GENSCAN 1.0	Date run:  5-Nov-116	Time: 06:13:59

Sequence gi568815592f:12414110_12614721 : 200612 bp : 39.01% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +  18112  18292  181  0  1   28   58   171 0.588   7.49
 1.02 Term +  27374  27492  119  0  2   55   44   126 0.228   2.62
 1.03 PlyA +  28232  28237    6                               1.05

 2.00 Prom +  35279  35318   40                              -4.05
 2.01 Sngl +  35589  35765  177  2  0   83   43   189 0.751   8.60
 2.02 PlyA +  37796  37801    6                               1.05

 3.00 Prom +  40522  40561   40                              -5.85
 3.01 Init +  57637  57692   56  0  2   60   85    32 0.661   0.91
 3.02 Intr +  59890  60094  205  1  1   59   58   171 0.324   9.48
 3.03 Intr +  79556  79760  205  1  1   76   84   104 0.843   6.65
 3.04 Term +  79977  80590  614  1  2   62   53   176 0.833   5.15
 3.05 PlyA +  82591  82596    6                               1.05

 4.00 Prom +  97286  97325   40                              -4.25
 4.01 Sngl + 100001 100615  615  1  0   99   34   656 0.999  57.24
 4.02 PlyA + 100645 100650    6                               1.05

 5.04 PlyA - 100708 100703    6                               1.05
 5.03 Term - 101909 101810  100  1  1   66   38    56 0.222  -4.98
 5.02 Intr - 102458 102352  107  2  2   53   68   135 0.226   6.09
 5.01 Init - 107929 107867   63  1  0   67   72    32 0.247   0.70
 5.00 Prom - 108863 108824   40                              -2.25

 6.00 Prom + 115067 115106   40                              -3.45
 6.01 Init + 117156 117180   25  2  1   79  111    15 0.680   2.64
 6.02 Intr + 120130 120284  155  2  2  110   23    81 0.512   2.67
 6.03 Intr + 120733 120937  205  0  1   68   35   143 0.554   4.85
 6.04 Term + 121559 121719  161  0  2   70   41   136 0.561   4.22
 6.05 PlyA + 123191 123196    6                               1.05

 7.04 PlyA - 123238 123233    6                               1.05
 7.03 Term - 123610 123605    6  1  0  108   41     0 0.489  -5.81
 7.02 Intr - 125021 124853  169  1  1   71   77   164 0.730  12.63
 7.01 Init - 125773 125679   95  1  2   73   28    94 0.364   1.80
 7.00 Prom - 128560 128521   40                              -2.95

 8.00 Prom + 133963 134002   40                              -8.85
 8.01 Sngl + 136472 137146  675  1  0   59   43   323 0.486  20.83
 8.02 PlyA + 137374 137379    6                               1.05

 9.00 Prom + 137543 137582   40                              -6.15
 9.01 Init + 138490 138653  164  0  2   70   72   131 0.272   8.95
 9.02 Intr + 139318 140774 1457  1  2   19   50   267 0.050   4.39
 9.03 Intr + 142400 142515  116  0  2   55   92    94 0.315   5.75
 9.04 Intr + 145942 146112  171  0  0   61   60   145 0.438   8.22
 9.05 Intr + 154045 154155  111  0  0   55    2   133 0.018   1.06
 9.06 Intr + 163404 163653  250  2  1   73   92   134 0.155   8.39
 9.07 Intr + 178716 178854  139  1  1   79   65   113 0.363   6.70
 9.08 Intr + 179707 179793   87  1  0   12   76   110 0.148   0.37
 9.09 Intr + 187919 187971   53  2  2   90   59    68 0.040   1.73
 9.10 Term + 196912 197009   98  2  2   55   40   134 0.029   2.45
 9.11 PlyA + 197228 197233    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_1|99_aa
MLHIVHQTYSEEHSAGNGLGGELAIWLQEAQQSHPELHDTSYTEEQRCPRVHVIHLTSQH
GGGEFGHRHTGKAMRIRRRDRSDASISQVAPRIAGSSRN

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_1|300_bp
atgctccacattgtacaccagacttactcagaggagcacagtgctgggaatggcttgggt
ggtgaacttgcaatatggcttcaagaggcccagcagtcccatccagagttgcatgacact
tcttatacagaagagcagagatgcccaagagttcatgtcattcacttaacaagtcagcat
ggaggaggagaatttggacacagacatacggggaaggccatgagaattagaagaagagat
cggagtgatgcatctataagccaagtagcaccaaggattgctggcagcagcagaaactag

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_2|58_aa
MGSQPRNAGAIRYRRRQRMDSPPEPLQTLDFSLVKLVLSSYPPELRDLESLLFKAPSL

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_2|177_bp
atggggtcacagccaaggaatgctggagccatcagataccggaggaggcaaagaatggat
tctcccccagaacctctgcagactcttgattttagcctagtaaaactggtgctgtcctcc
taccctccagaactacgagatcttgagtctctgttgtttaaagcaccaagtttgtga

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_3|359_aa
MESVCADLFMCPPSGEGDWSAAGEAHKIKTLAVDPGTDRHKQAIVGITCTSVEEQGGLLL
STWEDHQGNPTNNWERSGVVSEVLVVQMQLEGTSLSKRLDIGKTGTLLADLQREGIENSW
REDTEAGLEREEAENPTQSCHALGLFLAPNNSCGGGDFNPRKTVCSVCCRAILPMRRSQS
DLSTPQSAGVFWSPSLAMPACNAAPRYLLGSHIIVPALVDCVPDQQSTPVEWPQWTGTSL
PAPRPHCSLLHATLPTDTRPRPPPILLSQHTCVGGPTFPFPASVWVHVHPAKPLLQVRMH
PALLPLAIPPLSWAHWQSWSPLAPPLPALHSALELLVGNQARRTVDLPPAQSGHYHSCE

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_3|1080_bp
atggaaagcgtctgtgcagacttgttcatgtgtccgccctctggagaaggggactggtct
gcagctggggaagcacataagatcaaaactctggcagtggatccaggtactgacaggcac
aagcaggcaatagtgggcatcacatgtaccagtgtggaagagcagggagggctgctgctg
agcacatgggaggaccaccaagggaaccctacaaataactgggagagatctggggtggtg
agcgaggtcctcgttgtccaaatgcagttggaaggaacatctctctccaagagactagac
attgggaagactggcacactcctagcagatcttcagagggaaggcattgagaacagttgg
agggaagacacagaagctgggctggagagggaggaagctgagaaccccacacagagctgc
catgcactgggactattcctagcccccaacaattcctgcggagggggagactttaaccct
aggaaaactgtctgctctgtgtgctgcagggcgatcttgcccatgagaagaagccagtct
gatctgagcacccctcagtctgctggtgtcttctggagccccagcctggccatgcctgct
tgcaatgcagcccccagatacctcctggggtcccacatcatagttcctgccctggtggac
tgtgtccccgaccagcagagtactccagtagagtggccccagtggacaggaaccagccta
cctgcgccccgcccccactgcagcctccttcatgccaccttgcctacagacactcgccca
aggccaccccctatattgctttcccagcacacatgtgtgggtggccctacctttcccttc
cctgccagtgtgtgggtgcatgtgcaccctgccaagccactgctgcaagtgcgaatgcac
cccgccctccttcctctcgccataccaccattgtcatgggcacattggcagtcatggagc
cctctagccccacccttgccagcacttcactctgcgctggagctgctagtgggaaatcag
gcaaggagaacagtggacctgcccccagcccagagtggccactaccactcatgtgaatga

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_4|204_aa
MGAYKYIQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYV
IYRIRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSVAEERVGRHCGALRVLNSYW
VGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKPVHKHREMRGLTSAGRKSRGLGKGHKF
HHTIGGSRRAAWRRRNTLQLHRYR

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_4|615_bp
atgggtgcatacaagtacatccaggagctatggagaaagaagcagtctgatgtcatgcgc
tttcttctgagggtccgctgctggcagtaccgccagctctctgctctccacagggctccc
cgccccacccggcctgataaagcgcgccgactgggctacaaggccaagcaaggttacgtt
atatataggattcgtgttcgccgtggtggccgaaaacgcccagttcctaagggtgcaact
tacggcaagcctgtccatcatggtgttaaccagctaaagtttgctcgaagccttcagtcc
gttgcagaggagcgagttggacgccactgtggggctctgagggtcctgaattcttactgg
gttggtgaagattccacatacaaattttttgaggttatcctcattgatccattccataaa
gctatcagaagaaatcctgacacccagtggatcaccaaaccagtccacaagcacagggag
atgcgtgggctgacatctgcaggccgaaagagccgtggccttggaaagggccataagttc
caccacactattggtggctctcgccgggcagcttggagaaggcgcaatactctccagctc
caccgttaccgctaa

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_5|89_aa
MDTKKGAIVTGSYLKMEGERRSRAQIVTAMFGYRSTWPELRSGDEGDTVRLTGSKASLAD
CQKIHDNRHAPFQENSDSLIEWLVYYRII

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_5|270_bp
atggacacaaagaagggagcaatagtcactgggtcctacttgaagatggagggtgagagg
aggtccagggctcagattgtcactgctatgtttggctataggagcacatggcctgagctg
cgatccggggatgagggagacaccgttagactgactggctccaaagccagtttagcagac
tgccaaaagattcatgacaacagacatgcaccttttcaagagaattcagatagccttata
gaatggctggtttattacagaatcatctaa

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_6|181_aa
MDESSRNIERLESITAILALQGWVGAFSHYPGGSWNPLPLLLEKAGGSLKENSSKLATEP
QHLHPEGDGSLAFVSWCHGEPLSGACEFLEALQCMEDPLKITAAKNGSRFPTTGGIMLQI
TCLSRMMDEGSCRKILQAYPDKSPRTVTYVHFSITLEGIQFYVCRAAVARETEVLVRMQL
N

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_6|546_bp
atggacgaatcttcaaggaatattgaaaggctggagtctatcacggcgattctggccctg
cagggctgggtgggtgcattctctcattaccctggaggttcctggaatccactaccactt
ctcctagagaaagctggtgggtctttgaaagaaaactcttctaagctagctactgagcct
cagcatttacatcctgaaggtgatggaagccttgcatttgtgtcttggtgccatggggag
cctctgtctggagcctgtgaatttctagaggcccttcaatgcatggaagaccctctaaaa
attacagctgctaaaaatgggagcagattccctaccactgggggcatcatgctgcaaatt
acatgtctatccagaatgatggatgagggaagctgcaggaagattttgcaagcatacccg
gataaaagcccccgtacagtcacttatgtgcacttctctataacactggagggaattcag
ttttatgtctgcagagctgctgttgccagggaaacagaggtcctagtcagaatgcaactg
aattaa

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_7|89_aa
MKDCTRLRIFAGYLVPKIIPSRPSHWAVPQIGLNFPPRCQTTENSRFLEIGQHRNDLQPV
LPWRPLQCVGTSHGAACLRADLTEGKGKA

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_7|270_bp
atgaaggattgtaccaggttaaggatctttgcaggttacctggtgcccaagatcatccct
tcaaggccatcacactgggctgtccctcagattgggttaaactttccaccccgatgccag
accacagagaacagccgcttcctggaaattgggcagcaccgaaatgaccttcagccagtg
ttgccctggagaccgttgcagtgtgttggaaccagccacggggctgcgtgtctccgtgct
gacctcactgaagggaagggcaaggcataa

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_8|224_aa
MEDEMNEMKREGKFREKRIKRNEQSLQEIWDYVKRPNLRLIGVPESDGENGTKLENTLQD
IIQENFPNLARQANIQIQEIQRMPQRYSSRRATPRHIIVRFTKVEMKEKMLRAAGEKGPV
IHKGKPIRLTADLSAETLQARREWGPIFNILKEKNFQPRISFPAKLSFINEGVIKYFTDF
TDFTDKQMLRDFVTTRPALKELLKEALNMERNNRYQPLQNHAKL

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_8|675_bp
atggaagatgaaatgaatgaaatgaagcgagaagggaagtttagagaaaaaagaataaaa
agaaatgaacaaagcctccaagaaatatgggactatgtgaaaagaccaaatctacgtctg
attggtgtacctgaaagtgatggggagaatggaaccaagttggaaaacactctgcaggat
attatccaggagaacttccccaatctagcaaggcaggccaacattcagattcaggaaata
cagagaatgccacaaagatactcctcgagaagagcaactccaagacacataattgtcaga
ttcaccaaagttgaaatgaaggaaaaaatgttaagagcagccggagagaaaggtccggtt
atccacaaagggaagcccatcagactaacagcggatctctcggcagaaaccctacaagcc
agaagagagtgggggccaatattcaacattcttaaagaaaagaattttcaacccagaatt
tcatttccagccaaactaagcttcataaatgaaggagtaataaaatactttacagacttt
acagactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgccctaaaa
gagctcctgaaggaagcactaaacatggaaaggaacaaccgataccagccactgcaaaat
catgccaaattgtaa

>gi568815592f:12414110_12614721|GENSCAN_predicted_peptide_9|881_aa
MDKFLDTYTLPRLNQEEVDSQNRPITGSEIVAIINSLPTKKSPGPDGFTAKFYQRKPHVS
AQNLRKLISNFSKVSGYKINVQKSQAFLYTNNRQAESQIMSELPFTIASKRIKYLGIQLT
RDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPM
TFFTELEKTTLKFIWNQKRAHIAKSILSQKNKAGGITLPDFKLYYKATVTKTAWYWYQNR
DIDQWNRTEPSEIMLHIYNYLIFDKPEKNKKWGKDSLFNKWCWENWIAICRKLKLDPFLT
PYTKINSRWIKDLNVRPKTIKTLEENLGITIQDIGMGKDFMSRTPKAMATQAKIDKWDLI
KLKSFCTAKETTIRVNRQPTKWEKIFTTYSCDKGLISRIYNELKQIYKKKTNNPIKKWAK
DMNRHFSKENIYAARKHMKKCSPSLAIREMQIKTTMRYHLTPVRMAIIKKSGNNRCWRGC
GEIGIFLHCWWDCKLVQPLWKSVWRFLRDLELEIPFDPVIPLLGIYPKEYKSCCYKDTCT
SMQEWPNTTSVCQTLACIGINWNLTKVHIANATPKVSDAESLETAASGIEEEPQEEGDFQ
LNFIVISNERAFPGPNPGMANGKCRYKPRNHGRQRGAADEERKVIAMGKDVTECRPADLI
LSSFTRGSDQLSKQLPVLAFRGCLPQVMCGFWGKEPTDTPQSQRACIPGTAAQNDAGPSQ
QGMACGSQGYARTLRCNLTGSFSDLKEFTKNVLPLLELPQVGNPTSVTTSSGTLVVHVNS
EQWKLAFHPYGNGTQRQSPRSGVEGNPRGEATEFATQLTHKKQLEKDSKSSRGFEVCKAL
AEIGKKQLRERQKLKAMTTPSVSKDMQHLELLDLAGGDVIQ

>gi568815592f:12414110_12614721|GENSCAN_predicted_CDS_9|2646_bp
atggataaattcctcgacacatacaccctcccaagactaaaccaggaagaagttgactct
cagaatagaccaataacaggctctgaaattgtggcaataatcaatagcttaccaaccaaa
aagagtccaggaccagatggattcacagcaaaattctaccagagaaaaccccatgtctca
gcccaaaatctccgtaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
gtacaaaaatcacaagcattcttatacaccaataacagacaagcagagagccaaatcatg
agtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaacttaca
agggacgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaagag
gatacaaacaaatggaagaacattccatgctcatgggtaggaagaatcaatatcgtgaaa
atggccatactgcccaaggtaatttatagattcaatgccatccccatcaagctaccaatg
actttcttcacagaattggaaaaaactactttaaagttcatatggaaccaaaaaagagcc
cacatcgccaagtcaatcctaagccaaaagaacaaagctggaggcatcacgttacctgac
ttcaaactgtactacaaggctacagtaaccaaaacagcatggtactggtaccaaaacaga
gatatagatcaatggaacagaacagagccctcagaaataatgctgcatatctacaactat
ctgatctttgacaaacctgagaaaaacaagaaatggggaaaggattccctatttaataaa
tggtgctgggaaaactggatagccatatgtagaaagctgaaactggatcccttccttaca
ccttatacaaaaattaattcaagatggattaaagacttaaacgttagacctaaaaccata
aaaaccctagaagaaaacctaggcattaccattcaggacataggcatgggcaaggacttc
atgtctagaacaccaaaagcaatggcaacacaagccaaaattgacaaatgggatctaatt
aaactaaagagcttctgcacagcaaaagaaactaccatcagagtgaacaggcaacctaca
aaatgggagaaaattttcacaacctactcatgtgacaaagggctaatatccagaatctac
aatgaactcaaacaaatttacaagaaaaaaacaaacaaccctatcaaaaagtgggcgaag
gacatgaacagacacttctcaaaagaaaacatttatgcagccagaaaacacatgaaaaaa
tgctcaccatcactggccatcagagaaatgcaaatcaaaaccacaatgagataccatctc
acaccagttagaatggcgatcattaaaaagtcaggaaacaacaggtgctggagaggatgt
ggagaaataggaatatttttacactgttggtgggactgtaaactagttcaaccattgtgg
aagtcagtgtggcgattcctcagggatctagaactagaaataccatttgacccagtcatc
cccttactgggtatatacccaaaggagtataaatcatgctgctataaagacacatgcaca
tccatgcaagaatggcctaatacaaccagtgtttgtcaaactttagcatgtattggaatc
aactggaatcttactaaagtacacattgccaatgccacccccaaagtttctgatgcagag
tccttggagacagcagccagtggaattgaggaagagccacaggaagaaggagatttccag
ctaaacttcatagtaatttcgaatgagcgtgcctttcctgggccgaatccagggatggca
aatggaaagtgcagatacaagcccagaaaccatggcaggcaaagaggggcagccgatgaa
gaaaggaaggtcattgccatggggaaggatgtgactgaatgtcgtcctgcagacctaata
ctttcctcatttacacgtggctcagatcagctttctaagcagctcccagtcttagctttc
agaggctgtctgccccaggtcatgtgtggcttctggggaaaggagcctactgacactcct
caaagtcagcgggcctgcattccaggcactgctgctcagaatgacgcaggaccctcgcag
caagggatggcctgcggctcccagggatatgctagaacactcagatgcaatctgacaggc
agcttcagtgatttgaaggaattcacaaagaacgttttgcccctcctggaattgccacaa
gttggaaatcccacatcagtcaccacttcctcggggacattagttgttcatgtaaattcc
gaacaatggaagctggcttttcatccatacggaaatggaacacaaagacagagccctaga
agtggagtggaggggaatcctagaggagaggccactgagtttgccacccagttgacgcat
aagaagcaacttgagaaggactccaaaagcagcaggggatttgaggtatgcaaagctttg
gctgagattggaaagaaacagctcagagaacggcaaaaattgaaagcaatgacaacacca
agtgtcagcaaggacatgcagcatctggagctcttggaccttgctggtggtgatgtcata
cagtaa