GENSCAN 1.0	Date run:  5-Nov-116	Time: 09:41:01

Sequence gi568815592f:138722747_138923796 : 201050 bp : 40.90% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.02 PlyA -    284    279    6                               1.05
 1.01 Sngl -   8076   7564  513  0  0   39   36   310 0.770  16.69
 1.00 Prom -  10389  10350   40                              -6.15

 2.00 Prom +  13414  13453   40                              -8.05
 2.01 Init +  15170  15244   75  1  0   62  107    53 0.402   5.74
 2.02 Intr +  19080  19284  205  2  1   87   94    68 0.189   5.15
 2.03 Term +  28354  28460  107  2  2   85   48    43 0.045  -2.41
 2.04 PlyA +  29410  29415    6                               1.05

 3.00 Prom +  33922  33961   40                              -4.85
 3.01 Init +  50929  51156  228  0  0   49   91   140 0.990   7.14
 3.02 Intr +  53333  53464  132  1  0   67   81    92 0.672   6.32
 3.03 Term +  54533  54667  135  1  0   77   46    83 0.027   0.04
 3.04 PlyA +  54973  54978    6                               1.05

 4.00 Prom +  55427  55466   40                              -5.85
 4.01 Init +  57080  57239  160  1  1   50   99    72 0.016   4.54
 4.02 Intr +  62481  62635  155  1  2   49   95   158 0.992  11.47
 4.03 Term +  68843  68923   81  1  0  121   40    47 0.379  -0.09
 4.04 PlyA +  70550  70555    6                               1.05

 5.07 PlyA -  71321  71316    6                               1.05
 5.06 Term -  73130  72955  176  0  2   83   48   153 0.407   7.74
 5.05 Intr -  74770  74671  100  1  1   79   87    34 0.087   1.16
 5.04 Intr -  83409  83288  122  1  2   16   56   126 0.034   1.49
 5.03 Intr -  87198  87027  172  0  1   84   50    92 0.237   3.59
 5.02 Intr -  98119  98040   80  2  2   56   47    99 0.293   0.95
 5.01 Init -  98662  98476  187  1  1   85   50   134 0.685   8.57
 5.00 Prom -  99043  99004   40                             -12.03

 6.00 Prom +  99832  99871   40                              -8.05
 6.01 Sngl + 100001 101053 1053  1  0  105   43   457 0.994  39.79
 6.02 PlyA + 101109 101114    6                               1.05

 7.00 Prom + 101806 101845   40                              -6.65
 7.01 Init + 104383 104387    5  0  2   76   55     0 0.400  -4.98
 7.02 Intr + 107532 107652  121  0  1   70   73    93 0.445   5.58
 7.03 Intr + 110658 110843  186  2  0   53   55    84 0.120   0.56
 7.04 Intr + 120233 120485  253  1  1   74   89   164 0.304  11.18
 7.05 Intr + 121666 121834  169  2  1  105  103    71 0.965   8.38
 7.06 Intr + 123793 123931  139  1  1   86   65    49 0.769   1.95
 7.07 Intr + 126523 126688  166  0  1   65  102   164 0.779  14.11
 7.08 Intr + 131280 131408  129  1  0  107   71   125 0.662  12.45
 7.09 Term + 134934 134986   53  1  2  106   36    31 0.170  -3.69
 7.10 PlyA + 135727 135732    6                               1.05

 8.00 Prom + 136398 136437   40                              -5.35
 8.01 Init + 142275 142432  158  2  2   55   87   192 0.968  15.27
 8.02 Intr + 145334 145460  127  2  1   44   84   121 0.969   7.06
 8.03 Intr + 147486 147572   87  2  0    9   98    91 0.643   1.45
 8.04 Intr + 153726 153812   87  2  0   90  107    53 0.977   6.65
 8.05 Intr + 158211 158425  215  2  2   88   97    99 0.337   7.39
 8.06 Intr + 162928 163084  157  1  1   47   77   162 0.968  10.09
 8.07 Intr + 166197 166285   89  2  2   87   92    18 0.461  -0.05
 8.08 Intr + 175812 175925  114  0  0   58   99    90 0.826   5.74
 8.09 Intr + 178202 178374  173  2  2   77   31   177 0.979   9.56
 8.10 Term + 179754 179881  128  1  2   69   53   127 0.985   4.76
 8.11 PlyA + 181363 181368    6                               1.05

 9.09 PlyA - 181569 181564    6                               1.05
 9.08 Term - 182386 182318   69  1  0   95   46    43 0.788  -2.24
 9.07 Intr - 184854 184749  106  2  1   90   85    80 0.958   7.20
 9.06 Intr - 186070 185922  149  1  2   48   89   159 0.996  10.11
 9.05 Intr - 188625 188530   96  0  0   50   56   134 0.972   5.69
 9.04 Intr - 190204 190019  186  1  0   37   77   289 0.899  21.66
 9.03 Intr - 194142 194030  113  1  2   81   -8    69 0.073  -4.22
 9.02 Intr - 197570 197469  102  0  0   58   97    60 0.859   3.13
 9.01 Intr - 198378 198291   88  0  1  103   91    82 0.707   8.62

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr +  57076  57239  164  1  2   87   99    76 0.974   7.30


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_1|170_aa
MYGNTWMPRQKFAAGALPSWRTSARTVQKGNVGSEPPHRVPTGAPPSGALRRGPPSSRPQ
NGRSTNSLHCAPGKATDTQHQPVKATGGREVVPCKATGVELPKTMGTHLLHQRDLDVRPG
VKGDHFGTLKFDCHWISDLHGPCNPFVLSNFYHLEWLYLPNTSTPIVSRK

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_1|513_bp
atgtatggaaacacctggatgcccaggcagaagtttgctgcaggggcgttgccctcatgg
agaacctctgctaggacagtgcagaagggaaatgtggggtcagagcccccacatagagtc
cctactggggcaccacctagtggagccttgagaagagggccaccgtcctctagaccccag
aatggtagatccaccaacagcttgcactgtgcgcctggaaaagccacagacactcaacac
cagcctgtgaaagcaactggaggaagggaggttgtaccctgcaaagccacaggggtggag
ctgcccaagaccatgggaacccacctcttgcatcagcgtgatttggatgtgagacctgga
gtcaaaggagatcattttggaactttaaaatttgattgccactggatttcggatttgcac
gggccctgtaacccctttgttttgtccaatttctaccatttggaatggctgtatttaccc
aataccagtacacccattgtatctagaaagtaa

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_2|128_aa
MKRKRSSFPVAVEKYMLKNQAQDSTTSRQPLRNIPDTQICLTPSLLALGGLHSPTFSFPK
SHPCMGGFVGQSTVLQGSALRPSPPRSLPFLLPPLYKLLVPLFSFTLKYSELCIWIQAQC
KKPKKDFL

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_2|387_bp
atgaaaagaaaacgatcctcatttcctgtagctgtagagaaatatatgctgaaaaatcag
gcccaggattcaacgacctctcgccagcccctaaggaatattccagatacacagatctgt
ctgacaccctccttactggcacttggaggtcttcacagtcccacattttcctttcccaaa
tctcacccatgcatgggaggcttcgtgggtcagagcacagttttgcaaggttcagctcta
agaccatctcctccaaggagccttccctttctcctcccacctctttataaactactggtg
ccattgttcagcttcactttaaagtattcagagctctgcatttggattcaggcacaatgt
aagaaacccaagaaggattttctttga

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_3|164_aa
MPRAEPRATLGEQEKAGLPLGAWRLYLLRHFRKQTELRRSGSRDVTGALLVAAAVASEAV
GSLRVAEGGPNTLLLQVLRSWPWCNKELKTMEERKVKRRSPKSFSAHCTQVVNAKKNAIP
KGHNQRQEKIWKKYSNEYQMINSSFEDFLRINYQNGVFVMEEFN

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_3|495_bp
atgccgagggcggagccaagagcgacactgggggagcaggaaaaggcggggcttccgctt
ggggcatggaggctgtacctcttacgtcacttccgtaaacaaacggagctgcggaggagc
gggtcccgggatgtgaccggggctctgcttgtggctgcggcggtggcttctgaggctgtc
gggtctttgcgggttgcggaagggggccccaatacccttcttcttcaggtcttaagaagc
tggccgtggtgcaataaggaacttaaaacaatggaagagcggaaagtgaagaggaggagt
cctaagtcttttagtgcccactgtactcaggttgtcaatgccaaaaaaaatgccattcca
aagggacataaccaaagacaagagaagatttggaagaagtattccaatgagtaccaaatg
ataaacagcagttttgaggatttccttcgaataaattatcagaatggggtttttgtcatg
gaagagtttaattag

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_4|131_aa
MKEKTKPQGGEGKGAQSTPIQHSFLTDVSDVQEMERGLLSLLNDFHSGKLQAFGNECSIE
QMEHVRGMQEKLARLNLELYGELEELPEDKRKTASDSNLDRLLSDAGFLDAQETHHVHSH
HNAFVQVVPPT

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_4|396_bp
atgaaagaaaagaccaaacctcagggtggagagggcaaaggcgctcagtcaactccgatc
cagcactccttcctcactgatgtctcagatgttcaggagatggagagagggctgctcagt
cttttgaatgatttccactctggaaaacttcaagcatttggaaatgaatgttccattgaa
cagatggaacatgttcggggaatgcaggagaaattagctcgcttgaatttggagctctat
ggggagttagaggaacttcctgaggataagagaaaaacagccagtgactccaatctggat
aggcttctgtcagatgctggttttctggatgcccaagaaacacatcatgttcattctcat
cataatgcgtttgttcaggttgtacctcctacctag

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_5|278_aa
MATEAEQRRRKKEAIGFTTEALQEASAAGRPISGVFNDVRTNYFLHYSHQVRAAWSETHS
KAKGSSIADPNANADIKFKALNVCIMVLEVFHNNFMLSDWMVMPHNIECVAVVMETSYSW
NRFLYLLNVQGRNNTTLTQNLPENRKSLQIERSYEQGASFATGPDGDHKRLGFKPHTIIG
RPFGGVLVICYTAGEMQVSLVLLHYSRQSGLEIKTLLLGRGSLRWEKASVGSRGSRHVSE
ALRGAQQRCQTQGRGTPRRDLDTEANVCLISNKASDVN

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_5|837_bp
atggctacagaggcagaacagaggcgcaggaagaaagaagccattggtttcactacggaa
gcactgcaagaagcttcagctgcaggaagacccatatctggagttttcaatgatgtgaga
acaaactatttccttcattattcacatcaagttcgggctgcctggagtgaaacacattct
aaagccaaaggaagcagcatagcagatcctaatgctaatgccgacatcaaattcaaagca
ctgaatgtgtgtatcatggtcttagaagtcttccacaacaatttcatgctgtcagactgg
atggtaatgccacataatatagaatgtgttgctgttgttatggaaacatcctactcctgg
aaccgatttctgtatctactaaacgttcaaggaagaaataacactacacttacacaaaat
cttccagagaatagaaaaagtctccagattgagaggagttatgaacaaggagcctcattt
gcaactggacctgacggagatcacaagagactgggcttcaagcctcataccataattgga
agaccctttggtggtgtcttggttatctgttatacagctggagaaatgcaagttagtctg
gtccttctccactacagtagacagagtggcttagaaattaaaacactgctcctcggcaga
gggagcttgcggtgggagaaagcttccgtggggtcccgtgggtcgcggcacgtctcggaa
gccctgcgaggtgcccagcagaggtgccagacccaaggccgtgggaccccaagaagagac
ttggacactgaagccaacgtttgcttgatctcaaacaaagccagcgatgttaattaa

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_6|350_aa
MALEQNQSTDYYYEENEMNGTYDYSQYELICIKEDVREFAKVFLPVFLTIAFVIGLAGNS
MVVAIYAYYKKQRTKTDVYILNLAVADLLLLFTLPFWAVNAVHGWVLGKIMCKITSALYT
LNFVSGMQFLACISIDRYVAVTNVPSQSGVGKPCWIICFCVWMAAILLSIPQLVFYTVND
NARCIPIFPRYLGTSMKALIQMLEICIGFVVPFLIMGVCYFITARTLMKMPNIKISRPLK
VLLTVVIVFIVTQLPYNIVKFCRAIDIIYSLITSCNMSKRMDIAIQVTESIALFHSCLNP
ILYVFMGASFKNYVMKVAKKYGSWRRQRQSVEEFPFDSEGPTEPTSTFSI

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_6|1053_bp
atggctttggaacagaaccagtcaacagattattattatgaggaaaatgaaatgaatggc
acttatgactacagtcaatatgaattgatctgtatcaaagaagatgtcagagaatttgca
aaagttttcctccctgtattcctcacaatagctttcgtcattggacttgcaggcaattcc
atggtagtggcaatttatgcctattacaagaaacagagaaccaaaacagatgtgtacatc
ctgaatttggctgtagcagatttactccttctattcactctgcctttttgggctgttaat
gcagttcatgggtgggttttagggaaaataatgtgcaaaataacttcagccttgtacaca
ctaaactttgtctctggaatgcagtttctggcttgcatcagcatagacagatatgtggca
gtaactaatgtccccagccaatcaggagtgggaaaaccatgctggatcatctgtttctgt
gtctggatggctgccatcttgctgagcataccccagctggttttttatacagtaaatgac
aatgctaggtgcattcccattttcccccgctacctaggaacatcaatgaaagcattgatt
caaatgctagagatctgcattggatttgtagtaccctttcttattatgggggtgtgctac
tttatcacggcaaggacactcatgaagatgccaaacattaaaatatctcgacccctaaaa
gttctgctcacagtcgttatagttttcattgtcactcaactgccttataacattgtcaag
ttctgccgagccatagacatcatctactccctgatcaccagctgcaacatgagcaaacgc
atggacatcgccatccaagtcacagaaagcattgcactctttcacagctgcctcaaccca
atcctttatgtttttatgggagcatctttcaaaaactacgttatgaaagtggccaagaaa
tatgggtcctggagaagacagagacaaagtgtggaggagtttccttttgattctgagggt
cctacagagccaaccagtacttttagcatttaa

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_7|406_aa
MRGGQAFSKRPDSNNLRPCGPCDPCFNDLALPMQYEGHHRQYEKPLEDELLDPKAHLYGH
RYLSLTNLSSFSCNSGVAQMPMVPLALVSSPFGPIKTCTRGSPEDCLWMPKCVKFGWFLP
YTPTDNEYGAWKRHYIACVSHLDWLTPREAAATYGTLNEPKTEDEELLERQREKCLRKRI
WEKIALRKKELFKVRPPWVSGTCCSSVLKPRCQPRLSQTVRERVGLHEALEKQLVLTSLE
TLPKRSNISGSHSYPLLSKKNWHGVHKNDDRSSYALRPHFMLISSRIPAYEMVMESVKAG
VVSVVYEHSVTLESLLYLIEKALDGQKAQSIGIFSDGDSREINLLQGYKIGVKNLLRPEV
RDFWEKLGSYVATEEEGGHVDFFVPLGASVPSSQSPLQALLSLQDP

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_7|1221_bp
atgaggggtggacaagctttttctaaacggccagatagcaacaatcttaggccttgtggg
ccctgtgatccctgcttcaacgacttagctttaccgatgcagtatgaaggccaccacagg
caatatgaaaaacccctagaagacgaattgttggatccaaaagcacatttgtacggccat
cggtatttgtcacttaccaacttgtcttccttttcatgcaactcaggagttgcacagatg
cctatggttccccttgcccttgtgtcatctccttttggccccattaaaacatgcaccaga
ggatcacctgaggattgcttatggatgcccaaatgcgttaagttcggatggtttctgccc
tatactccaacagataatgagtatggtgcttggaagcgccattacattgcttgtgtgtcc
cacttagactggctgacacctagggaggctgctgctacttatgggacgctgaatgaaccc
aaaacagaagatgaggaactactggagagacaaagagaaaagtgcctgaggaaaagaatt
tgggagaaaattgcactacgtaagaaggagttattcaaagttcgacccccttgggtgagt
ggaacttgctgctctagcgtgctaaagcccagatgccaaccacgcctctcccagactgta
agggagcgagtgggattacatgaagctttggagaaacagcttgttttgacatcgttagaa
accttgcccaagcgaagcaatatttctggaagccattcctaccctttattatcaaagaaa
aattggcatggagttcataaaaatgatgacagatcttcatatgctctccggccacacttc
atgttaatatcatcccggattcctgcgtatgagatggtgatggagagtgtgaaggctggt
gttgtttctgtggtatatgaacacagcgtaaccttggaaagccttctgtatcttatagaa
aaagctctggatgggcagaaggcacagagcatcggaatatttagcgatggagacagcaga
gaaatcaatttactccaaggctataaaattggtgttaaaaatttactgaggcctgaagtg
agagatttctgggagaaattaggaagctatgtggccactgaagaagaagggggtcacgtg
gacttcttcgtgccccttggagcatcagtgccctcttctcaatctcctttgcaggctctt
ctttctctgcaagatccttaa

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_8|444_aa
MGKGPLFHLLLRIEATDVVQLHRLPRRNLENSKEAAVSFLQGTAEEHQWQDDRACGLVFT
GQFMFDTMGMTNILNNQDTAQALADGLMELSKEDSKCGKKIKDVEGNVIPTKCDPKTTFS
LFMKERNVVEDNSWDTKSRLSKNDLNFEALINLERILQKDSAEKRARVVRELLQSERKYV
QILEIVRDVYVAPLKAALSSNRAILSAANIQIIFCDILQILSLNSLPELLLYPSRRFEEY
LNLLYAVRLHTPAEHVDRGDLTTAIDQIKKYKGYIDQTLSEVNRYLIRVQDVAQLHCCDE
EISFSLSVACRSVDSASPESLPEMQNSQATLALLNQNLHFNKITRLYEHIHDLSLFLFND
ALLVSSRGTSHTPFERTSKTTYQFIASVALHRLLIENIPDSKYVKNAFILQGPKYKWICA
TEIEDDKFLWLSVLRNAIKSSMEK

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_8|1335_bp
atggggaaaggccccctcttccatctacttctgcgaatcgaagctacagacgtggtccag
cttcacagacttcctagaagaaaccttgaaaacagtaaggaagcagctgtatcctttctt
caaggaactgcagaagagcatcagtggcaggatgatagggcatgtggccttgtatttaca
gggcagtttatgtttgacaccatgggtatgaccaacattctaaacaaccaagatactgcg
caagctctggcagatggattgatggagttgtcaaaagaagattctaaatgtggcaaaaag
atcaaagatgttgaaggaaatgttattccaacaaaatgtgacccaaagacaacattcagt
ttattcatgaaggaaagaaatgttgtagaagacaattcttgggacacaaagtccaggctc
agcaaaaatgatttaaattttgaagcactgattaatctggagagaatactccagaaggac
tcagcagaaaagcgagctagagttgtcagagaactcttacagagtgagagaaaatacgtg
cagatactggaaattgtgagagatgtttatgtcgcaccactgaaagcagcattgtcatca
aacagagcgattctgagtgctgccaatatccagatcattttctgtgacattctacagatt
ttaagtctcaacagcctgccagagctgctgctgtacccatcccgaagatttgaagaatac
cttaatcttctctacgctgtcaggcttcatacccctgcagagcatgttgaccgtggggac
ttgaccactgcaattgaccaaatcaaaaaatataaaggttatatagatcagactctatca
gaagtaaacagatatctgattagggtacaagatgtagcccaacttcattgctgtgatgaa
gaaataagtttctctttaagtgtggcctgcagatctgtggactcagcatcaccagagagc
ttgccagaaatgcagaattctcaggccaccctagctctactcaatcagaatttgcatttt
aacaaaatcaccaggctctatgaacacatccatgatctcagccttttcctcttcaatgat
gccctgctcgtttctagtcggggcacatctcacactccatttgagaggacttcaaaaaca
acctaccagttcattgcatcagtggcccttcatcggttactcatagaaaatattccagat
tccaagtatgtcaagaatgcatttattcttcagggtccaaaatataaatggatttgtgct
acagaaatagaggatgataagttcctatggctgtcagtacttcgaaatgcaatcaaaagc
agtatggagaagtga

>gi568815592f:138722747_138923796|GENSCAN_predicted_peptide_9|302_aa
DTAIVHPVPIRMTPSKIHMQEMELKRTGSDHTNPTSPLLVKPSDLLEENKINSSVKFASG
NTVAFSVILDFTLLFIPIYADQITRGLGDSFQNMKDFGSKEAPGPAVHRPVDADGLITHT
STSPQQIPEQPNFADFSQFEVFAASNVNDEQDDEAEKHPEVLPAEKASDPASSLRVAKTD
SKTEEKTAASAPANVSKGTTPLAPPPKPVRRRLKSEDELRPEVDEHTQKTGVLAAVLASQ
PSIPRSVGKDKKAIQASIRRNKETNTVLARLNSELQQQLKDVLEERISLEVQLEQLRPFS
HL

>gi568815592f:138722747_138923796|GENSCAN_predicted_CDS_9|909_bp
gatactgctattgttcatccagttcccattcgtatgactccaagcaaaatccacatgcag
gaaatggaacttaaaagaactggcagcgatcatacaaatcccactagcccattacttgtg
aaaccatctgaccttttagaagaaaataagataaattcatcggtgaaattcgcttctggt
aatactgtagcattctcagtcatcttggattttactctgctgtttattcccatatatgca
gatcagattaccagaggccttggagactcttttcagaatatgaaagactttggtagcaaa
gaagctcctggtcctgctgtgcatcgcccagtggatgccgatggcctcataactcacact
agtacctcacctcagcagataccagagcaaccaaattttgcagatttcagtcagtttgaa
gtatttgctgcatcaaatgtaaacgacgaacaagatgatgaagccgagaaacatccagaa
gtcctgccggctgaaaaagcttctgatcctgcaagttctcttcgagttgccaaaacagat
agtaaaactgaagaaaagacagctgctagtgctcctgccaatgtgagcaaaggcacaaca
ccacttgctccaccacctaaacctgttcgaagaagattaaaatcagaagatgaattaagg
ccagaagttgatgaacatacacaaaagacgggtgtcttagctgctgttcttgcatcacaa
ccttctattcccagatctgttgggaaagataagaaagctattcaggcatcaattagacgt
aataaggaaaccaacaccgttttggccagattgaatagcgaattgcagcaacaattaaag
gatgttcttgaggagagaatttccctggaagttcaactggaacaacttcgaccattctct
cacctataa