GENSCAN 1.0	Date run:  7-Nov-116	Time: 21:22:14

Sequence gi568815591r:22673649_22873993 : 200345 bp : 41.76% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +   7096   7238  143  2  2   38   63   118 0.717   3.45
 1.02 Term +  11279  11425  147  1  0   54   41   193 0.889   8.12
 1.03 PlyA +  12095  12100    6                               1.05

 2.03 PlyA -  12134  12129    6                               1.05
 2.02 Term -  16782  16685   98  1  2   95   39    78 0.531   0.75
 2.01 Init -  21532  21328  205  1  1   69   62   166 0.792  11.16
 2.00 Prom -  22305  22266   40                              -8.15

 3.00 Prom +  23068  23107   40                              -8.25
 3.01 Init +  26610  26694   85  2  1   51   99    89 0.332   7.33
 3.02 Intr +  30051  30286  236  1  2   75   94    10 0.200  -3.22
 3.03 Intr +  30397  30793  397  0  1   83   90   118 0.463   4.73
 3.04 Term +  31857  32071  215  1  2   58   47   167 0.414   6.01
 3.05 PlyA +  34870  34875    6                               1.05

 4.00 Prom +  39694  39733   40                              -2.55
 4.01 Init +  40781  40875   95  1  2   34  100    89 0.154   4.60
 4.02 Intr +  52695  53020  326  0  2   29   27   204 0.454   2.89
 4.03 Intr +  53796  53986  191  1  2   93   90   216 0.707  20.68
 4.04 Intr +  55045  55158  114  0  0   85   66   105 0.896   7.72
 4.05 Intr +  55866  56012  147  2  0  102   98   112 0.932  13.11
 4.06 Term +  57758  57925  168  1  0   94   39   201 0.998  12.70
 4.07 PlyA +  58248  58253    6                               1.05

 5.00 Prom +  60185  60224   40                              -6.55
 5.01 Sngl +  67529  67933  405  1  0   91   38   147 0.746   6.03
 5.02 PlyA +  68259  68264    6                               1.05

 6.03 PlyA -  68304  68299    6                               1.05
 6.02 Term -  93173  93044  130  1  1  -23   37   186 0.074  -0.93
 6.01 Init - 100345 100002  344  1  2   75   75   362 0.148  30.35
 6.00 Prom - 115514 115475   40                              -5.25

 7.03 PlyA - 115917 115912    6                               1.05
 7.02 Term - 122415 121967  449  1  2  -17   47   260 0.481   5.79
 7.01 Init - 122899 122800  100  1  1  100  113    49 0.404   9.08
 7.00 Prom - 132001 131962   40                              -4.55

 8.00 Prom + 137608 137647   40                              -2.65
 8.01 Init + 141695 141771   77  1  2   67   53    21 0.175  -2.88
 8.02 Intr + 146289 146411  123  0  0   63   64   113 0.311   5.18
 8.03 Intr + 148452 148555  104  0  2   72  110    55 0.175   5.00
 8.04 Intr + 149001 149032   32  1  2   80   99    11 0.168  -1.67
 8.05 Intr + 149123 149203   81  1  0   53   69   123 0.159   5.82
 8.06 Term + 159887 160042  156  1  0  120   55    71 0.806   3.95
 8.07 PlyA + 160575 160580    6                               1.05

 9.05 PlyA - 161096 161091    6                               1.05
 9.04 Term - 171062 170892  171  2  0   27   54   118 0.245  -0.86
 9.03 Intr - 172998 172897  102  0  0   94   92    57 0.506   6.15
 9.02 Intr - 180205 180012  194  2  2   60   46   130 0.254   4.29
 9.01 Init - 191708 191438  271  2  1   68   14   254 0.715  13.18

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Sngl - 100345  99998  348  1  0   75   49   365 0.841  27.09


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_1|96_aa
XVFQKHTQIPGKTIPTLLTVFLTNTLAPVPEAPAPPVVIAPPINQKEKGVIQKASSSPSS
PSSSSHLLSCTECSSKFPSDPDENENLHMPREEAEA

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_1|291_bp
ngagtcttccaaaaacacacccaaattcctggaaaaaccatccccaccctattaacagtc
ttcctcactaacaccctggccccagtacctgaagccccagccccgccagttgtcatagct
ccaccaattaatcagaaagagaagggtgtgattcaaaaagcatcatcatcaccatcatca
ccatcatcatcatcacacctgctttcctgcacagaatgttcctcaaagtttccaagtgac
ccagatgaaaacgagaacctgcacatgcccagagaggaagcagaagcttaa

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_2|100_aa
MEYRKQKIHRCGEGKGNLLESGEGRSQDDDYTLIEEGSQYRLEHRDSGGGLSTVIAKSSA
IILVFLKTAVFRSSSCFQDRVWAVEDIPGRLRMHAGVSSP

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_2|303_bp
atggaatacagaaagcagaagatccatcgctgtggagaagggaaagggaatctcctggag
agtggtgaagggagatcccaggatgacgattacacattaattgaagagggcagtcagtac
agattggaacatcgtgactcaggaggtggcttgagtactgtcattgccaaatcttctgcc
attatacttgtctttttaaaaactgcagtcttcaggagcagcagctgcttccaagacagg
gtttgggcagttgaagatattcctggtcggctgaggatgcatgcaggtgttagcagtcct
tag

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_3|310_aa
MESMTARFLLGLKEEDSSAGKSWEGGQAGEINSLVAHTKPVWWSLHTDAHEIWCHDSNRG
TSLGGWGISLGRSIPCPPALCSMKKIHLRPWVLRPTSPRNISLILNWFLSFSGRDRRRIL
SVDPKLWCLSRTREDSLPLMFITRGRLPDYSPTFQRCPTTQGRLPWSFTLSSKYRFSGGQ
EPPNPFSFTLSGKCRFSRGQEPPDPLFPRPDPLSPHPDPLSLCPNPLFPHPDPFPTFLEG
ACYKCWKSGHCAKECPQPRIPPKPCPICAGPPRKSDCSTHLAATSRAPGTLAQGSLTDSF
PDLLGLAAED

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_3|933_bp
atggaatccatgactgccaggtttttactggggcttaaggaggaagacagtagcgctggc
aaaagctgggaaggaggacaggcaggtgaaataaacagccttgttgctcacacaaagcct
gtttggtggtctcttcacacggacgcacatgaaatttggtgccatgactcgaatcggggg
acctccttgggaggttgggggatctcccttgggagatcaatcccctgtcctcctgctctt
tgctccatgaaaaagatccacctacgaccttgggtcctcagacccaccagcccaaggaac
atctcactaattttaaattggttcctttccttttctggtagagacaggagacgcatttta
tctgtggacccaaaactctggtgcctgtcacggactcgggaagacagtcttcccttgatg
tttatcacgcgaggacgcctgcctgattattcacccacgtttcagaggtgtccaaccacg
cagggacgactgccttggtccttcacccttagcagcaagtaccgcttttctggggggcaa
gaaccccccaaccccttctccttcaccctgagtggcaagtgccgcttttctagggggcaa
gaaccccccgatcccttatttccacgccctgaccccttatctccacaccctgacccctta
tctctgtgccccaaccctttatttccacaccccgacccctttcccacttttctggaggga
gcttgctacaagtgctggaaatctggccactgcgccaaggaatgcccacagcccaggatt
cctcctaagccgtgtcccatctgtgcgggacccccaagaaaatcggactgttcaactcac
ctggcagccacttccagagcccctggaactctggcccaaggctctctgactgactccttc
ccagatcttctcggcttagcagctgaagactga

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_4|346_aa
MQVDQPLGCPECKRELRVGDINLAVICVKEKRCPSETVVKRLSGNGESTGSTRQTSGTES
KVLTGRIPKGSLGRGQGSSQPPLSGLKQVKKVAEATRWQKGVTHSTWRRLEVTARNLRMA
RQFYNSRSQGEPEHRRTQMTGAFGPVAFSLGLLLVLPAAFPAPVPPGEDSKDVAAPHRQP
LTSSERIDKQIRYILDGISALRKETCNKSNMCESSKEALAENNLNLPKMAEKDGCFQSGF
NEETCLVKIITGLLEFEVYLEYLQNRFESSEEQARAVQMSTKVLIQFLQKKAKNLDAITT
PDPTTNASLLTKLQAQNQWLQDMTTHLILRSFKEFLQSSLRALRQM

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_4|1041_bp
atgcaagtggatcagccactgggctgtccagaatgcaagagagaactcagagttggggac
ataaacttggcagtcatctgtgtaaaagagaaaaggtgccccagtgaaacagtggtgaag
agactcagtggcaatggggagagcactggcagcacaaggcaaacctctggcacagagagc
aaagtcctcactgggaggattcccaaggggtcacttgggagagggcagggcagcagccaa
cctcctctaagtgggctgaagcaggtgaagaaagtggcagaagccacgcggtggcaaaaa
ggagtcacacactccacctggagacgccttgaagtaactgcacgaaatttgaggatggcc
aggcagttctacaacagccgctcacagggagagccagaacacagaagaactcagatgact
ggcgccttcggtccagttgccttctccctggggctgctcctggtgttgcctgctgccttc
cctgccccagtacccccaggagaagattccaaagatgtagccgccccacacagacagcca
ctcacctcttcagaacgaattgacaaacaaattcggtacatcctcgacggcatctcagcc
ctgagaaaggagacatgtaacaagagtaacatgtgtgaaagcagcaaagaggcactggca
gaaaacaacctgaaccttccaaagatggctgaaaaagatggatgcttccaatctggattc
aatgaggagacttgcctggtgaaaatcatcactggtcttttggagtttgaggtataccta
gagtacctccagaacagatttgagagtagtgaggaacaagccagagctgtgcagatgagt
acaaaagtcctgatccagttcctgcagaaaaaggcaaagaatctagatgcaataaccacc
cctgacccaaccacaaatgccagcctgctgacgaagctgcaggcacagaaccagtggctg
caggacatgacaactcatctcattctgcgcagctttaaggagttcctgcagtccagcctg
agggctcttcggcaaatgtag

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_5|134_aa
MDKWDHVKLKSFRVAKDTINKVKRQPTEWEKISANYPSDKELVIRIYKELKQPCRKKKSN
KSIKIWAKDLNRHFSKEGIQMANRYMKRCSTSLIIREIVSPQSKLLICKRQTITNAGENV
EKRELLYAVGGNVN

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_5|405_bp
atggacaaatgggatcacgtcaagttaaaaagcttccgcgtggcaaaggatacaatcaac
aaagtgaagagacaacccacagaatgggagaaaatatctgccaactacccatctgacaag
gaattagtaataagaatatacaaggagctcaaacaaccctgtaggaaaaaaaaatctaat
aaatcgatcaaaatatgggcaaaagatttgaatagacatttctcaaaagaaggcatacaa
atggcaaacaggtatatgaaaaggtgctcaacatcactgatcatcagagaaattgtctca
ccccagtcaaaactgcttatatgcaaaagacagacaataacaaatgctggcgagaatgta
gagaaaagggaactgttgtatgctgttggtgggaatgtaaattag

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_6|157_aa
MTKKRRNNVRAKKGRGHVQPIRCTNCARCVPKDNAIKKFVIRNIVEAAAVRDISEASVFD
AYVLPKLCVKLHYCVSCVIHSKVVRNRSREARKDRTPPPRFRPAGAAARPPPKPITLTTP
NADKDVKQQELSFIVGGNAKFGGQLVISYKTKHTFTI

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_6|474_bp
atgacaaagaaaagaaggaacaacgttcgtgccaaaaagggccgcggccacgtgcagcct
attcgctgcactaactgtgcccgatgcgtgcccaaggacaacgccattaagaaattcgtc
attcgaaacatagtggaggctgcagcagtcagggacatttctgaagcgagcgtcttcgat
gcctatgtgcttcccaagctgtgtgtgaagctacattactgtgtgagttgtgtaattcac
agcaaagtagtcaggaatcgatctcgtgaagcccgcaaggaccgaacacccccaccccga
tttagacctgcgggtgctgccgcacgtcccccaccaaagcccataacactgacaacacca
aatgctgacaaggatgtgaagcaacaagaactctccttcattgttggtggaaatgcaaaa
tttggaggacagttggtgatttcttacaaaactaaacatacttttaccatatga

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_7|182_aa
MAERGQHRAQAMVSEGGSLKRWQLSCDVVPVSAQDLRECLDAQAEVCCRDGFLIWTASAR
AVQKGNVGWDPPHRVPTGAPPSRAVRRRPPSSRPQNDRSTGSLYHMPGKATDAQCQSMKA
AGREAVSCKATEAELPETMGTYLLHQRDPDVRHGVKGDHFGPLRFDCPAGFRTCVGPVAP
LF

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_7|549_bp
atggctgaaaggggccaacatagagctcaggccatggtttcagagggtggaagcctcaag
cgttggcagctttcatgtgatgttgtgcctgtgagtgcacaagatctacgggaatgcctg
gatgcccaggcagaagtttgttgtagggatgggttcctcatatggacagcctctgctagg
gcagtgcagaagggaaatgtggggtgggatcccccacacagagtccctactggggcacca
cctagtcgggctgtgagaagaaggccaccatcctccagaccccagaatgatagatccact
ggcagcttgtaccacatgcctggaaaagccacagatgctcaatgccagtccatgaaagca
gctgggagggaggctgtatcctgcaaagccacagaggcagagctacccgagaccatggga
acctacctcttgcatcagcgtgacccggatgtgagacatggagtcaaaggagatcatttt
ggacctttaagatttgactgccctgctggatttcggacttgtgtggggcctgtagcccct
ttgttttga

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_8|190_aa
MQVQPKICTRCNALSIPVQRTTKTASTILPEALKVMIEPKLHTKLNPQLLVLVRVEVEEV
KEQPGASQHSCATLAKKFLYGCFLTCKMGAVIEIIQTLHRTVTFPVLLPLTQLHHGDGRV
AQGGPLTATTASGIRKGKEGVFEQTNNFLLPGYSLELLSTPGKHMYEIKFLQRRDSSKSI
TGTPTKCKAL

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_8|573_bp
atgcaggtccagcctaaaatttgtacaagatgcaatgctttgtcaattcctgtccaaagg
accaccaagacggccagcactatactccctgaagcactgaaagttatgattgaacctaaa
ttacacacaaagttaaatccgcagttgctggttttagtgagagttgaggtggaggaagta
aaagaacaacctggagccagtcagcatagctgtgcgaccttggcaaaaaagtttctctac
ggctgtttcctcacctgtaaaatgggggcagtaatagaaatcatccaaacccttcatcgt
acagtcactttcccggttcttctcccactgacccagcttcaccatggcgacggccgtgtg
gcgcagggaggaccccttacagcaaccacagcgtcgggaatccgaaagggaaaggagggt
gtttttgagcagacaaacaatttcttattgccaggatacagcctggaactcttaagcaca
ccaggcaagcatatgtatgaaataaaatttctacaaagaagagattcgtcaaaaagcatc
actgggacaccaaccaagtgtaaggctctgtga

>gi568815591r:22673649_22873993|GENSCAN_predicted_peptide_9|245_aa
MVDGGPDQDIHVEATAGWLEQPGTKRLAGALQRQTLEDKAHYLQIILQSRAKCGDQDRGN
QEAFTGPEVDLRENLEAQLAEKPIRQSEAGNSSNYVAEDWLPLKDVNISGGRGCKLIEEG
LKHGEDSWCLECCMLRMMATARKYLAPKARLCHWTIICSRTGVPNPQAADWYQSEACQEP
GSTAGGERWKRKRYQRPFSLPGTHEQRKDHVRHCEKAAAHTPGRESSPATIPAGTLILDL
ELSEL

>gi568815591r:22673649_22873993|GENSCAN_predicted_CDS_9|738_bp
atggtggatgggggacctgatcaggacatccatgtggaagccacagcagggtggctggag
cagcctggaacaaaacgcctggctggtgctctgcaaaggcagacactggaggacaaagca
cattatctccagataattcttcagtccagagctaagtgcggggatcaggacagaggcaac
caggaggcctttacagggccagaggtggatctcagggagaatctagaagctcagctggct
gaaaaaccaatcaggcagtcagaagctgggaactcgtctaattacgtagcagaagactgg
ctcccgttaaaggatgtgaacattagcggaggtcgggggtgcaaactcatcgaagagggg
ttgaagcacggggaggactcctggtgcctggagtgctgcatgcttagaatgatggccacg
gcccgcaaatatcttgcccccaaagcacgtctgtgtcattggactattatttgctctagg
acaggggtccccaacccccaggctgcagactggtatcagtccgaggcctgtcaggaaccg
ggcagcacagcaggaggcgaacgatggaagaggaagagataccagaggcccttctctctc
cccggcacacatgaacagaggaaagaccatgtgaggcactgcgagaaggcagctgcccat
actccaggaagagagtcctcaccagcaaccatccctgctggtaccttgatcttggacttg
gagctttcagaactgtga