GENSCAN 1.0	Date run:  6-Nov-116	Time: 06:04:43

Sequence gi568815592f:110858770_111067787 : 209018 bp : 43.20% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +     10    123  114  0  0   74   80   132 0.998  11.21
 1.02 Intr +    203    333  131  1  2   83   17   167 0.547   8.59
 1.03 Intr +  16327  16590  264  1  0   41   91   277 0.501  19.93
 1.04 Intr +  30088  30214  127  1  1   83  108   -21 0.315   0.08
 1.05 Intr +  31485  31587  103  2  1   39  108    55 0.452   2.35
 1.06 Intr +  33556  33674  119  2  2   32   60   109 0.530   2.68
 1.07 Intr +  33966  34058   93  2  0  117   76   111 0.999  12.96
 1.08 Intr +  34141  34296  156  0  0   82   91   108 0.999  10.71
 1.09 Intr +  46374  46532  159  2  0   77  100    44 0.193   4.68
 1.10 Term +  46617  46724  108  2  0   65   43    92 0.232   0.91
 1.11 PlyA +  46790  46795    6                               1.05

 2.00 Prom +  47966  48005   40                              -4.96
 2.01 Sngl +  49889  50551  663  1  0   60   42   224 0.973  11.18
 2.02 PlyA +  50815  50820    6                              -0.45

 3.00 Prom +  51187  51226   40                              -2.46
 3.01 Init +  58633  58946  314  0  2   72   74   182 0.375  12.00
 3.02 Term +  62490  62571   82  0  1    3   44   140 0.215  -1.73
 3.03 PlyA +  63074  63079    6                               1.05

 4.00 Prom +  64163  64202   40                              -5.16
 4.01 Sngl +  64797  65198  402  2  0   77   43   444 0.999  35.07
 4.02 PlyA +  68203  68208    6                               1.05

 5.00 Prom +  80799  80838   40                              -4.76
 5.01 Init + 100001 100060   60  1  0  115   60   120 0.651  13.15
 5.02 Intr + 100403 100483   81  1  0   74   97    30 0.701   2.33
 5.03 Intr + 101645 101708   64  1  1  113   97   100 0.999  11.69
 5.04 Intr + 101803 101847   45  2  0  103  115    26 0.969   5.18
 5.05 Intr + 103623 103736  114  1  0   92   78    41 0.936   3.92
 5.06 Intr + 108741 108986  246  1  0   68   18   207 0.071   9.13
 5.07 Intr + 123211 123280   70  2  1   -4   41   149 0.003  -0.76
 5.08 Intr + 126237 126369  133  0  1   62  103    88 0.826   8.35
 5.09 Intr + 138414 138495   82  2  1   61   97     0 0.013  -2.59
 5.10 Intr + 140942 141018   77  0  2   80  116    17 0.054   2.93
 5.11 Intr + 149269 149368  100  0  1  113  111    87 0.951  13.18
 5.12 Intr + 156985 157087  103  2  1   67   97    43 0.456   2.33
 5.13 Intr + 169556 169641   86  2  2   89   47    93 0.164   4.76
 5.14 Term + 172709 172731   23  0  2   68   45    14 0.055  -6.43
 5.15 PlyA + 172794 172799    6                               1.05

 6.03 PlyA - 173054 173049    6                               1.05
 6.02 Term - 188679 188099  581  1  2   76   39   688 0.672  57.35
 6.01 Init - 202708 202699   10  1  1   77   93     4 0.068   0.57
 6.00 Prom - 204451 204412   40                              -2.56

 7.02 PlyA - 204732 204727    6                              -0.45
 7.01 Sngl - 206231 205263  969  2  0   42   39   248 0.968  12.03

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Term + 108741 109021  281  1  2   68   43   197 0.917   8.81
S.002 Init - 139587 139442  146  0  2   96   97    79 0.831   9.19


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_1|457_aa
MTAYSTRRHLYDPKNHILPPMDNLTISLQMGTNKCASQMGYTQGAKQSGQVFGLGRQIHD
PKFCPEGTVADRAPSGAQARGSLTVMEAAHFFEGTEKLLEVWFSRQQPDANQGSGDLRTI
PRWVPGALADIRAWGLSPPPRHQPRVEPEFPQLSVGGKSAAWGRFGGLGSESSMFVSKRR
FILKTCGTTLLLKALVPLLKLARDYSGFDSIQSFFYSRKNFMKPSHQGYPHRNFQEEIEF
LNAIFPKSRVISQPDQTLEILMSELDPAVMDQFYMKDGVTAKDVTRESGIRDLIPGSVID
ATMFNPCGYSMNGMKSDGTYWTIHITPEPEFSYVSFETNLSQTSYDDLIRKVVEVFKPGK
FVTTLFVNQPPLVIPRQTGSGVDLQQTPTDLQLRVLTVRRNTNKQDIYTKTLSARHHHQR
PKERNSSPAMEQSWMENDFDELREEGFRRSVITTSPS

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_1|1374_bp
atgaccgcgtacagcacaaggaggcatctctacgaccccaagaaccacatcctgcccccc
atggacaacttaaccatcagcctccagatgggtacaaacaagtgtgccagccagatgggc
tacacgcagggcgccaagcaaagcggccaggtctttggcctgggccggcagatacatgac
cccaagttctgcccagaaggcacagtggccgacagggctccctcgggcgcgcaggctcgg
gggagtctcacggtgatggaagctgcacattttttcgaagggaccgagaagctgctggag
gtttggttctcccggcagcagcccgacgcaaaccaaggatctggggatcttcgcactatc
ccaaggtgggtccccggggcgctcgctgacatccgggcctgggggctgtcgccgccgccg
aggcaccagccacgggtggagcccgagttccctcagctttcagttgggggcaagtctgcg
gcctggggtcgcttcggcggccttggaagtgagagtagcatgtttgtctccaagagacgt
ttcattttgaagacatgtggtaccaccctcttgctgaaagcactggttcccctgttgaag
cttgctagggattacagtgggtttgactcaattcaaagcttcttttattctcgtaagaat
ttcatgaagccttctcaccaagggtacccacaccggaatttccaggaagaaatagagttt
cttaatgcaattttcccaaagagtcgggtaatcagtcagccagatcaaaccttggaaatt
ctgatgagtgagcttgacccagcagttatggaccagttctacatgaaagatggtgttact
gcaaaggatgtcactcgtgagagtggaattcgtgacctgataccaggttctgtcattgat
gccacaatgttcaatccttgtgggtattcgatgaatggaatgaaatcggatggaacttat
tggactattcacatcactccagaaccagaattttcttatgttagctttgaaacaaactta
agtcagacctcctatgatgacctgatcaggaaagttgtagaagtcttcaagccaggaaaa
tttgtgaccaccttgtttgttaatcagcctccgctggtgatacccaggcaaacagggtct
ggagtggacctccagcaaactccaacagacttgcagctgagggtcctgactgttagaagg
aacactaacaaacaggacatctacaccaaaaccctatctgcacgtcaccatcatcaaaga
ccaaaggaacgcaactcctcaccagcaatggaacaaagctggatggagaatgactttgat
gagctgagagaagaaggcttcagacgatcggtaataacaacttctccgagctaa

>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_2|220_aa
MSELPFTIASKRIKYLGIQLTRDVKDLFKENYKPLLNEIKEDTNKWKNIPCSWIGRINIV
KVAILPKVLYRFNAIPIKLPMTFFMELEKTTLKFIWNKKRACIAKRVLSQKNKAGGITLH
DFKLYYKATVTKTAWYSYQNRDIDQWNTTEPSEIIPHIYNHLIFDKPDKNKKWRKDSLFN
KWCWENWLAICRELKLDPFLTPYTKINSRQIKDLNVRPKP

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_2|663_bp
atgagtgaactcccattcacaattgcttcaaagagaataaaatacctaggaatccaactt
acaagggatgtgaaggacctcttcaaggagaactacaaaccactgctcaatgaaataaaa
gaggacacaaacaaatggaagaacattccatgctcatggataggaagaatcaatatcgtg
aaagtggccatactgcccaaggtactttatagattcaatgccatccccatcaagctacca
atgactttcttcatggaattggaaaaaactactttaaagttcatatggaacaaaaaaaga
gcctgcattgccaagagagtcctgagtcaaaagaacaaagctggaggcatcacgctacat
gacttcaaactatactacaaggctacagtaaccaaaacagcatggtactcgtaccaaaac
agagatatagaccaatggaacacaacagagccctcagaaataataccacacatctacaac
catctgatctttgacaaacctgacaaaaacaagaaatggagaaaggattccctatttaat
aaatggtgctgggaaaactggctagccatatgtagagagctgaaactggatcccttcctt
acaccttacacaaaaattaattcaagacagattaaagacttaaatgttagaccaaaacca
taa

>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_3|131_aa
MGQVWALIHSTLEPFHTNDEEEGKYNEVAEEVTEQVCLPAKAKAAKEEEVHPYPSASSHY
FEEKEWPDPPDLSFLEDTGQKVVAPVTVRAAPRVTAFSSTQAGIQCYQLLNNIYRNQLQR
QKQNNWFGGEI

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_3|396_bp
atgggacaagtgtgggctctgattcattccaccttggaaccttttcacactaatgatgag
gaggaaggaaagtataacgaagtagcagaagaggtgacagagcaggtttgtttgccagct
aaagctaaagcagcaaaagaggaagaggttcatccctacccttctgcatcctctcattat
tttgaagaaaaagagtggcctgaccctccagatctttcttttctggaggacactgggcaa
aaagtagttgccccagtgactgttcgagcagcacctcgagtgaccgctttcagttctact
caggcaggaatccaatgctatcagctgctgaacaacatctacagaaaccagctgcaaaga
cagaagcagaacaactggtttggtggagagatctga

>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_4|133_aa
MIPKGGRKGGHKGWARQYTSPEEIDTQLQSEKQKAREEEEQKEGGDGAAGDPKKEKKSLD
SDESEDEDDYQQRRKGVEGLIDIENPNRVAQTTKKVTQLDLDGPKELLRREREEIEKQKA
KERYMKMHLAGKR

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_4|402_bp
atgatacctaaaggagggagaaagggaggccacaaaggctgggcgaggcaatatacaagc
cctgaggagatcgacacgcagctgcagtctgagaagcagaaggccagggaagaagaggag
caaaaagaaggtggagacggggctgcaggtgaccccaaaaaggagaagaaatctctagac
tcagatgagagtgaagatgaagatgactaccagcaaaggcgcaaaggtgttgaagggctc
attgacatcgagaatcccaaccgggtggcacagacaaccaaaaaggtcacacaactggat
ctggatgggccaaaggagcttttgaggagagaacgagaggagattgagaagcagaaggca
aaagagcgttacatgaaaatgcacttggctgggaagagatag

>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_5|427_aa
MAAAADERSPEDGEDEEEEVEQLVLVELSGIIDSDFLSKCENKCKVLGIDTERPILQVDS
CVFAGEYEDTLGTCVIFEENVEHADTEGNNKTVLKYKCHTMKKLSMTRTLLTEKKEGEEN
IGGVEWLQIKDNDFSYRPNMICNFLHENEDEEVVASAPDKSLELEEEEIQMNDSSNLSCE
QEKPMHLEIEDSGPLIDIPSETEDALYEAVPGSGVTRSFRFRLFRRTKPKTKRAKRFLEK
REPKLNENIKNAMLIKGGNANATVTKVLKDVEFFSKKSDCSLFMFGSHNKKRPNNLVIGR
MYDYHVLDMIELGIENFVSLKDIKNSKCPEGTKPMLIFAGDDFDVTEDYRRLKSLLIDFF
RGPTVSNIRLAGLEYVLHFTALNGKIYFRSYNYLRLKMEGFKMEEVKTTKPIAKIRTTKE
DTFPVER

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_5|1284_bp
atggcggcggcggcggacgagcggagtccagaggacggagaagacgaggaagaggaggta
gagcagttggttctggtggaattatcaggaattattgattcagacttcctctcaaaatgt
gaaaataaatgcaaggttttgggcattgacactgagaggcccattctgcaagtggacagc
tgtgtctttgctggggagtatgaagacactctagggacctgtgttatatttgaagaaaat
gttgaacatgctgatacagaaggcaataataaaacagtgctaaaatataaatgccataca
atgaagaagctcagcatgacaagaactctcctgacagagaagaaggaaggagaagaaaac
ataggtggggtggaatggctgcaaataaaggataatgatttctcctatcgacccaacatg
atttgtaactttctacatgaaaatgaagacgaagaagtggtagcttcagccccagataaa
tctttggaattggaagaggaagagattcaaatgaacgacagttcaaacctgagttgtgaa
caggagaaaccaatgcacttggaaatagaagattctggtcctcttattgatataccttct
gagacagaagacgccctctacgaggccgtccccggaagtggcgttacgcgcagcttccgg
ttccgcctgttccggcgcacaaagcccaaaacgaaaagagccaagagattccttgagaag
agagaaccgaaactcaatgaaaatattaaaaatgccatgctgattaaagggggaaatgca
aatgcaacagtgacaaaagtacttaaagatgtggaattcttttcaaagaagtcagattgt
tctttattcatgtttggctcccataataagaagcggccaaataatctagtaataggtcgt
atgtatgactaccatgtgctggatatgattgaattaggtattgagaattttgtctctcta
aaagacattaagaacagtaaatgtcctgagggaacaaaacccatgctgatatttgctggc
gatgatttcgatgtaacagaagattatagaagactaaaaagtcttcttattgatttcttc
agaggccccacagtatcaaatatccgcctggctggattagagtatgttctgcacttcact
gcactgaatgggaagatttactttcgaagctataactacttaaggctaaaaatggaaggc
ttcaaaatggaagaagttaaaactactaaacccattgctaagatccgaacaacaaaggaa
gatactttcccggtagagcgttga

>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_6|196_aa
MWNYLSYEEKKYMMGDAPDYDRSQWLNEKFKLGLDFPNLPYLIDGAHKITQSKAILGCIA
YKHNLCGETEGEKIWEDILENQLVDNHVQLARLCYNPDFKKLKPEYLEALPAMLKLYSQF
LGKQLLFLGDKITLVDFIAYGILERNQVFEPKWLDAFPNLKDFISRFEGLEISAYMKSSC
FLLRPVFTKMAVWGNK

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_6|591_bp
atgtggaactacttaagctatgaggaaaagaagtacatgatgggggacgctcctgactat
gacagaagccagtggctgaatgaaaaattcaagctgggcctggactttcccaatctgccc
tacttgattgatggggctcacaagatcacccagagcaaggccatcctgggctgcattgcc
tacaagcacaacctgtgtggggagacagaaggggagaagatttgggaagacattttggag
aaccagcttgtggacaaccacgtgcagctggccagactctgctacaacccagattttaag
aaactgaagccagaatacctggaggcactccctgcaatgctgaagctctactcacagttt
ctggggaagcagctattgtttcttggggacaagatcacacttgtggatttcatcgcgtat
ggcatccttgagagaaaccaagtatttgagcccaagtggttggacgccttcccaaacctg
aaggacttcatctcccgatttgagggcttggagatctctgcctacatgaaatccagctgc
ttcctcctgagacctgtgttcacaaagatggctgtctggggcaacaagtag

>gi568815592f:110858770_111067787|GENSCAN_predicted_peptide_7|322_aa
MIISIDAEKAFDKIQQPFMLKTLNEVGIDGTYLKIISAIYDKPTTNIILNGQKVEAFPLK
TDTRQGCPLSPLLFNIVLEVLAREIRQEKEIKGIQLGKEEIKLSPFADDMIVHLENPIVS
SQNLLKLISNFSKVSGYKINMQKSQTFLYTNNRQTESQIMSELPFTIATKRKKYLGIQLT
RDVKDLFKENYKPLLNEIKEDINKWKNIPCSWIGRNNVMKMAILPKVIYRFNAVPIKLAL
TFFTELEKKKTTLNFIWNQKRARIAKTILSKKNKAGGITLHDFKLYYKATVTKTAWYRYQ
NRYVDQWNRTEASEIKTISTAI

>gi568815592f:110858770_111067787|GENSCAN_predicted_CDS_7|969_bp
atgattatctcaatagatgcagaaaaggccttcgacaaaattcaacagcccttcatgcta
aaaactctcaatgaagtaggtattgatggaacatatctcaaaataataagtgctatttat
gacaaacccacaaccaatatcatattgaatgggcaaaaggtggaagcattccctttgaaa
accgacacaagacaaggatgccctctctcaccactcctattcaacatagtattggaagtt
ctggccagggaaatcaggcaggagaaagaaataaagggtattcagttaggaaaagaggaa
atcaaattgtccccgtttgcagatgacatgattgtacatttagaaaaccccatcgtctca
tcccaaaatctccttaagctgataagcaacttcagcaaagtctcaggatacaaaatcaat
atgcaaaaatcacaaacattcctatataccaataatagacaaacagagagccaaatcatg
agtgaactcccattcacaattgctacaaagagaaaaaaatacctaggaatacaacttaca
agggatgtgaaggacctcttcaaggagaactataaaccactgctcaacgaaataaaagag
gacataaacaaatggaagaacattccatgctcatggataggaagaaacaatgtcatgaaa
atggccatactgcccaaggtaatttatagattcaatgctgtccccatcaagctagcactg
actttctttacagaattggaaaaaaaaaaaactactttaaatttcatatggaaccaaaaa
agagcccgcattgcaaagacaatcctaagcaaaaagaacaaagctggaggcatcacacta
catgacttcaaactatactacaaagctacagtaaccaaaacagcatggtaccggtaccaa
aacagatatgtagaccaatggaacagaacagaggcctcagaaataaaaaccatatctaca
gccatctga