GENSCAN 1.0	Date run:  7-Nov-116	Time: 15:46:47

Sequence gi568815592f:125886551_126138833 : 252283 bp : 38.51% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   2422   3431 1010  1  2   91  121   988 0.870  91.83
 1.02 Intr +   4092   4260  169  1  1   44  105   197 0.716  15.08
 1.03 Intr +  28783  28930  148  1  1   78   83   162 0.009  14.02
 1.04 Intr +  34393  34518  126  0  0  100   80   209 0.982  21.26
 1.05 Intr +  36132  36284  153  2  0   75   94   201 0.999  18.75
 1.06 Intr +  41113  41208   96  0  0   75   77    52 0.797   2.09
 1.07 Intr +  41624  41697   74  1  2   97   86    34 0.918   1.39
 1.08 Intr +  42086  42203  118  2  1   88   48    79 0.185   3.45
 1.09 Term +  52723  52743   21  0  0  141   48    10 0.101  -0.37
 1.10 PlyA +  52825  52830    6                               1.05

 2.04 PlyA -  54352  54347    6                               1.05
 2.03 Term -  62791  62667  125  2  2   99   48    70 0.694   1.67
 2.02 Intr -  63353  63171  183  0  0   64   61   192 0.556  12.94
 2.01 Init -  67114  67069   46  1  1   71   53    53 0.190  -0.35
 2.00 Prom -  67993  67954   40                              -3.35

 3.00 Prom +  69137  69176   40                              -8.75
 3.01 Init +  70428  70652  225  2  0   84   47   233 0.166  17.48
 3.02 Intr +  80337  80454  118  2  1   87   86    86 0.088   7.42
 3.03 Intr +  85709  85778   70  0  1  104   85    40 0.067   2.62
 3.04 Intr +  88297  88423  127  1  1   93   79   -11 0.051  -1.74
 3.05 Intr +  99590 100072  483  1  0   10  117   352 0.028  22.59
 3.06 Intr + 107207 107272   66  1  0   67  115    52 0.429   3.98
 3.07 Intr + 111673 111765   93  0  0   97   95    36 0.955   4.44
 3.08 Intr + 112000 112134  135  0  0   85   80    63 0.967   5.04
 3.09 Intr + 112907 113063  157  1  1   23   68   104 0.960   0.56
 3.10 Intr + 121842 121922   81  1  0   63   92    75 0.908   4.09
 3.11 Intr + 124703 124867  165  0  0  144   97   178 0.999  23.31
 3.12 Intr + 126221 126302   82  0  1   97  115    33 0.879   4.68
 3.13 Intr + 153401 153569  169  2  1  110  105   -26 0.002   0.33
 3.14 Term + 160913 161092  180  1  0   78   37   119 0.569   2.43
 3.15 PlyA + 162839 162844    6                               1.05

 4.05 PlyA - 165517 165512    6                               1.05
 4.04 Term - 173423 173292  132  2  0  127   50    37 0.917   0.91
 4.03 Intr - 174070 173908  163  0  1   38   59   180 0.605   9.16
 4.02 Intr - 177906 177825   82  1  1   70   74    47 0.130  -0.72
 4.01 Init - 182755 182584  172  1  1  102   78    83 0.588   8.35
 4.00 Prom - 202367 202328   40                              -4.35

 5.04 PlyA - 202466 202461    6                               1.05
 5.03 Term - 204965 204744  222  2  0    6   39   207 0.843   3.53
 5.02 Intr - 210160 210049  112  0  1   54   89    62 0.524   2.36
 5.01 Init - 211685 211624   62  2  2   53   98    75 0.594   5.77
 5.00 Prom - 221337 221298   40                              -4.65

 6.03 PlyA - 222386 222381    6                               1.05
 6.02 Term - 238155 237832  324  0  0   10   42   222 0.847   3.58
 6.01 Init - 240021 239929   93  0  0   97   81    29 0.876   3.53

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init +  99626 100072  447  1  0   60  117   315 0.897  27.61
S.002 Intr + 134610 134730  121  0  1   80   84    97 0.893   8.08
S.003 Init + 158912 159016  105  1  0   72   56   115 0.871   6.97


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:125886551_126138833|GENSCAN_predicted_peptide_1|638_aa
XPGEWEDLASEKDINPFSKFKSINKEKRQQNGEKIMTSDSRPIVPLEKSTGHTPTKPSGS
SVSEKLKKLDSSRETSHGSPTVTKLSKEPSDTSSAFESTAKENFLGEDDDFVDLEELSSQ
TGGGMHKKDTLKECLSLDPEERKKAESQINNSAVEMQVQSALAFLGTENDVELKGALDLE
TCEKQDIMPEVDKQSGSPESRVENTLNIHEDLDKVKLIEYYLTKNKEGPQVSENLQKTEL
SDGKSIEPGGIDITLSSSLSQAGDPITEGNKEPDKTWVKKGEPLPVKLNSSTEANVIKEA
LDSSLESTLDNSCQGAQMDNKSEVQLWLLKRIQVPIEDILPSKEEKSKTPPMFLCIKVGK
PMRKSFATHTAAMVQQYGKRRKQPEYWFAVPRERVDHLYTFFVQWSPDVYGKDAKEQGFV
VVEKEELNMIDNFFSEPTTKSWEIITVEEAKRRKSTCSYYEDEDEEVLPVLRPHSALLEN
MHIEQLARRLPARVQGYPWRLAYSTLEHGTSLKTLYRKSASLDSPVLLVIKDMDNQIFGA
YATHPFKFSDHYYGTGETFLYTFSPHFKVFKWSGENSYFINGDISSLELGGGGGRFGLWL
DADLYHGRSNSCSTFNNDILSKKEDFIVQDLEIQEIIN

>gi568815592f:125886551_126138833|GENSCAN_predicted_CDS_1|1917_bp
nngcctggagaatgggaagacctggcttcagaaaaggatatcaacccattcagtaagttc
aaatctatcaacaaggaaaaacgacagcagaatggagagaaaattatgacttcggattcc
agaccaatagtacctttggagaagtccacaggacatacacctacaaagccctcaggcagc
tctgtgtcagagaaattaaagaaactggactcctctagggagacatcccatggttctccc
acagtgactaagctcagcaaggaaccttccgacacttcttctgcatttgaatctacagcc
aaagaaaactttctaggggaagatgatgattttgttgacttggaagaactttcttctcaa
actggtggtggaatgcacaaaaaagacaccttgaaggagtgcctttctcttgacccagag
gaacgaaagaaagctgagtcacaaataaacaattctgccgtggaaatgcaggtgcagtca
gccctagcctttttgggaacagagaatgatgttgaactgaagggggcgctagatttagaa
acctgtgagaagcaagatataatgccagaagtggacaagcagtctggttcgccagaaagc
cgagtagaaaacacactgaacatacatgaagatttagataaagttaaactcattgaatat
tacctgactaagaacaaagaagggccacaggtatctgaaaatttgcagaaaacagaatta
agtgatggaaaaagtattgaaccagggggaatagacattacccttagtagttctctttcc
caggcgggtgatcccataactgagggcaataaagagccagataagacctgggtgaaaaag
ggagagcccctcccggtaaaactgaactcttctacagaagcaaatgtgattaaagaggct
ctagactcctctttggaatctactctggacaacagctgtcaaggtgcacaaatggataat
aaatctgaagttcagttgtggctgttaaagagaattcaggtacccattgaagatatactt
ccttcaaaagaagaaaaaagcaagaccccacccatgttcctgtgcatcaaagtgggaaaa
ccaatgagaaaatcctttgccactcacactgcagccatggtccagcagtacggcaaacgg
agaaagcagccagagtactggtttgctgttcctcgggagagggtggatcatttgtacaca
ttctttgttcagtggtctcccgatgtctatggaaaagatgccaaagagcaaggctttgtg
gtggtggagaaggaagaactgaacatgattgacaacttcttcagtgagccaacaaccaag
agctgggagatcatcactgttgaagaggcaaagcgcaggaagagcacatgcagctactat
gaagacgaggacgaagaggtgctgcctgtcctacggccccacagcgcgctcctggagaat
atgcacatcgagcagctggcccgacgccttcctgcaagggtgcaagggtatccatggaga
ctggcctatagcacgttagagcacgggaccagcttaaagacgctctaccggaaatcggca
tcactagacagtcctgtcctattggtcatcaaagatatggataatcagatttttggagca
tatgcaactcatcctttcaagttcagtgaccactattatggcacaggcgaaacttttctc
tacacattcagccctcattttaaggtctttaagtggagtggagaaaattcatactttatc
aatggagacataagttctttagaacttggtggtggagggggacgatttggtttatggcta
gatgctgatttataccacggacgaagcaactcttgcagcactttcaataatgatattctt
tccaaaaaggaagacttcatagttcaggatctggagatccaggagataatcaactaa

>gi568815592f:125886551_126138833|GENSCAN_predicted_peptide_2|117_aa
MLAAAEGQAAPGTRTVNNSRRIEALAGIPMYQNQFTAWYWQMSVVSTRTLVRSMFYFGQK
KEKPTGDEVEQKDASTSQLCLRGLYLMTQAEGAASIWNVSGVRAEGRNNTMEPHDGF

>gi568815592f:125886551_126138833|GENSCAN_predicted_CDS_2|354_bp
atgctggctgctgcggaggggcaggcagctccaggcacccgcacagtaaacaactccagg
aggatagaggccctcgctggcatccccatgtatcaaaaccagttcacggcctggtactgg
cagatgtccgtggtcagcaccaggaccttggtgcgctcaatgttttactttggccagaaa
aaggagaagccaacaggtgatgaagtagaacaaaaggatgcctcaacaagtcaactgtgt
cttcgtggactttatctcatgacccaggctgaaggagcagcctccatctggaatgtttct
ggtgtcagggcagagggaagaaataacacaatggagccacatgatggcttttaa

>gi568815592f:125886551_126138833|GENSCAN_predicted_peptide_3|716_aa
MAEEQVNRSAGLAPDCEASATAETTVSSVGTCEAAGKSPEPKDYDSTCVFCRIAGRQDPG
TELLHCEVGGDARPGNEDLICFKDIKPAATHHYLVVPKKHIGNCRTLRKDQVELVENMVT
VGKTILERNNFTDFTNVRMGFHMPPFCSISHLHLHVLAPVDQLGFLSKLVYRVNSYWFIT
TNLQGNGEISKEMVKFQSNFEEQVLKGCRESWKHTPSGTITWKYTVLLSQAAPESHASPL
TSYQRWETPNHQAFTGEEAPPTAAGVSDSEREKRRDSACLAELPLPALQALSLWRLGFGR
EKEGPSAGRAGARWAAAMALSCTLNRYLLLMAQEHLEFRLPEIKSLLLLFGGQFASSQET
YGKVPFLHSDSTYKIKIHTFNKTLTQEEKIKRIDALEFLPFEGKVNLKKPQHVFSVLEDY
GLDPNCIPENPHNIYFGRWIADGQRELIESYSVKKRHFIGNTSMDAGLSFIMANHGKVKE
NDIVFDPFVGTGGLLIACAHFGAYVYGTDIDYNTVHGLGKATRKNQKWRGPDENIRANLR
QYGLEKYYLDVLVSDASKPSWRKGTYFDAIITDPPYGIRESTRRTGSQKEIPKGIEKWEK
CSGFQQQISNISLIILFGFLDVICGTLGGNLKVFKDDLFSVFLFKPSYLKCFEVIWELPI
HPAESHLYHSVKAPYSPSFKFVCDLILPACWTRTRVSRGQGVKGCHPDSPLSWFNT

>gi568815592f:125886551_126138833|GENSCAN_predicted_CDS_3|2151_bp
atggcggaggaacaggtgaaccgcagcgccggcctggcccccgactgtgaggcctcggcg
actgcagaaactacggtttcctcagtggggacctgtgaagccgctggcaagtcaccagag
cccaaggactacgacagcacctgcgtgttctgccggatcgcggggcggcaggacccgggc
accgaactcctgcactgcgaggtgggcggcgacgcgcggccggggaatgaggacctaatt
tgcttcaaagatatcaaaccagcagcaactcatcattatcttgtggtgccaaagaagcat
attggaaactgcagaactctaaggaaagatcaagtagaactggttgagaacatggtaact
gttggaaaaaccattcttgaaagaaataatttcactgacttcacgaatgtgaggatgggt
tttcatatgccaccattctgttccatttcccacttgcaccttcatgttctggcaccagtg
gatcagcttggcttcttatccaagttggtttatagagtcaattcctattggtttatcaca
acaaacctacaaggaaatggtgaaatttccaaggaaatggtgaaatttcagtccaatttt
gaagaacaggttttgaagggctgtagagaaagctggaagcacactccaagtggaacgata
acttggaaatatactgtcttattatcacaggctgctcctgaaagccacgcgtccccgctc
accagctaccagcgctgggagacccctaaccaccaggcattcacaggtgaggaagcccct
cccacagcggccggagtttcggactcggagcgcgagaaacgtcgggatagcgcctgcctc
gcagagcttccgcttccggcccttcaggctctgtctctgtggagactgggctttgggagg
gagaaagagggacctagcgcgggccgcgcaggcgcacggtgggcagctgcaatggcgctg
tcgtgtacccttaacaggtatctgctcctcatggcgcaggagcatctggagttccgcctg
ccggaaataaagtctttgcttttgctttttggaggtcagtttgccagcagtcaagaaact
tatggaaaggttccatttctacattcggactctacatataaaataaagattcacactttt
aataagacattgacacaagaagagaaaatcaagcgaatagatgcacttgaatttctgcca
tttgaaggaaaagtgaatttaaagaaaccgcaacatgtattttctgttttggaggattat
ggtttagacccaaactgcatccctgagaatccacataatatttattttggtagatggatt
gcagatggacagagagagcttattgagtcatacagtgtcaaaaagagacactttattgga
aatacaagtatggatgctggtttgtcattcattatggctaaccatggaaaagtgaaagaa
aatgatattgtctttgatccatttgttggaacaggtggcctgctgatagcatgtgctcat
tttggtgcatatgtgtatgggacagacatagactacaacacagttcatggcttgggaaag
gctactaggaaaaaccagaagtggagaggaccagatgaaaacattagggccaatcttcgt
caatatggtttagagaagtattaccttgatgtcctggtttcagatgcatctaaaccttcc
tggaggaagggcacatattttgatgcaatcattactgatcctccatatggtatcagagaa
tctacaagaagaacaggttcacagaaggagataccaaaggggatagaaaaatgggaaaaa
tgttcaggatttcagcagcagatctcaaacatttcactgattattttgtttgggtttctg
gatgtgatttgtggtacactggggggaaatctaaaagtattcaaggatgatttattttca
gtttttctgtttaaaccatcttatttaaaatgtttcgaggttatatgggagctccccatc
catcccgctgagagccacctctaccactcagttaaagccccgtattcaccatccttcaag
tttgtgtgtgacctgattcttcctgcatgctggacaaggacccgggtatcaagagggcaa
ggtgtaaaaggctgtcaccctgactctccactgagctggtttaacacttag

>gi568815592f:125886551_126138833|GENSCAN_predicted_peptide_4|182_aa
MDNMAEPKEFPFPDHKLQSHWSTAVVACGPTFMAWFSCVLSQAQPYRWLRQSQGMEGASI
QEPKALGYPSSCVLHLFESCFENRRANPDSLGAVTPFDLRCVTYALSDGAIREWTILSGE
RAESTGLLDYTRSELPEGEINFLSISSELFLDVVTCSSMPMNASGFCEGGFNFIQPDTMI
RH

>gi568815592f:125886551_126138833|GENSCAN_predicted_CDS_4|549_bp
atggacaacatggcagagccaaaagaatttcctttccctgatcacaaactccaaagccat
tggtctactgctgttgtagcatgtggcccaacatttatggcctggttcagctgtgtgctt
agtcaagcacagccttacaggtggttaaggcaaagccaaggaatggaaggagcctcaatc
caggagcccaaggctcttggctaccccagcagctgtgtattacatttatttgaatcctgt
tttgagaatagaagggccaacccagactctctgggtgctgtgacgccctttgatctgcgt
tgtgtcacatacgcactgagtgatggagccattcgtgaatggactattctctctggagag
agggcagagtcaacagggctcttagactacactcggtctgagttgcctgaaggagagata
aattttctgagtatttcctcagagctgtttttggatgtggtgacatgcagttccatgcca
atgaatgcctcagggttttgtgaaggaggatttaatttcattcaaccagacactatgatt
agacattga

>gi568815592f:125886551_126138833|GENSCAN_predicted_peptide_5|131_aa
MNAAANTSGDQRWEVSGRQAQYRIILGTTGDTKIKKTHPDLQRLKDKTAISTSALMPMNR
FRETLALQLGGRFMDRKRSDVQKTEVKYRNSWIGYSSTFALFEHHLNSCPPVSGEKSVIG
TRRLRPAYTSS

>gi568815592f:125886551_126138833|GENSCAN_predicted_CDS_5|396_bp
atgaacgcagcagcaaacacatcaggagatcagaggtgggaagtgagtggacgccaagca
cagtacaggatcattctagggactacgggggatacaaagattaagaagactcatcctgac
ttacagaggcttaaagacaagactgcaatcagtaccagtgccctaatgcccatgaacagg
tttagagagactctggcactgcaacttggtggaagatttatggaccgaaaaaggagtgat
gtacagaaaacagaagtgaagtacagaaacagctggattggctacagctcgacatttgcc
ttatttgaacaccatttaaacagttgtccacctgtgagtggcgaaaagtcggtgattggt
acgcgtaggttacggcctgcttatacttccagttag

>gi568815592f:125886551_126138833|GENSCAN_predicted_peptide_6|138_aa
MGSELCGNWIKVKTGQKQFRGGCRPREQMSPGDYVDSTLIYKPLIIWQPCSKCSYASDRP
ERTDKNAHFLKPNLGSDTVSILSYFIAQSRIDSGPHKKTPPIQGEKQQSHSKGCEYKDAC
RIGAVIAIYDTCTKKEGN

>gi568815592f:125886551_126138833|GENSCAN_predicted_CDS_6|417_bp
atgggttcagaactgtgtggaaactggatcaaagtgaaaacagggcagaagcaattcaga
ggaggctgtagaccaagagagcaaatgagtccaggtgactatgtggactccactctgatc
tacaagcctctcatcatctggcagccatgttcaaaatgttcttatgccagtgacaggcct
gagagaacagacaaaaatgcacactttttgaagcctaaccttggaagtgatacagtgtca
atcctgtcatattttattgcccaaagtagaatagactcgggaccccataaaaagacccca
cctattcagggagagaaacagcagtctcacagcaaaggatgtgaatacaaggacgcatgc
agaattggtgctgttattgcaatctatgacacctgcactaaaaaagagggcaattaa