GENSCAN 1.0	Date run:  4-Nov-116	Time: 02:29:39

Sequence gi568815591r:98285797_98486584 : 200788 bp : 47.72% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Init +    428    481   54  1  0   92   73    38 0.700   3.57
 1.02 Intr +   6284   6459  176  1  2   80  101    76 0.701   6.84
 1.03 Intr +   9510   9678  169  0  1  106   50    60 0.469   3.95
 1.04 Intr +  10185  10309  125  2  2   82   41    66 0.405   0.68
 1.05 Term +  11179  11284  106  1  1  126   48    61 0.589   3.78
 1.06 PlyA +  12273  12278    6                               1.05

 2.00 Prom +  12490  12529   40                              -6.26
 2.01 Init +  16077  16218  142  2  1   74  111    24 0.727   3.86
 2.02 Term +  16328  16557  230  0  2   42   34   159 0.271   2.69
 2.03 PlyA +  16605  16610    6                               1.05

 3.11 PlyA -  17733  17728    6                               1.05
 3.10 Term -  18298  18239   60  1  0  107   33    10 0.260  -4.80
 3.09 Intr -  18580  18400  181  0  1   -2   76   169 0.340   6.57
 3.08 Intr -  20720  20643   78  1  0   73   63   104 0.508   5.07
 3.07 Intr -  22100  21893  208  0  1   76   88   304 0.854  27.34
 3.06 Intr -  22274  22229   46  2  1   94   56    20 0.528  -2.62
 3.05 Intr -  26468  26301  168  2  0   81   46   139 0.682   9.14
 3.04 Intr -  29816  29664  153  2  0   92   94   107 0.984  11.97
 3.03 Intr -  34333  34262   72  1  0   74  111    56 0.971   6.10
 3.02 Intr -  34502  34441   62  0  2   91   63    98 0.965   6.05
 3.01 Init -  37041  36996   46  0  1   56   53    58 0.344  -0.06
 3.00 Prom -  41190  41151   40                              -4.16

 4.00 Prom +  49630  49669   40                              -0.16
 4.01 Init +  53769  53892  124  2  1  112   38   135 0.968   9.27
 4.02 Term +  55191  55312  122  1  2  136   43   -20 0.433  -3.06
 4.03 PlyA +  56012  56017    6                               1.05

 5.00 Prom +  60338  60377   40                              -2.96
 5.01 Sngl +  63480  63755  276  2  0   39   43   183 0.841   4.28
 5.02 PlyA +  64878  64883    6                               1.05

 6.06 PlyA -  65967  65962    6                               1.05
 6.05 Term -  68775  68711   65  1  2   77   42    65 0.788  -1.15
 6.04 Intr -  69332  69246   87  0  0   70   80   115 0.684   8.84
 6.03 Intr -  76636  76561   76  1  1   90  127    58 0.302   8.99
 6.02 Intr -  93578  93463  116  0  2   76   46   115 0.743   6.27
 6.01 Init -  95283  95238   46  0  1   84   62    59 0.540   3.74
 6.00 Prom -  96858  96819   40                              -6.76

 7.03 PlyA -  96866  96861    6                               1.05
 7.02 Term - 100438  99998  441  1  0  -11   39   478 0.934  28.26
 7.01 Init - 100788 100585  204  0  0  113   81   213 0.825  21.95
 7.00 Prom - 107409 107370   40                              -5.06

 8.06 PlyA - 107561 107556    6                               1.05
 8.05 Term - 108667 108557  111  1  0  102   44     0 0.158  -4.44
 8.04 Intr - 112508 112357  152  0  2   77   89    34 0.262   2.28
 8.03 Intr - 112976 112826  151  2  1   86   77    14 0.303  -0.16
 8.02 Intr - 115321 115006  316  0  1  113  102   206 0.234  20.57
 8.01 Init - 148833 148706  128  0  2   55   62   192 0.363  12.93
 8.00 Prom - 152088 152049   40                              -1.36

 9.04 PlyA - 152920 152915    6                               1.05
 9.03 Term - 158557 158321  237  1  0   89   37    82 0.035  -0.63
 9.02 Intr - 167560 167437  124  0  1   51   90    55 0.440   2.59
 9.01 Init - 168810 168419  392  0  2   86   62   439 0.595  37.35
 9.00 Prom - 180426 180387   40                              -1.16

10.05 PlyA - 180712 180707    6                               1.05
10.04 Term - 185371 185270  102  1  0   72   43    90 0.493   1.18
10.03 Intr - 186647 186589   59  0  2  101  110     3 0.525   2.40
10.02 Intr - 191153 190908  246  0  0   90   34   122 0.227   4.43
10.01 Intr - 198293 198105  189  0  0   72   48    75 0.089   1.46

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Intr -  34209  34049  161  0  2   51   80   106 0.834   4.89


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_1|209_aa
MAFSLGSSEPCCQPPLSLEKQMVTLLDLAGRSLKHRPRPLAYLHVTFPNLSLIGYYTYGK
AKGEGISHSPSTQQHTRSPGQGIWGQFIVCFSSLEHKATDLPCTSYRALNGRKSDFLRGT
QRFPSRPQRKSLLEQAGHTPMGTETLGQPWRNSPDQKHQTPVNGRVRTSFCADSSGGHLQ
ATGSTATGTQGPAGTACCMSCVPNKTGDH

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_1|630_bp
atggccttctccctgggcagctcagagccctgctgccagccccctctgtccttggagaag
cagatggtaacactgctggacctggctggaaggagcctgaagcatcggccacgtccactg
gcttacctgcatgtaacctttcccaatctcagcctcataggatactacacttatggcaag
gctaaaggagaggggataagtcacagccccagcacccagcaacacacacgatcccctggg
cagggcatctggggccaattcattgtctgcttttcatcactggagcacaaagccactgac
ctgccttgcacatcctacagggctttaaatggccgcaaaagtgacttcctgcggggcact
caacgcttccctagcaggcctcagaggaagtccttgctggaacaagcagggcacacaccc
atgggcaccgagacactcgggcagccctggagaaacagcccagaccagaaacaccagacg
cccgtcaatgggagagtcagaaccagcttctgtgcagacagcagtgggggacacctccaa
gccacaggcagcactgccaccggcacccagggccccgcgggcactgcctgctgcatgtcc
tgtgtccccaacaagacaggagaccactaa

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_2|123_aa
MGQLRWWRLQGTRSPPAGSPSSAQPSRSGPSGTVVCLKLCCPRKWEAVLSKEESVITEYT
DTYNQASSIYPIPCSKNGGDSTFFTKLYPHDKYADNDTFSFSNTEDYPGLAKVSVLSLTM
PEL

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_2|372_bp
atgggccagctgcgctggtggaggctgcagggcaccaggtcaccccctgcaggcagcccc
agctcagcccaaccctccaggtcagggccctcggggacagtggtgtgcttaaagctctgc
tgcccgaggaagtgggaagccgtgctaagtaaggaggaatctgtcattactgagtacact
gatacttacaaccaggcttcttccatttatccaattccctgcagtaagaatggcggcgac
agtactttcttcaccaagctttatccacacgataaatacgctgacaatgacacgttttca
ttttctaacactgaagactatccagggttggccaaagtgtcagtgctctcacttacaatg
ccagagctgtga

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_3|357_aa
MLRLHFGKIPGICEEGHVLIEISSTHKKLNESLDENFKKFHKEIIHELEKKIELDVKYMN
YVETVTSRQSEIQKFIADGCKEALLEEKRRFCFLVDKHCGFANHIHYYHLQSAELLNSKL
PRWQETCVDAIKVPEKIMNMIEEIKTPASTPVSGTPQASPMIERSNVSLFLLGNDQSEEI
GQGTSEDPSLQRSVSVATGLNMMKKQKVKTIFPHTAGSNKTLLSFAQGDVITLLIPEEKD
GWLYGEHDVSKARGWFPSSYTKLLEENETEAVTVPTPSPTPVRSISTVNLSENSSVVIPP
PDYLECLSMGAAADRRADSARTTSTFKAPASKPETAAPGESGVPGEEGGGDLLPLIL

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_3|1074_bp
atgttacgcctgcattttggaaagatccctggcatctgtgaggaaggacatgtcctcata
gagatttcaagtacccacaagaaactcaacgagagtcttgatgaaaattttaaaaaattc
cacaaagagattatccatgagctggagaagaagatagaacttgacgtgaaatatatgaac
tatgtggagaccgttacttctcgtcagagtgaaatccagaaattcattgcagatggttgc
aaagaggctctgcttgaagagaagaggcgcttctgctttctggttgataagcactgtggc
tttgcaaaccacatacattattatcacttacagtctgcagaactactgaattccaagctg
cctcggtggcaggagacctgtgttgatgccatcaaagtgccagagaaaatcatgaatatg
atcgaagaaataaagaccccagcctctacccccgtgtctggaactcctcaggcttcaccc
atgatcgagagaagcaatgtgtccctgttccttctgggcaatgatcaaagcgaggaaata
ggacagggtacttccgaagatcccagtttacagcgatcagtttcggttgcaacgggactg
aacatgatgaagaagcagaaagtgaagaccatcttcccgcacactgcgggctccaacaag
accttactcagctttgcacagggagatgtcatcacgctgctcatccccgaggagaaggat
ggctggctctatggagaacacgacgtgtccaaggcgaggggttggttcccgtcgtcgtac
acgaagttgctggaagaaaatgagacagaagcagtgaccgtgcccacgccaagccccaca
ccagtgagaagcatcagcaccgtgaacttgtctgagaatagcagtgttgtcatcccccca
cccgactacttggaatgcttgtccatgggggcagctgccgacaggagagcagattcggcc
aggacgacatccacctttaaggccccagcgtccaagcccgagaccgcggctcctggggag
agtggtgtccccggggaggagggaggaggggacttgctgcctttgatcctctag

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_4|81_aa
MVCPGMRLAWPGLTRFMILAASIFEYPSLQPVTGATPFAATCFINYNPTFLIILAETFPV
PKGRRKNIHPKIEMRKATFKV

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_4|246_bp
atggtgtgcccgggaatgcggctggcgtggccaggcctcactcgcttcatgattctagcc
gcatccatctttgagtatccctctcttcagcctgtcacgggagctacgccctttgctgct
acctgttttataaattataaccctacctttctaattattctagctgagacctttcctgtt
ccaaaagggagaagaaagaacatccacccaaaaattgagatgagaaaagccaccttcaag
gtctaa

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_5|91_aa
MRQQKCPARGGHIRRPVFLYGSTWRKGREILLRRHKSGAILLRRATPTLRLCDFHYPYPV
TPGVYGWNPSETTISKGTVTANHDTCQPFRH

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_5|276_bp
atgagacaacagaagtgcccggcacgcggtggacacatccggagacccgtgtttctgtat
ggaagcacgtggcgcaagggcagggaaatacttctaagacggcacaagagcggagcaata
cttctaagaagagccacgcccacgctacgcctctgtgatttccactatccttaccccgta
actcctggcgtttatggttggaaccccagtgaaaccaccatttccaaggggactgtgacc
gctaatcatgacacctgccagccattcagacactaa

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_6|129_aa
MAVDGSIGINALQTSAMCSDELVELRVQPAAGSSVGAGISYEIQVSEPAAAENTNVMEQF
NPGLRNLINLGKNYEKAVNAMILAGKAYYDGVAKIGEIATGSPVSTELGREGGYTLGSAR
CRGDLGFCL

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_6|390_bp
atggctgtggacggctccataggcataaatgctttgcagaccagtgcgatgtgttcagat
gagctggtggagctgagggtacagcctgcagctggttcgtccgtgggtgcaggcatctct
tatgaaatacaggtgtcagaacctgctgctgctgagaacactaatgttatggaacagttc
aatcctgggctgcgaaatttaataaacctggggaaaaattatgagaaagctgtaaacgct
atgatcctggcaggaaaagcctactacgatggagtggccaagatcggtgagattgccact
gggtcccccgtgtcaactgaactgggcagagagggcggttacaccctgggcagtgcccgc
tgccgaggggatctgggcttctgtttatag

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_7|214_aa
MAVGKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFSIRNIGKTLVTRTQGTKIASD
GLKGRVFETMIEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMIE
IMTREVQTNDLKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKMLKKPKFELGKLME
LHGEGSSSGKATGDETGAKVERADGYEPPVQESV

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_7|645_bp
atggcggttggcaagaacaagcgccttacgaaaggcggcaaaaagggagccaagaagaaa
gtggttgatccattttctaagaaagattggtatgatgtgaaagcacctgctatgttcagt
ataagaaatattggaaagacgctcgtcaccaggacccaaggaaccaaaattgcatctgat
ggtctcaagggtcgtgtgtttgaaacaatgattgaagctcacgttgatgtcaagactacc
gatggttacttgcttcgtctgttctgtgttggttttactaaaaaacgcaacaatcagata
cggaagacctcttatgctcagcaccaacaggtccgccaaatccggaagaagatgatcgaa
atcatgacccgagaggtgcagacaaatgacttgaaagaagtggtcaataaattgattcca
gacagcattggaaaagacatagaaaaggcttgccagtctatttatcctctccatgatgtc
ttcgttagaaaagtaaaaatgctgaagaagcccaagtttgaattgggaaagctcatggag
cttcatggtgaaggcagtagttctggaaaagccactggggacgagacaggtgctaaagtt
gaacgagctgatggatatgaaccaccagtccaagaatctgtttaa

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_8|285_aa
MNALGHKTAKRMENTVNQETRSSMDEEVQAEDQQTAVTERVSRWGRPARPASSGGVRPLL
LCSSKKARAALPQVLTFSQRRRARALSGRRLRRRPTLQSPLVAPRPSRCPESGGHEAQPR
PPALARPAAAAMSRGPEEVNRLTESTYRTFSNNSLEGPYQGELQRHKCQPLGHVLLPKER
KRQGKSVDFIILVIRICRPLPHDVQAENSLSLIWQKSGSVDESSAFKKRCPLYYLTIYHI
LLIEMQHNQGVCNLGREPCGKSFMSEDKPRPRKFWSERPYSCGSH

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_8|858_bp
atgaacgccctcgggcacaagacggcaaaaagaatggagaacacggtcaaccaggagacc
aggtcctcaatggatgaggaggtacaagcggaagaccagcagacagcagtcaccgagagg
gtcagcaggtggggccgcccggcccgcccagcttcctctggcggcgtccggccgcttctc
ctctgctcctcgaagaaggccagggcggcgctgccgcaagttttgacattttcgcagcgg
agacgcgcgcgggcactctcgggccgacggctgcggcggcggccgaccctccagagcccc
ttagtcgcgccccggccctcccgctgcccggagtccggcggccacgaggcccagccgcgt
cctcccgcgcttgctcgcccggcggccgcagccatgtcccgggggcccgaggaggtgaac
cggctcacggagagcacctaccggacttttagtaataactccttagagggaccgtaccaa
ggcgaattgcagcgtcacaaatgccaaccacttgggcatgtcttattacccaaagaacgg
aaacggcagggaaaaagtgtggatttcatcattttggttatacgtatttgtagacccctg
ccccatgatgttcaagctgaaaacagtttaagcttaatatggcaaaaatctggcagtgtt
gatgaatctagtgcttttaagaagagatgtcctctatattacctaaccatctaccatatt
ttactaatagaaatgcaacacaaccagggtgtatgtaaccttggcagggagccctgtggg
aaatccttcatgtcagaagacaaaccaagacctaggaaattctggtctgagaggccatac
agttgtggtagtcactag

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_9|250_aa
MVNPTVFFDIAVIDEPLGRVSFKLFADKFPKTTENFHALSTGEKGYGYKGSCFHSIIPGF
MCQGGDFTLLNGTGGKSIYREKFDDENFILKHTGPGILSMANAGLNTNGSQFFICTAKTE
WWMAGMWSLASKLTTTGTSQGELMDRTTVSATGILSPSRNDSKFLRNGTPLKSGLLPDVD
DLRNHLHLTGEYPGPAVKVHKPVTLFSFLPSSLAQLPAVAPYPTSQLWPNLHRAASVICS
ISNEIVQSSS

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_9|753_bp
atggtcaaccccaccgtgttcttcgacattgctgttatcgacgagcccttgggccgcgtc
tccttcaagctgtttgcagacaagtttccaaagacaacagaaaactttcatgctctgagc
actggagagaaaggatatggttataaaggttcctgctttcacagcattattccagggttt
atgtgtcagggcggtgacttcacactccttaatggcactggtggcaagtccatctacagg
gagaaatttgatgatgagaacttcattctaaagcatacaggtcctggcatcttgtccatg
gcaaatgctggactcaacacaaatggttcccagttcttcatctgcacggccaagactgag
tggtggatggcaggcatgtggtctttggcaagcaaactcaccacaactggcacatcccaa
ggagagctcatggataggaccacagtgtctgccaccggaatcctttctccatcaagaaat
gactccaagttcttaagaaatgggacacctcttaagagcggccttttgcccgatgtcgat
gatctgcgaaatcatttacatctaacaggagaatacccaggcccagccgtgaaagtccac
aagcctgtgacacttttttcttttttaccatcatccctggcccagcttcctgcagtggcc
ccgtaccccacctcccaactttggcctaatctccatagagcagccagcgtgatctgttct
atcagcaatgagatcgtgcagtcctcttcataa

>gi568815591r:98285797_98486584|GENSCAN_predicted_peptide_10|198_aa
XWDVEGLLVPYPLAESGPRFETRIMKAPGWLPLPLGGQLPDGVNEEVRMQQRLKDGRIEI
ARDCMIRLELYWRSRKRALRKQSVPPCVTNHLARREDKRVLNAIASSRGTAEKIQGVILQ
LSRGQESSKHTPPPPMILRVHPDHQAQPRLPVGASHLAPSPPKDQKRSSREPAQPGNPEE
ITYQIEERQPSLKAPPTT

>gi568815591r:98285797_98486584|GENSCAN_predicted_CDS_10|597_bp
ngatgggacgtagaaggccttcttgtaccctacccattggctgaatctggccccagattt
gagacccggataatgaaagcccctggatggcttcccctgcccttggggggacaactcccc
gatggggttaatgaagaggtcagaatgcagcagaggctgaaagatgggaggatagagatt
gcccgagactgcatgatccgcttagaactttattggagatctcgtaaaagagcccttagg
aaacaatcagtgcctccatgtgtcaccaatcacttagcacgcagagaggacaaacgagtg
ctaaatgcaattgccagttcccgtggcactgcagagaaaattcaaggtgtcatcctgcag
ctttcccggggtcaagaaagctccaaacacaccccccccccacccatgatcctaagagtc
catcctgaccaccaagcccagcctcgactccctgttggggccagccatcttgccccttct
ccaccaaaggaccagaagcgctcctcccgagagccagctcagcctggcaaccctgaagaa
atcacttatcaaatcgaggagcgccagccttccctcaaggcaccccctactacctaa