GENSCAN 1.0	Date run:  6-Nov-116	Time: 04:11:02

Sequence gi568815592f:37157918_37431169 : 273252 bp : 43.74% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  12272  12740  469  1  1   21   97   516 0.784  38.48
 1.02 Intr +  12856  12962  107  2  2  113  117   215 0.991  26.83
 1.03 Intr +  13025  13114   90  1  0  -24  105   174 0.898   8.09
 1.04 Intr +  13208  13574  367  1  1  119   89   840 0.978  81.92
 1.05 Intr +  15079  15255  177  2  0   81   93   152 0.965  14.89
 1.06 Term +  16017  16174  158  1  2  132   43    28 0.910   0.80
 1.07 PlyA +  17447  17452    6                               1.05

 2.03 PlyA -  17561  17556    6                               1.05
 2.02 Term -  55041  54540  502  2  1  -38   42   593 0.003  36.05
 2.01 Init -  61113  60509  605  0  2   65   92   414 0.058  34.28
 2.00 Prom -  62999  62960   40                             -11.82

 3.00 Prom +  63028  63067   40                              -4.76
 3.01 Init +  64399  64876  478  0  1   72  117   140 0.590  11.12
 3.02 Term +  87731  87849  119  0  2  -21   38   324 0.846  15.20
 3.03 PlyA +  89451  89456    6                               1.05

 4.00 Prom +  92283  92322   40                              -2.06
 4.01 Init + 100001 100056   56  1  2   82   83    35 0.005   3.16
 4.02 Intr + 121387 121694  308  1  2   33   94   300 0.919  21.19
 4.03 Intr + 124268 124447  180  0  0   57   95    64 0.915   3.84
 4.04 Intr + 126432 126547  116  1  2    9   92   147 0.839   7.37
 4.05 Intr + 133326 133440  115  2  1  108   86    88 0.972  10.62
 4.06 Intr + 155001 155107  107  1  2   97   99   148 0.997  16.73
 4.07 Intr + 155899 155974   76  0  1   99   78   161 0.963  15.29
 4.08 Intr + 158786 158913  128  0  2   92   91   150 0.849  16.10
 4.09 Intr + 159194 159289   96  1  0   90  109    79 0.989  10.41
 4.10 Term + 165154 165297  144  0  0    7   38   146 0.742  -0.59
 4.11 PlyA + 165732 165737    6                               1.05

 5.06 PlyA - 166185 166180    6                               1.05
 5.05 Term - 166402 166375   28  0  1   87   48    44 0.050  -2.15
 5.04 Intr - 173476 173155  322  2  1  110   82   194 0.304  15.92
 5.03 Intr - 177249 177131  119  2  2   49   65    46 0.078  -1.49
 5.02 Intr - 185336 185282   55  0  1  129   81    28 0.163   4.24
 5.01 Init - 187692 187560  133  0  1   82   63    68 0.669   4.00
 5.00 Prom - 187816 187777   40                              -2.46

 6.00 Prom + 191548 191587   40                              -5.46
 6.01 Init + 196248 196358  111  2  0   69   80    93 0.789   6.83
 6.02 Intr + 202529 202657  129  1  0  104   87    77 0.940  10.09
 6.03 Intr + 210567 211301  735  2  0   81   81   284 0.766  18.64
 6.04 Intr + 213595 213657   63  0  0   78   78   100 0.982   6.91
 6.05 Intr + 216703 216792   90  0  0   80   79   118 0.999  10.29
 6.06 Intr + 219009 219116  108  2  0   79   76    65 0.889   4.88
 6.07 Intr + 223233 223437  205  2  1   69  113   142 0.798  13.57
 6.08 Term + 236591 236766  176  0  2   96   34   104 0.143   3.72
 6.09 PlyA + 236797 236802    6                               1.05

 7.03 PlyA - 238215 238210    6                              -0.45
 7.02 Term - 241530 241357  174  0  0   81   32    55 0.056  -3.04
 7.01 Init - 250364 250311   54  2  0   83   70    82 0.900   7.18
 7.00 Prom - 257962 257923   40                              -3.56

 8.02 PlyA - 258101 258096    6                               1.05
 8.01 Term - 260250 260144  107  1  2  133   54    24 0.243   2.07

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init + 109764 109782   19  2  1   73   83    34 0.856   1.58


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_1|455_aa
RPRWLRRPERSRWQRRRRDRQQQQQQQQQQPLASCPAALPHEPHEPLTPPFSALPDPAGA
PSRRQSRQRPQLSSDSPSAFRASRSHSRNATRSHSHSHSPRHSLRHSPGSGSCGSSSGHR
PCADILEVGMLLSKINSLAHLRAAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGS
VYSGIRVSDNLPPGRGNLTETLGFQVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS
GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC
HNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRY
HGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSDR
PTFEEIQNHPWMQDVLLPQETAEIHLHSLSPGPSK

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_1|1368_bp
cggccgcggtggctgaggaggcccgagaggagtcggtggcagcggcggcggcgggaccgg
cagcagcagcagcagcagcagcagcagcaaccactagcctcctgccccgcggcgctgccg
cacgagccccacgagccgctcaccccgccgttctcagcgctgcccgaccccgctggcgcg
ccctcccgccgccagtcccggcagcgccctcagttgtcctccgactcgccctcggccttc
cgcgccagccgcagccacagccgcaacgccacccgcagccacagccacagccacagcccc
aggcatagccttcggcacagccccggctccggctcctgcggcagctcctctgggcaccgt
ccctgcgccgacatcctggaggttgggatgctcttgtccaaaatcaactcgcttgcccac
ctgcgcgccgcgccctgcaacgacctgcacgccaccaagctggcgcccggcaaggagaag
gagcccctggagtcgcagtaccaggtgggcccgctactgggcagcggcggcttcggctcg
gtctactcaggcatccgcgtctccgacaacttgccgcccggacgagggaacctgacggag
accctgggcttccaggtggccatcaaacacgtggagaaggaccggatttccgactgggga
gagctgcctaatggcactcgagtgcccatggaagtggtcctgctgaagaaggtgagctcg
ggtttctccggcgtcattaggctcctggactggttcgagaggcccgacagtttcgtcctg
atcctggagaggcccgagccggtgcaagatctcttcgacttcatcacggaaaggggagcc
ctgcaagaggagctggcccgcagcttcttctggcaggtgctggaggccgtgcggcactgc
cacaactgcggggtgctccaccgcgacatcaaggacgaaaacatccttatcgacctcaat
cgcggcgagctcaagctcatcgacttcgggtcgggggcgctgctcaaggacaccgtctac
acggacttcgatgggacccgagtgtatagccctccagagtggatccgctaccatcgctac
catggcaggtcggcggcagtctggtccctggggatcctgctgtatgatatggtgtgtgga
gatattcctttcgagcatgacgaagagatcatcaggggccaggttttcttcaggcagagg
gtctcttcagaatgtcagcatctcattagatggtgcttggccctgagaccatcagatagg
ccaaccttcgaagaaatccagaaccatccatggatgcaagatgttctcctgccccaggaa
actgctgagatccacctccacagcctgtcgccggggcccagcaaatag

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_2|368_aa
MKQQQWCGMTAKMGTVLSGVFTIMAVDMYLIFEQKHLGNGSCTEITPKYRGASNIINNFI
ICWSFKIVLFLSFITILISCFLLYSVYAQIFRGLVIYIVWIFFYETANVVIQILTNNDFD
IKEVRIMRWFGLVSRTVMHCFWMFFVINYAHITYKNRSQGNIISYKRRISTAEILHSRNK
RLSISSGFSGSHLESQYFERQRMFSLMVGIFSVLNTTQFFIFDLNQKTHICYEAKFSIYV
DSKSELVTWTLFHRANISTGLSLTTIIIGCFLFYCIHKNIYMGLLIYAMWIITYELINFS
IVLLLNGIIKDHFKTLSYLHWIFQISHMLLHFFCLPFIVKHAYNLYKESQTVGRKRRHRL
CSTIAVNS

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_2|1107_bp
atgaaacagcagcagtggtgtgggatgactgccaaaatgggcaccgtgttgtcaggggtc
ttcaccatcatggccgtagacatgtatctcatctttgaacagaagcacctagggaatggc
agttgcactgagatcacaccaaagtacaggggtgcaagtaacatcataaataacttcatc
atctgctggagttttaaaatcgtcctcttcctgtctttcatcaccatcctcatcagctgc
ttcctcctgtactcagtgtatgcccagatcttcaggggcctggtcatctacattgtctgg
atttttttctatgaaactgcaaacgtcgtaatacaaatcctcaccaacaatgactttgac
attaaagaggtcagaatcatgcgctggtttggcttggtgtctcgtacagtcatgcactgt
ttctggatgttctttgtcatcaactatgcccacataacctacaaaaaccggagccagggc
aatataatttcctacaagagacgaatttctacagcggagattctccacagcagaaataaa
agattatcaatttcgagtgggttcagtggctcacacctggaatcccagtactttgagagg
cagaggatgttctccctcatggtgggcatcttctctgtccttaataccacccagttcttc
atctttgacctgaaccagaagacacacatttgctatgaggccaagttcagcatctacgtg
gactcaaagtcggagctagtcacttggaccctgttccacagggctaatatcagcactggc
ctctccctcaccaccatcatcatcggctgcttcctcttttattgtatccacaagaatatc
tacatggggctgctgatctatgccatgtggatcatcacttacgagctcatcaacttctcc
atagtcctgctcctcaacgggatcatcaaagatcacttcaagacgctgagttatttgcac
tggatcttccaaatctcacacatgctcctgcactttttctgtctgcccttcatcgtcaag
catgcatacaacctttacaaggaatcccagactgtgggcaggaaacgccgccacaggctc
tgctccaccattgcagtgaactcatga

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_3|198_aa
MAPPGLDPNPAPRFELVPGLERGQAAGADIREPAGTAGSRGRGPPGVPEGAGCRDARVLH
LGGPAPLTRKGRVSYLSLAPACSVKWEAQVCSRGSWQLQLHLGGQILPIPGPPPRAQGGF
DAQPQFGQLQPAQEGGTSACSVEPEVGSTALVWAAAVAPAKTPTQNNSDNKEEEEQEEEE
EEEQEEDEEEEEMEEEIY

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_3|597_bp
atggcccccccagggctcgaccccaacccggctccgagatttgaactggtgccgggattg
gagagaggccaggcagcgggagcagacatccgggagcctgcagggacggcaggaagccgg
ggaagggggcctcctggggtccccgagggtgcaggctgcagagacgcccgggtcctgcac
ctaggaggtcccgccccgctaactcgaaaggggcgggtctcctacttgtccctggctcct
gcctgctcagtgaagtgggaggcccaggtctgcagccgtgggtcctggcagctgcagctg
cacctgggagggcagatcctgcctattcccggccctcctccaagagcacagggaggcttc
gatgcacagccacagtttgggcagctgcagcccgcccaagagggcgggacttctgcctgc
tccgtagagccggaggtggggtctacggctttggtttgggcggctgcagtagcacccgca
aaaacaccaacacagaacaacagtgacaataaggaagaggaggagcaggaggaggaggag
gaggaagagcaggaggaggacgaggaggaggaggagatggaggaggagatctactag

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_4|441_aa
MAAENSKQFWKRSAKLPGSFIKERSKVNTVPLKNKKASSFHEFARNTSDAWDIGDDEEED
FSSPSFQTLNSKVALATAAQVLENHSKLRVKPERSQSTTSDVPANYKVIKSSSDAQLSRN
SSDTCLRNPLHKQQSLPLRPIIPLVARISDQNASGAPPMTVREKTRLEKFRQLLSSQNTD
LANTERRKLTLQRKREEYFGFIEQYYDSRNEEHHQDTYRQIFERILFIWAIRHPASGYVQ
GINDLVTPFFVVFLSEYVEEDVENFDVTNLSQDMLRSIEADSFWCMSKLLDGIQDNYTFA
QPGIQKKVKALEELVSRIDEQVHNHFRRYEVEYLQFAFRWMNNLLMRELPLRCTIRLWDT
YQSEPEGFSHFHLYVCAAFLIKWRKEILDEEDFQSSRESSSSSSSSEAQNMGAQEDVSRR
QQGLRGLRMEFEKHHAGHSED

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_4|1326_bp
atggccgctgagaacagcaagcagttttggaagaggagcgctaagctgccggggagtttc
attaaagaacgatcaaaagtcaacacagttcctctgaagaataagaaggcctccagtttt
catgagtttgcacggaataccagtgatgcttgggacattggcgatgatgaggaagaggac
ttttcctcaccttctttccaaactctgaactcaaaagttgctttggcaactgcagcccaa
gttctagaaaaccacagcaagctgagagtaaaaccagaacggtcccagtcaacgacatcg
gacgtccctgccaactacaaggtcataaagtccagcagtgatgcccagctgtccagaaac
tctagtgatacatgcctgaggaacccactccacaaacagcaatcactccctctccggccc
atcatccccctcgttgcccggatctcggatcagaacgcttctggggcccccccaatgact
gtccgggagaaaacccgcctagaaaaattccgtcaacttctctccagccagaacactgac
ttagcaaacactgagaggaggaagttgaccctgcagcggaagcgggaggaatattttggc
ttcattgaacagtattatgactctcgaaacgaggaacatcaccaggatacctacagacag
atctttgaaagaattctatttatttgggccatccgccaccctgccagtgggtatgtccag
ggaattaatgacctggtcactccattctttgtcgtcttcctctcagaatatgtggaagag
gatgtggagaactttgacgtgaccaacttgtctcaagacatgctgcgaagcattgaggct
gacagcttttggtgcatgagcaagctgctggatggaatccaggataactacacctttgca
caaccaggaatccagaagaaggtgaaggcactggaagagcttgtcagccggattgatgag
caggtacataatcacttcaggaggtacgaggtagaatacctgcagtttgccttccgctgg
atgaacaacctgcttatgcgggagcttcctcttcgctgcaccatccgcctgtgggacaca
tatcagtctgaaccagaagggttctcccactttcatctctacgtgtgtgcagccttcttg
atcaagtggaggaaagagatcttggatgaggaggattttcagtcatctcgggaaagcagc
agcagcagcagcagcagcgaagcccagaacatgggagcccaggaagatgtcagcaggcgc
cagcaaggcctcagagggctcaggatggaatttgagaagcaccatgcagggcactctgag
gactaa

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_5|218_aa
MGYYAAIKKDEFMSFVGTWMKLETIILSKLSQGQKSKRRMFSLIGLGVLCIEKAKQGKRE
WGRLILWEAHLFHHESKIITLASMAASKTVSNQEISVGHPERELGPSTRHGILTVVQVTH
PETWSGGCQKVKTWAVGVSFVQQEWFLAGVHGSHSGHSDQTAIRDEGSLGPRRRQHLSAV
VIWGIGKHVLESVCLGEKQPNFFVAPVYCSHQCDPAGD

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_5|657_bp
atgggatactatgcagccataaaaaaggatgagttcatgtcttttgtagggacatggatg
aagctggaaaccatcattctcagcaaactatcgcaaggacaaaaaagcaaacgccgcatg
ttctcactcatagggcttggagtcctctgcatcgagaaagcaaaacaagggaagagagaa
tggggaaggctgatactgtgggaagctcatctttttcatcatgaatctaaaatcatcacc
ttggcatctatggcagcttctaaaactgtctccaaccaggaaattagtgttggacatcct
gagagagaactgggcccatccacgcggcatggaatactgacagtggtccaagtgacacat
ccagagacatggagtggtggatgccagaaagttaagacctgggcggtgggtgtgagcttt
gtacaacaggagtggttcctggccggggtccacggctcgcacagtggccacagtgatcag
actgccatcagagatgaaggcagtctgggtccccggaggagacagcacctatcggcggta
gtgatttggggcatcggcaaacatgtacttgagtctgtatgcctcggcgagaagcagccc
aatttcttcgttgccccagtgtattgtagccaccagtgtgacccagctggtgactaa

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_6|538_aa
MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMIS
RNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAEY
EYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKVS
CESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSS
ASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQLC
AEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKKD
FEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAH
SFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRERK
ASPNNVPVMGYLSSSSRQAVSPACCCFTTFQMPTSSNFQSHYLCCPLSFRLCEYFNLL

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_6|1617_bp
atgggggagcccggcttcttcgtcacaggagaccgcgccggtggccggagctggtgcctg
cggcgggtggggatgagcgccgggtggctgctgctggaagatgggtgcgaggtgactgta
ggacgaggatttggtgtcacataccaactggtatcaaaaatctgccccctgatgatttct
cgaaaccactgtgttttgaagcagaatcctgagggccaatggacaattatggacaacaag
agtctaaatggtgtttggctgaacagagcgcgtctggaacctttaagggtctattccatt
catcagggagactacatccaacttggagtgcctctggaaaataaggagaatgcggagtat
gaatatgaagttactgaagaagactgggagacaatatatccttgtctttccccaaagaat
gaccaaatgatagaaaaaaataaggaattgagaactaaaaggaaattcagtttggatgaa
ttagcaggtcctggagctgaaggcccctcaaatttgaaatccaaaataaataaagtgtct
tgtgaatctggtcagccagtgaaatcacaggggaaaggtgaagtggccagtacaccctct
gacaatttggatcctaagttgactgcccttgagccaagtaagaccacaggggctcccatt
taccctggcttccccaaagtcacagaggttcatcatgagcagaaagcctcaaactcttca
gcatctcagagaagcttacagatgtttaaggtgaccatgtccaggattctgaggctcaaa
atacagatgcaggaaaaacatgaagccgttatgaatgtgaaaaagcagacccaaaagggg
aactcaaagaaagttgtgcaaatggagcaggaacttcaggacttacagtcccagctgtgt
gcagagcaggctcagcagcaggcaagagtggagcaactagagaagactttccaggaagag
gaacagcatcttcagggtttggagatagcccaaggagaaaaggacctgaagcaacagctg
gcccaggctctgcaggagcattgggctctaatggaagagctaaatcgcagcaagaaggac
tttgaagcaatcattcaagccaagaacaaagaattagagcagaccaaggaagagaaggag
aagatgcaagcacagaaggaagaagttcttagccacatgaatgatgtgctagagaatgag
ctccaatgtattatttgttcagaatacttcattgaggctgtcaccttgaactgtgcccac
agtttctgctcctactgtatcaatgaatggatgaagcggaagatagaatgccccatttgt
cggaaggacattaagtccaaaacgtactctttggttctggacaattgcattaataagatg
gtaaataatctgagctcagaagtgaaagaacgacgaattgttctcattagggaacgaaaa
gcatccccaaacaatgtaccagtgatgggctacctgagctcatctagtcgccaagcagta
tctcctgcttgctgctgctttactacattccagatgcccacctcatccaatttccagagc
cactatctctgctgtccactttccttcaggctctgtgaatacttcaacctgctgtga

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_7|75_aa
MAEGKGEADTFFMGRQNRDPSDHLYIHESHICITKPALTSALSTLLRSHKILMIDTFSST
QGQQLLHVLIWAVIS

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_7|228_bp
atggcagaaggcaaaggagaagcagataccttcttcatggggcggcagaacagagacccc
agtgaccatctatacatccatgagtctcacatttgtatcaccaagccagctctcacctct
gcactctcaactctgctgagaagccacaaaatccttatgattgacaccttctcctccacc
caagggcagcagctccttcatgtcctcatatgggcagtgatttcataa

>gi568815592f:37157918_37431169|GENSCAN_predicted_peptide_8|35_aa
XAHNEGRPWPTERRWPSVSQEENSHQNLTMLAAEL

>gi568815592f:37157918_37431169|GENSCAN_predicted_CDS_8|108_bp
ngtgcacacaatgaaggaaggccatggcccacagagagaagatggccatctgtaagccag
gaagaaaactcccaccagaacctgaccatgctggctgcagaattgtga