GENSCAN 1.0	Date run:  7-Nov-116	Time: 22:16:54

Sequence gi568815592r:108112152_108360921 : 248770 bp : 43.24% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.04 PlyA -    468    463    6                              -0.45
 1.03 Term -   3865   3738  128  2  2   17   53   113 0.210  -0.86
 1.02 Intr -   5968   5764  205  1  1   53   32   144 0.194   4.07
 1.01 Init -   6491   6309  183  2  0   17   69   180 0.414   6.12
 1.00 Prom -  19923  19884   40                              -4.06

 2.00 Prom +  35069  35108   40                              -4.46
 2.01 Init +  43726  43762   37  0  1   65   93    37 0.052   2.10
 2.02 Intr +  54501  54639  139  1  1   83   39    75 0.077   1.62
 2.03 Intr +  56140  56250  111  1  0   50  100    91 0.732   5.99
 2.04 Intr +  57335  57465  131  2  2   79   70    71 0.874   4.74
 2.05 Intr +  58022  58108   87  0  0   64   43    71 0.492   0.14
 2.06 Intr +  59307  59452  146  1  2   97   82   190 0.991  19.30
 2.07 Intr +  62685  62772   88  2  1  125   41    91 0.990   7.64
 2.08 Intr +  64352  64587  236  0  2   69   82   336 0.610  28.51
 2.09 Intr +  65944  66090  147  0  0   81   80   170 0.977  15.93
 2.10 Intr +  68172  68268   97  2  1   45   99     8 0.776  -2.82
 2.11 Intr +  68656  68805  150  2  0   65  119   144 0.984  15.33
 2.12 Intr +  69395  69500  106  0  1   76   60   122 0.463   7.47
 2.13 Term +  75150  75312  163  0  1   90   43    87 0.456   1.81
 2.14 PlyA +  76079  76084    6                               1.05

 3.00 Prom +  79488  79527   40                              -7.46
 3.01 Init +  83204  83254   51  1  0   75   93    72 0.806   6.77
 3.02 Term +  93466  93528   63  0  0  122   40    62 0.262   2.69
 3.03 PlyA +  94753  94758    6                               1.05

 4.06 PlyA -  95332  95327    6                               1.05
 4.05 Term -  95703  95586  118  2  1   55   48    62 0.136  -3.09
 4.04 Intr - 102471 102347  125  0  2   58  108    70 0.509   5.38
 4.03 Intr - 110894 110799   96  2  0   86  116    64 0.972   9.21
 4.02 Intr - 148842 148609  234  0  0    8  100   408 0.652  31.89
 4.01 Init - 149074 148985   90  1  0   39   49   102 0.589  -0.11
 4.00 Prom - 167173 167134   40                              -3.66

 5.00 Prom + 168399 168438   40                              -2.86
 5.01 Init + 182929 183067  139  0  1   89   86    43 0.087   2.51
 5.02 Intr + 211674 211897  224  1  2   57  100   177 0.357  13.65
 5.03 Intr + 234837 234888   52  2  1   60  111     9 0.007  -1.12
 5.04 Intr + 243503 243604  102  0  0   63   80    58 0.144   2.65
 5.05 Intr + 244539 244669  131  1  2   43  103   115 0.615   8.91

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 140045 140235  191  0  2   27   48   226 0.915  10.11


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592r:108112152_108360921|GENSCAN_predicted_peptide_1|171_aa
MRKKRAPSRYLPLRAPQAAGPRQPGFSRRAGRPLRPLRPLPTAPAARRAHGLGGWVLARA
QRNFEGGNCSGAHGLGGGSPSLSLHRVWEGLKPKLLGLRRVRGRKVHARSLLSAAFPRSR
ALQANLCFWVLLGEKWCLSPFECAEAALVDQSVRAPPVDSFGFLDVQHQVD

>gi568815592r:108112152_108360921|GENSCAN_predicted_CDS_1|516_bp
atgcgaaagaaacgcgcccctagccggtacctcccgctccgggccccgcaggcggctggg
cctcgtcagcccgggttcagccgccgcgccggccgccccctgcgccccctgcgccccctg
cccacggcccccgcagcccggcgggcgcacggcctcggcggctgggtcctcgcgcgggcg
cagaggaacttcgagggcgggaactgctccggcgctcatggactcgggggcggcagcccg
agcctctccttgcaccgtgtctgggagggcctgaagcccaaactcctcgggctgagaagg
gtccggggccgcaaggtgcacgcgcggtccttgctgtcagcggcctttccgcgctctcgc
gctctgcaggccaacttgtgcttctgggttctcttgggtgaaaaatggtgcttgagtccc
ttcgagtgtgcagaagcagccctcgttgaccaaagcgtcagggcgcctccagtggacagt
tttgggttcctcgacgtccagcaccaggtggactga

>gi568815592r:108112152_108360921|GENSCAN_predicted_peptide_2|545_aa
MDMLSIATLANKGALQAGGQLESGGARRRGGRCRPGLGQRPPTAPPRDSQHEQASRINKP
PSSLAPGQALAYTPGSKEPRALSSFSGCGAPGALESATGKRTAGVTVLLGPKRGPWSGQR
ARVKQRMVVRYGNQVYRFQIPNPSAFGSSCRISGRPEAAGAQTGGLRIGRILDIPCKVCG
DRSSGKHYGVYACDGCSGFFKRSIRRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLE
VNMNKDAVQHERGPRTSTIRKQVALYFRGHKEENGAAAHFPSAALPAPAFFTAVTQLEPH
GLELAAVSTTPERQTLVSLAQPTPKYPHEVNGTPMYLYEVATESVCESAARLLFMSIKWA
KSVPAFSTLSLQDQLMLLEDAWRELFVLGIAQWAIPVDANTLLAVSGMNGDNTDSQKLNK
IISEIQALQEVVARFRQLRLDATEFACLKCIVTFKAVPTHSGSELRSFRNAAAIAALQDE
AQLTLNSYIHTRYPTQPCRFGKLLLLLPALRSISPSTIEEVFFKKTIGNVPITRLLSDMY
KSSDI

>gi568815592r:108112152_108360921|GENSCAN_predicted_CDS_2|1638_bp
atggacatgctcagcattgccacacttgccaataaaggagccttgcaggctggagggcag
ctggagagcggcggcgcccggcggcgaggcgggcgctgccggccgggactcgggcagcgc
ccaccaaccgctccgccccgggacagccagcatgagcaagccagccggatcaacaagcct
cctagctcgctcgccccgggacaggccctcgcctacacccctggaagtaaggagccccgg
gctctttcgtccttttcggggtgtggagcccctggggcccttgaaagtgccacagggaag
aggacagctggggtgacagtactgctgggccccaaacgtggaccctggagcggtcagagg
gcgcgtgttaagcagaggatggttgtaagatatggaaaccaagtttaccgcttccagatc
cccaacccaagcgctttcggcagcagctgtcgaatttcagggaggcctgaggccgctggg
gcccaaactggaggccttcggataggccgcattttagatatcccctgcaaagtgtgtggc
gaccgcagctcggggaagcactacggggtctacgcctgcgacggctgctcaggttttttc
aaacggagcatccgaaggaataggacctatgtctgcaaatctggaaaccagggaggctgt
ccggtggacaagacgcacagaaaccagtgcagggcgtgtcggctgaagaagtgtttggaa
gtcaacatgaacaaagacgccgtgcagcacgagcgggggcctcggacgtccaccatccgc
aagcaagtggccctctacttccgtggacacaaggaggagaacggggccgccgcgcacttt
ccctcggcggcgctccctgcgccggccttcttcaccgcggtcacgcagctggagccgcac
ggcctggagctggccgcggtgtccaccactccagagcggcagaccctcgtgagcctggct
cagcccacgcccaagtacccccatgaagtgaatgggaccccaatgtatctctatgaagtg
gccacggagtcggtgtgtgaatcagctgccagacttctcttcatgagcatcaagtgggct
aagagtgtgccagccttctccacgctgtctttgcaagaccagctgatgcttttggaagat
gcttggagagaactgtttgttctaggaatagcacaatgggccattccggttgatgctaac
actctactggctgtatctggcatgaacggtgacaacacagattcccagaagctgaacaag
atcatatctgaaatacaggctttacaagaggtggtggctcgatttagacaactccggtta
gatgctactgaatttgcctgtctaaaatgcatcgtcactttcaaagccgttcctacacat
agtggttctgaactgagaagtttccggaatgctgccgccattgcagcccttcaagatgag
gctcagctaacgctcaacagctacatccataccagatatcccactcaaccctgtcgcttt
ggaaaactcctgttgcttttgccagctttacgttctattagcccatcaactatagaagaa
gtgtttttcaaaaaaaccatcggcaatgtgccaattacaagactgctttcagatatgtac
aaatccagtgatatctaa

>gi568815592r:108112152_108360921|GENSCAN_predicted_peptide_3|37_aa
MAAEPDAMHPLRLPAAQPTQHEDEDEDLYGDPLPLNE

>gi568815592r:108112152_108360921|GENSCAN_predicted_CDS_3|114_bp
atggcagctgaacctgatgcaatgcaccctctgcggctccccgcagcccagcctactcaa
catgaagatgaggatgaagacctttacggtgatccacttccacttaatgaatag

>gi568815592r:108112152_108360921|GENSCAN_predicted_peptide_4|220_aa
MTPLLLTPQSAVPLPSLGRASREPGVAFQLQRRRRRLNAEGAEGARGGGSSYSEMAETVA
DTRRLITKPQNLNDAYGPPSNFLEIDVSNPQTVGVGRGRFTTYEIRVKTNLPIFKLKEST
VRRRYSDFEWLRSELERESKVVVPPLPGKAFLRQLPFRGDDGIFDDNFIEERKQGLEQFI
NKVSARNESDPVDSTSNTKHLIVQSANRQERSNTSHEKTH

>gi568815592r:108112152_108360921|GENSCAN_predicted_CDS_4|663_bp
atgacaccgcttctcctcacaccccagtccgcagtgcccctccccagcctcggccgggcc
tcccgggagccgggcgtggcgttccagctacagcggcggcggcggcggctgaacgcggag
ggggcggagggagcccgcggcggcggcagcagctacagcgaaatggcggagaccgtggct
gacacccggcggctgatcaccaagccgcagaacctgaatgacgcctacggaccccccagc
aacttcctcgagatcgatgtgagcaacccgcaaacggtgggggtcggccggggccgcttc
accacttacgaaatcagggtcaagacaaatcttcctattttcaagctgaaagaatctact
gttagaagaagatacagtgactttgaatggctgcgaagtgaattagaaagagagagcaag
gtcgtagttcccccgctccctgggaaagcgtttttgcgtcagcttccttttagaggagat
gatggaatatttgatgacaattttattgaggaaagaaaacaagggctggagcagtttata
aacaaagtgagtgccagaaatgaaagcgacccagtggactcaactagcaacaccaagcac
ttgattgtgcaaagtgctaacagacaggagagatcgaacaccagtcatgaaaagactcac
taa

>gi568815592r:108112152_108360921|GENSCAN_predicted_peptide_5|216_aa
MAASWSLLVTLRPLAQSPLRGRCVGCGAWAAALAPLATAPGKPFWKAYTVQTSESMTPTA
TSETYLKALAVCHGPLDHYDFLIKAHELKDDEHQRRVIQCLQKLHEDLKGYNIEAEGLFS
KLFSRSKPPRGLYVYGDVGTGKTMVMDMFYAYVEMKRKKRVHFHGFMLDVHKRIHRLKQS
LPKRKPGFMAKSYDPIAPIAEEISEEACLLCFDEFQ

>gi568815592r:108112152_108360921|GENSCAN_predicted_CDS_5|648_bp
atggcggcctcctggtcgctcttggttaccctgcgccccttagcacagagcccgctgaga
gggagatgtgttgggtgcggggcctgggccgccgctctcgctcctctggccaccgcccct
gggaagcccttttggaaagcctatacggttcagacatccgagagcatgaccccaactgcc
acttcagagacttatttgaaagctttggccgtttgccatggacctctggaccactatgat
tttctgatcaaagctcatgagctaaaggatgatgaacatcaaagaagagtcatacagtgt
ttgcagaaattacacgaggaccttaaaggatacaatatagaggcagaaggccttttttca
aagcttttttcaaggagcaaacctccaaggggcctgtatgtttatggagatgttggtaca
ggaaaaacaatggtgatggacatgttttatgcttatgtggaaatgaagaggaaaaaacgg
gttcattttcatggtttcatgctagatgtgcacaaaagaatacatcgccttaaacagagt
ttgccaaaaaggaaaccaggattcatggctaaatcatatgacccaatagctcccatagcc
gaagaaatcagcgaagaagcatgtctcctatgttttgatgaatttcag