312   3.57
 5.10 Intr + 162053 162159  107  0  2  113   53     8 0.133  -1.19
 5.11 Term + 177992 178090   99  1  0  135   49    38 0.403   1.75
 5.12 PlyA + 178405 178410    6                               1.05

 6.04 PlyA - 178452 178447    6                               1.05
 6.03 Term - 180725 180634   92  0  2  100   48   112 0.531   5.30
 6.02 Intr - 183157 183053  105  2  0   59  109    63 0.472   4.77
 6.01 Init - 192461 192413   49  2  1   77   78    47 0.541   3.76

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term +  89847  89989  143  1  2   83   42   186 0.965  10.61
S.002 Term + 146315 146485  171  1  0   98   32    95 0.830   1.74


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:131600472_131801401|GENSCAN_predicted_peptide_1|564_aa
MPPGSLGSRFRLGALSSGLRAALLHRRNLLVAPLVSAGFANGAYRALPVFRTGSCCWLGS
GGNAPELESDPGLAGHPGKAGVIVQMETQLQSIFEEVVKTEVIEEAFPGLVCESLINSDT
LEWERTQLWALTFKLVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREL
LGNLVSDFVDTFRPTARINSICGRCSLLPVVNNSGAICNSWKLDPATLRFPLKGLLPYDK
HKQRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFASFPHM
VLSLHQKYIPVPDINKPQSTHAFAMTCIWIHLNRKAQNDNSKLQIPIPHSLRLHHDLIHS
IATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQLLPTVFKSHAWGILH
TLLEMFSYRMHHIQPHYRVQLLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQ
PQFTRFLSDPKTVLSAESEELNRALILTLARATHVTGPAVLPPLLLYRQCSYQVKKPDIF
LLLFDLIESLKGYWGIPKRSTDHT

>gi568815592r:131600472_131801401|GENSCAN_predicted_CDS_1|1695_bp
atgcctccggggtccttgggctcaaggttccgtttgggggcgctctcgtccggcttgcgg
gccgcccttctccacagacggaaccttctggtggcgccgctggtttctgcggggtttgca
aacggcgcgtaccgggcccttcccgtcttccgtacaggttcctgctgttggctgggctcg
ggagggaacgctccagagctcgagtctgatccgggccttgccgggcaccctggaaaggcg
ggggtgatagtacagatggagacgcaactgcagagcattttcgaagaggtggtgaaaacg
gaagttatagaagaggcttttcctgggctggtttgtgaatccctgataaactctgacact
cttgagtgggaaagaacacagctttgggccttaacatttaaactggttcggaaaataatt
gggggagtggattacaagggtgttcgagatctcttaaaagtgattttggagaagattttg
acaattcctaatacagtgagctctgctgttgtacagcagcttctggcagcaagagagtta
cttggaaacctagtatcagactttgtggataccttcaggcccacagcaaggataaactcc
atttgtggtcgctgtagtcttctgccagttgtaaataattcgggtgccatttgtaattca
tggaaactggatcctgctactcttcgttttcctttgaaaggccttttgccatatgataag
cacaagcagcgctgccctgtgctggaggaccagttggtggatctggttgtttatgccatg
gagcgatctgagaccgaggagaagtttgacgatgggggaacaagccaactcctgtggcag
catctctcaagtcagctcattttctttgtgcttttccagtttgcaagttttccacatatg
gtgctttctcttcatcagaagtatatcccagttcctgatattaacaaaccccagtcaacc
catgcctttgcaatgacctgtatttggattcatctcaatagaaaagctcaaaatgacaac
tccaagctacagattccaatacctcattccctaagacttcaccatgaccttattcacagc
attgcaaccagggtgataaaacttgctcatgcaaagtccagtgtggccttggctccagcc
ctagtggaaacttacagtcgtttattggtctatatggaaatagagtctttgggcatcaaa
ggatttatcagtcagcttttgccaactgttttcaaatcacatgcatgggggatcttacac
acactccttgagatgtttagctaccggatgcatcatattcagcctcattacagagttcag
ctcctgagtcatcttcatactttggctgcagttgcacaaacaaaccagaaccagctccat
ctttgtgtcgagagcactgctctcaggcttataacagcattaggtagctcagaggtacaa
ccgcagtttacacgcttccttagtgatcccaaaacagtgctctcagcagaatctgaagaa
ctgaaccgagccttgatattgaccttggctagagcaactcatgtaacaggaccagcagtt
ttaccaccattgcttttgtaccgtcagtgctcataccaagtgaaaaagcctgatatcttt
ttattattatttgacctcattgaatctttgaagggctattggggaatccccaagaggtct
acagaccacacttga

>gi568815592r:131600472_131801401|GENSCAN_predicted_peptide_2|356_aa
MESTLTLATEQPVKKNTLKKYKIACIVLLALLVIMSLGLGLGLGLRKLEKQGSCRKKCFD
ASFRGLENCRCDVACKDRGDCCWDFEDTCVESTRIWMCNKFRCGETRLEASLCSCSDDCL
QRKDCCADYKSVCQETCGIHSKYMRAMYPTKTFPNHYTIVTETYPCWSQVELLGLNKEEE
VREKEKAMASKPKIYKIPQSSLPRFYTMYFEEPDSSGHAGGPVSARVIKALQVVDHAFGM
LMEGLKQRNLHNCVNIILLADHGMDQTYCNKMEYMTDYFPRINFFYMYEGPAPRIRAHNI
PHDFFSWFMTSAEEVTTVVVKIERELESEMEPEAVTELLQSHEKTGTDEELLLTDE

>gi568815592r:131600472_131801401|GENSCAN_predicted_CDS_2|1071_bp
atggaatctacgttgactttagcaacggaacaacctgttaagaagaacactcttaagaaa
tataaaatagcttgcattgttcttcttgctttgctggtgatcatgtcacttggattaggc
ctggggcttggactcaggaaactggaaaagcaaggcagctgcaggaagaagtgctttgat
gcatcatttagaggactggagaactgccggtgtgatgtggcatgtaaagaccgaggtgat
tgctgctgggattttgaagacacctgtgtggaatcaactcgaatatggatgtgcaataaa
tttcgttgtggagagaccagattagaggccagcctttgctcttgttcagatgactgtttg
cagaggaaagattgctgtgctgactataagagtgtttgccaagaaacatgtggaattcat
tcaaaatacatgagagctatgtatcctaccaaaaccttcccaaatcattacaccattgtc
acggaaacctatccttgctggagccaagtagaactactgggtctgaacaaggaggaggag
gttagagagaaagaaaaggcaatggctagcaagcccaagatctacaaaatcccccaatcc
agcctacccaggttttataccatgtattttgaagaacctgattcctctggacatgcaggt
ggaccagtcagtgccagagtaattaaagccttacaggtagtagatcatgcttttgggatg
ttgatggaaggcctgaagcagcggaatttgcacaactgtgtcaatatcatccttctggct
gaccatggaatggaccagacttattgtaacaagatggaatacatgactgattattttccc
agaataaacttcttctacatgtacgaagggcctgccccccgcatccgagctcataatata
cctcatgacttttttagttggttcatgacttcagcagaggaagtaactacagtcgtggta
aaaatagaaagagaactagaatcagaaatggagcctgaagctgtgactgagttgctgcaa
tctcatgagaaaactggaacagatgaagagctgcttcttacggatgagtaa

>gi568815592r:131600472_131801401|GENSCAN_predicted_peptide_3|310_aa
MGDNITSIREFLLLGFPVGPRIQMLLFGLFSLFYVFTLLGNGTILGLISLDSRLHAPMYF
FLSHLAVVDIAYACNTVPRMLVNLLHPAKPISFAGRMMQTFLFSTFAVTECLLLVVMSYD
LYVAICHPLRYLAIMTWRVCITLAVTSWTTGVLLSLIHLVLLLPLPFCRPQKIYHFFCEI
LAVLKLACADTHINENMVLAGAISGLVGPLSTIVVSYMCILCAILQIQSREVQRKAFRTC
FSHLCVIGLVYGTAIIMYVGPRYGNPKEQKKYLLLFHSLFNPMLNPLICSLRNSEVKNTL
KRVLGVERAL

>gi568815592r:131600472_131801401|GENSCAN_predicted_CDS_3|933_bp
atgggagacaatataacatccatcagagagttcctcctactgggatttcccgttggccca
aggattcagatgctcctctttgggctcttctccctgttctacgtcttcaccctgctgggg
aacgggaccatactggggctcatctcactggactccagactgcacgcccccatgtacttc
ttcctctcacacctggcggtcgtcgacatcgcctacgcctgcaacacggtgccccggatg
ctggtgaacctcctgcatccagccaagcccatctcctttgcgggccgcatgatgcagacc
tttctgttttccacttttgctgtcacagaatgtctcctcctggtggtgatgtcctatgat
ctgtacgtggccatctgccaccccctccgatatttggccatcatgacctggagagtctgc
atcaccctcgcggtgacttcctggaccactggagtccttttatccttgattcatcttgtg
ttacttctacctttacccttctgtaggccccagaaaatttatcactttttttgtgaaatc
ttggctgttctcaaacttgcctgtgcagatacccacatcaatgagaacatggtcttggcc
ggagcaatttctgggctggtgggacccttgtccacaattgtagtttcatatatgtgcatc
ctctgtgctatccttcagatccaatcaagggaagttcagaggaaagccttccgcacctgc
ttctcccacctctgtgtgattggactcgtttatggcacagccattatcatgtatgttgga
cccagatatgggaaccccaaggagcagaagaaatatctcctgctgtttcacagcctcttt
aatcccatgctcaatccccttatctgtagtcttaggaactcagaagtgaagaatactttg
aagagagtgctgggagtagaaagggctttatga

>gi568815592r:131600472_131801401|GENSCAN_predicted_peptide_4|777_aa
MEEPGATPQPYLGLVLEELGRVVAALPESMRPDENPYGFPSELVVCAAVIGFFVVLLFLW
RSFRSVRSRLYVGREQKLGATLSGLIEEKCKLLEKFSLIQKEYEGYEVESSLEDASFEKA
AAEEARSLEATCEKLSRSNSELEDEILCLEKDLKEEKSKHSQQDELMADISKSIQSLEDE
SKSLKSQIAEAKIICKTFKMSEERRAIAIKDALNENSQLQTSHKQLFQQEAEVWKGQVSE
LNKQKITFEDSKVHAEQVLNDKENHIKTLTGHLPMMKDQAAVLEEDTTDDDNLELKVNSQ
WENGANLDDPPKGALKKLIHAAKLNVSLKSLEGERNHIIIQLSEVDKTKEELTEHIKNLQ
TQQASLQSENIYFESENQKLQQKLKIMTEFYQENEMKLYRKLTVEENYRIEEEEKLSRVE
EKISHATEELETYRKLAKDLEEELERTVHFYQKQVISYEKRGHDNWLAARTAERNLSDLR
KENAHNKQKLTERELKFELLEKDPNALDVSNTAFGREHSPCSPSPLGRPSSETRAFPSPQ
TLLEDPLRLSPVLPGGGGRGPSSPGNPLDHQITNERGEPSYDRLIDPHRAPSDTGSLSSP
VEQDRRMMFPPPGQSYPDSTLPPQREDRFYSNSERLSGPAEPRSFKMTSLDKMDRSMPSE
MESSRNDAKDDLGNLNVPDSSLPAENEATGPGLIPPPLAPISGPLFPVDTRGPFMRRGPP
FPPPPPGTMFGASRGYFPPRDFPGPPHAPFAMRNIYPPRGLPPYLHPRPGFYPNPTF

>gi568815592r:131600472_131801401|GENSCAN_predicted_CDS_4|2334_bp
atggaggagcctggtgctacccctcagccctacctggggctggtcctggaggagctaggc
agagttgtggcagcactacctgagagtatgagaccagatgagaatccttatggttttcca
tcggaactggtggtatgtgcagctgttattggattttttgttgttctcctttttttgtgg
agaagttttagatcggttaggagtcggctttatgtgggaagagagcaaaaacttggtgca
acgctttctggactaattgaagaaaaatgtaaactacttgaaaagtttagccttattcaa
aaagagtatgaaggctatgaagtagagtcatctttagaggatgccagctttgagaaggcg
gcagcagaagaagcacgaagtttggaggcaacctgtgaaaagctgagcaggtccaattct
gaacttgaggatgaaatcctctgtctagaaaaagacttaaaagaagagaaatctaaacat
tctcaacaagatgaattgatggcggatatttcaaaaagtatacagtctctagaagatgag
tcaaaatccctcaaatcacaaatagctgaagccaaaatcatctgcaagacatttaaaatg
agtgaagaacgacgggctatagcaataaaagatgctttgaatgaaaattctcaacttcag
acaagccataaacagctttttcagcaagaagctgaagtatggaaaggacaagtgagtgaa
cttaataaacagaaaataacatttgaagactccaaagtacacgcagaacaagttctgaat
gataaagaaaatcacatcaagaccctgactggacacttgccaatgatgaaagatcaggct
gctgtgcttgaagaagacacaacggatgatgataacctggaattaaaagtgaacagtcaa
tgggaaaatggtgctaacttagatgatcctccgaaaggagctttgaagaaactgattcat
gctgctaagttaaatgtttctttaaaaagcttagaaggagaaagaaaccacattattatt
cagttatctgaagtggacaaaacaaaggaagagcttacagagcatattaaaaatcttcag
actcaacaagcatctttgcaatcagaaaacatatattttgaaagtgagaatcagaagctt
caacagaaacttaaaataatgactgaattctatcaagaaaatgaaatgaaactctacagg
aaattaacagtggaggaaaattaccgaatagaggaagaagagaagctttctagagtggaa
gaaaagatcagccatgccactgaagagctggagacctatagaaagctagccaaagatctt
gaagaagaattggagagaactgttcatttttatcaaaagcaggttatttcctacgagaaa
agaggacatgataattggttggcagctcggactgctgaaagaaacctcagtgatttaagg
aaagaaaatgctcacaacaaacaaaaattaactgaaagagagttgaaatttgaactttta
gaaaaagatcctaatgcactcgatgtttcaaatacagcatttggcagagagcattcccca
tgtagtccctcaccattgggtcggccttcatctgaaacgagagcttttccctctcctcaa
actttgttggaggatccactcagactctcacctgtgcttccagggggaggaggaagaggc
ccaagcagcccagggaatcccctggaccatcagattaccaatgaaagaggagaaccaagc
tatgacaggttaatcgatcctcacagggctccttctgacactgggtccctgtcatctccg
gtggaacaggaccgtaggatgatgtttcctccaccagggcaatcatatcctgattcaact
cttcctccacaaagggaagacagattttattctaattctgaaagactgtctggaccagca
gaacccagaagttttaaaatgacttctttggataaaatggataggtcaatgccttcagaa
atggaatccagtagaaatgatgccaaagatgatcttggtaatttaaatgtgcctgattca
tctctccctgctgaaaatgaagcaactggccctggccttattcctccacctcttgctcca
atcagcggtccattgtttccagtggatacaaggggcccattcatgagaagaggacctcct
ttccccccacctcctccaggaaccatgtttggagcttctcgaggttattttccaccaagg
gatttcccaggtccaccacatgctccatttgcaatgagaaacatctatccaccgaggggt
ttacctccttaccttcatccgagacctggattttaccccaaccccacattctga

>gi568815592r:131600472_131801401|GENSCAN_predicted_peptide_5|362_aa
MEAIFLAHGPSFKEKTEVEPFENIEVYNLMCEYSAGTSESDAKSHPRRNRDSKGGNSLAC
SLQDNVQVLDKGCYRCYTGAKEEHIVFYLEKMENVYRPIGQLGDTSPLPPTVPDCLRADV
RVPPSESQKCSFYLADKNITHGFLYPPEMWDYFHSVLLIKHATERNGVNVVSGPIFDYNY
DGHFDAPDEITKHLANTDVPIPTHYFVVLTSCKNKSHTPENCPGWLDVLPFIIPHRPTNV
ESCPNFILFHLLKIPSGRQEFLFSKIDIINQVTVVLDLFGRCGKMLSLASERAQEMVLWA
DLCSTQNSYVEVLTPIPQNVTVFECRVFTEEIGVENHSVLGWQLSLYPDLSRAPSAPSRH
MT

>gi568815592r:131600472_131801401|GENSCAN_predicted_CDS_5|1089_bp
atggaggctatctttctggcacatggacccagttttaaagagaagactgaagttgaacca
tttgaaaatattgaagtctataacctaatgtgtgagtactcagctggaacaagtgaatca
gatgctaaatctcacccaagaagaaacagagattcaaagggagggaactcactggcctgt
agcttgcaagacaatgtgcaagtattagataaaggttgttataggtgctacacgggtgca
aaagaggaacacattgtgttttacctggagaaaatggaaaatgtttacaggccaattggc
caattgggagacacatcgcctctgcctcccactgtcccagactgtctgcgggctgatgtc
agggttcctccttctgagagccaaaaatgttccttctatttagcagacaagaatatcacc
cacggcttcctctatcctcctgaaatgtgggactacttccacagtgttcttcttataaaa
catgccacagaaagaaatggagtaaatgtggttagtggaccaatatttgattataattat
gatggccattttgatgctccagatgaaattaccaaacatttagccaacactgatgttccc
atcccaacacactactttgtggtgctgaccagttgtaaaaacaagagccacacaccggaa
aactgccctgggtggctggatgtcctaccctttatcatccctcaccgacctaccaacgtg
gagagctgtcctaatttcattcttttccatctgctaaaaattccatctgggcgtcaagaa
ttcctcttcagtaaaattgatattattaaccaagtcactgtggtgttggatctatttggg
agatgtggcaaaatgctgagtttggcctcagaacgggcacaggagatggtgttatgggct
gacttgtgttccactcaaaattcatatgttgaagtcctaaccccaataccccagaatgtg
actgtatttgaatgtagggtctttacagaggaaattggtgtggaaaatcactctgtcctg
ggatggcaactctccttgtatccagacttatccagagctccctctgctccctctaggcac
atgacttga

>gi568815592r:131600472_131801401|GENSCAN_predicted_peptide_6|81_aa
MQLVTVSLPFYQEKTGGEKLQMSILTTTKYVHSYHAFRDWGTGHFVNPWAPGLPTPPALI
KARRLGYKAKQDCRIRVRRGG

>gi568815592r:131600472_131801401|GENSCAN_predicted_CDS_6|246_bp
atgcagctggtgactgtgtctcttcccttttatcaagagaaaactggaggtgaaaaactc
caaatgagtattctgacaactaccaagtatgtccactcctatcatgcattcagagactgg
ggaactggacactttgtcaatccatgggctccagggctccccaccccacctgccctgata
aaagcacgccgactgggctacaaggccaagcaagattgtaggattcgtgttcgccgtggt
ggctga