GENSCAN 1.0	Date run:  8-Nov-116	Time: 02:06:41

Sequence gi568815591r:123931864_124132901 : 201038 bp : 37.60% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  21937  22661  725  2  2   76  108   488 0.174  39.82
 1.02 Intr +  23134  23223   90  0  0   94  115    43 0.990   6.87
 1.03 Term +  27621  28106  486  2  0   84   32   252 0.889  12.91
 1.04 PlyA +  28447  28452    6                               1.05

 2.00 Prom +  34582  34621   40                              -4.85
 2.01 Init +  40731  40834  104  2  2   50   93    40 0.132  -1.54
 2.02 Intr +  41667  41749   83  0  2  102   58    79 0.133   4.66
 2.03 Term +  69522  69739  218  1  2   95   46   113 0.205   4.12
 2.04 PlyA +  70339  70344    6                              -0.45

 3.03 PlyA -  70450  70445    6                               1.05
 3.02 Term -  72885  72400  486  0  0   87   45   244 0.995  13.71
 3.01 Init -  82351  82181  171  1  0   98   32   112 0.598   6.09
 3.00 Prom -  98052  98013   40                              -6.35

 4.02 PlyA -  99086  99081    6                               1.05
 4.01 Sngl - 101140  99998 1143  1  0   77   41   991 0.691  89.45
 4.00 Prom - 104237 104198   40                              -5.55

 5.05 PlyA - 105771 105766    6                               1.05
 5.04 Term - 107881 107816   66  1  0   79   49    77 0.370  -0.14
 5.03 Intr - 116523 116405  119  1  2   66   80    46 0.130   0.86
 5.02 Intr - 116991 116624  368  2  2   42   54   206 0.273   6.46
 5.01 Init - 118577 118528   50  2  2  103   84    14 0.968   2.97
 5.00 Prom - 140088 140049   40                              -3.55

 6.00 Prom + 140685 140724   40                              -4.35
 6.01 Init + 148116 148155   40  2  1   50   89    29 0.316  -2.36
 6.02 Intr + 151002 151078   77  1  2  105   83    40 0.250   3.52
 6.03 Term + 158573 158677  105  1  0   63   54   124 0.612   3.93
 6.04 PlyA + 158680 158685    6                               1.05

 7.02 PlyA - 159987 159982    6                               1.05
 7.01 Sngl - 165160 164126 1035  1  0   64   46   456 0.994  35.85
 7.00 Prom - 165936 165897   40                              -5.05

 8.02 PlyA - 166105 166100    6                               1.05
 8.01 Sngl - 167313 166333  981  0  0   88   43   800 0.992  72.05
 8.00 Prom - 175295 175256   40                              -2.95

 9.02 PlyA - 175638 175633    6                               1.05
 9.01 Term - 176362 176288   75  1  0   79   42   130 0.353   4.36

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_1|433_aa
XSPRINATGQGVTIFYVDRLGYYPYIDSITGVTVNGGIPQKISLQDHLDKAKKDITFYMP
VDNLGMAVIDWEEWRPTWARNWKPKDVYKNRSIELVQQQNVQLSLTEATEKAKQEFEKAG
KDFLVETIKLGKLLRPNHLWGYYLFPDCYNHHYKKPGYNGSCFNVEIKRNDDLSWLWNES
TALYPSIYLNTQQSPVAATLYVRNRVREAIRVSKIPDAKSPLPVFAYTRIVFTDQVLKFL
SQDELVYTFGETVALGASGIVIWGTLSIMRSMKSCLLLDNYMETILNPYIINVTLAAKMC
SQVLCQEQGVCIRKNWNSSDYLHLNPDNFAIQLEKGGKFTVRGKPTLEDLEQFSEKFYCS
CYSTLSCKEKADVKDTDAVDVCIADGVCIDAFLKPPMETEEPQIFYNASPSTLSATMFIV
SILFLIISSVASL

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_1|1302_bp
ngaagcccccgaataaacgccaccgggcaaggtgttacaatattttatgttgatagactt
ggctactatccttacatagattcaatcacaggagtaactgtgaatggaggaatcccccag
aagatttccttacaagaccatctggacaaagctaagaaagacattacattttatatgcca
gtagacaatttgggaatggctgttattgactgggaagaatggagacccacttgggcaaga
aactggaaacctaaagatgtttacaagaataggtctattgaattggttcagcaacaaaat
gtacaacttagtctcacagaggccactgagaaagcaaaacaagaatttgaaaaggcaggg
aaggatttcctggtagagactataaaattgggaaaattacttcggccaaatcacttgtgg
ggttattatctttttccggattgttacaaccatcactataagaaacccggttacaatgga
agttgcttcaatgtagaaataaaaagaaatgatgatctcagctggttgtggaatgaaagc
actgctctttacccatccatttatttgaacactcagcagtctcctgtagctgctacactc
tatgtgcgcaatcgagttcgggaagccatcagagtttccaaaatacctgatgcaaaaagt
ccacttccggtttttgcatatacccgcatagtttttactgatcaagttttgaaattcctt
tctcaagatgaacttgtgtatacatttggcgaaactgttgctctgggtgcttctggaatt
gtaatatggggaaccctcagtataatgcgaagtatgaaatcttgcttgctcctagacaat
tacatggagactatactgaatccttacataatcaacgtcacactagcagccaaaatgtgt
agccaagtgctttgccaggagcaaggagtgtgtataaggaaaaactggaattcaagtgac
tatcttcacctcaacccagataattttgctattcaacttgagaaaggtggaaagttcaca
gtacgtggaaaaccgacacttgaagacctggagcaattttctgaaaaattttattgcagc
tgttatagcaccttgagttgtaaggagaaagctgatgtaaaagacactgatgctgttgat
gtgtgtattgctgatggtgtctgtatagatgcttttctaaaacctcccatggagacagaa
gaacctcaaattttctacaatgcttcaccctccacactatctgccacaatgttcattgtt
agtattttgtttcttatcatttcttctgtagcgagtttgtaa

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_2|134_aa
MISAHCNLCLLSSKDLPTSAYVEELRPQARATIPRHQAKIPAVKEWTAPSTEPQIQCDDK
DPCSWYRLSVYLPFWGLEDCGLLTAPLGSASVGTLCEGSKPTFHLHTPVVEVLHEGSASV
AGFYLDIQAFTYIF

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_2|405_bp
atgatctcggctcactgcaacctctgcctcctgagctcaaaggatcttcccacctcagcc
tatgtggaggagctgagaccacaagcacgtgccaccatacccagacatcaggctaagatc
cctgctgtaaaggagtggacagccccttcaactgaaccccaaattcaatgtgatgacaaa
gatccatgttcatggtacaggctgtcagtgtatctaccattctggggtctggaggactgt
ggccttctcacagctccactaggcagtgcttcagtggggactctgtgtgagggctccaaa
cccacatttcaccttcatactcctgtagtagaggttctccatgagggctctgcctctgta
gcaggcttctacctggacatccaggctttcacatacatcttctag

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_3|218_aa
MAEGKGEASTFFTRQQEREREQWKHQILITRPDLVRTHYHENRKGKIRLQDPIISHQTSL
VTPLGSGKSNVTRDWSGPQAYRSSRTEKWSAVMWVPVPISPHQAGPLGLGLQPPPTRAIE
PAPTQELPGQSIQGQLKASWPLPLQKNCPCHLWTNKGAKALCVLSTPPTICSQPKERRPV
HLPWVPHPLPPMAHHQTGKPWLGSIAQTLYPGLTALSD

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_3|657_bp
atggcggaaggcaaaggagaagcaagcacctttttcacaaggcagcaggagagagagagg
gagcagtggaaacaccagatacttatcacacgaccagatcttgtgagaactcactatcac
gagaacagaaaggggaaaatccgcctccaggatccaatcatctctcaccagacttcactg
gtgacacctctgggttctggaaaatccaacgtgaccagagactggagtgggccccaagca
taccgcagcagccgtacagaaaagtggtcagctgttatgtgggtacctgttcccatatct
cctcaccaggcaggtcctctaggcctgggcctccagccaccacctaccagagctattgag
ccagcaccaactcaggaactccctggacagagcatccaagggcaactgaaagcctcttgg
cccctgcctctgcagaagaactgcccttgccacctttggactaacaaaggcgcaaaggcc
ctttgtgtcttatccacacctccaacaatctgcagtcaacccaaagagagaaggccagtt
catctcccatgggtgccacaccccctaccacccatggctcatcaccagacagggaaaccc
tggcttgggtccatagcacaaaccctctatcctggactgactgcactgagtgattga

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_4|380_aa
MAGSDVDSEGPARRGGAARRPGAPGGPGSEAAAGCPEPLSTAEAPAESATLPAWMRLYFY
GMHGITLDVLVSSARRFARSPDLRMLGFSSPYRCLLHSLTHFALEKVYLQQRRCPNAFVF
NFLLYPSAHVGLQTLAGQALLLSLGGGAGVAVAPGALDLALQYVLALYHCQVFLKRFLRL
RYGRQRRRQQQQQQQQQQQQRRGALPVPPGARVPTAAGARRRRPRGPRGAGGAPSQGLPD
LPRFLFFGMHGFLDEIFFTFFFNVLGQGDGTTSGHTSLWSFFMYGSCSFVVEKLYFHLHY
SRGWGTWKRVPIYVIFIYVWELSWGLGLRTCGACSWDYSHYPLNFMGLITLMYLPGWIFL
SVYQDLISNVLWRVQYVPAN

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_4|1143_bp
atggcggggagcgacgtggacagcgagggccccgcacggaggggcggcgcggcgcggcgt
ccgggggcccctggcgggccaggaagcgaggcggcagccggctgcccggagccgctgtcc
actgctgaagcgccggctgagagcgccacgctgcccgcctggatgcgcctctacttctac
gggatgcacgggatcaccctggacgtgctggtgtcctcggcccggcgcttcgcccgcagc
ccggacctgcggatgctaggcttctcctcgccctaccgctgcctgctgcactcgctcacc
catttcgccctggagaaggtgtacctgcagcagcggcgctgtcccaacgccttcgtcttc
aatttcctcctctacccctcggcccacgtggggctgcagaccctagcgggccaggcgcta
ctactcagcctgggcggcggggcgggggtcgcggtggcgccaggggcgctggacctggcg
ctgcagtacgtgctggcgctctaccactgccaagtgttcctgaagcgcttcctgcgcttg
cggtacgggcgacagaggcggcggcagcagcaacagcagcagcagcagcagcagcagcag
cggaggggcgcgctccccgtccctcccggcgcccgggtccctactgcggccggagcccgg
cggcgacgaccccgtggccccaggggcgccgggggagcccccagccaggggctgcccgac
ctaccccgctttcttttcttcggaatgcacggctttctggatgagatcttcttcaccttc
ttcttcaacgtactggggcagggggacgggacaaccagcggccacacgtcgctctggtcc
ttctttatgtacggcagctgcagtttcgtggtggaaaagctctacttccacctccactac
agccgcggttggggcacttggaagcgggtgcccatctacgtgatcttcatctacgtgtgg
gagctgtcctggggtctgggactccgcacgtgcggggcttgttcctgggactattctcac
tacccgctcaattttatgggcctcatcaccctgatgtatttacctggctggatattcctt
agtgtgtaccaggacctaatttccaacgtgttgtggagggtgcagtacgtaccagctaac
taa

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_5|200_aa
MPLSSDQWAGDESAISRDPSYPELPAANPYGSIATSVLASSEERTRLRGIKQKKRPRQIS
EQEWKFVKKSLEQERKENSLGRNPTRCLKFQQRKRAKRGVFSLDPRTFIRSPLSHDSSPR
VGFPHAQCFPYPLDLGMPSMHPHKVASPWGLYSIKVLMLTGVDHQEMVSLLPNHHQTFPE
PLSMKSQKQPSTEAMFPDEK

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_5|603_bp
atgccactaagttctgaccaatgggctggggatgaaagtgcaatttccagagatccaagt
taccctgagttaccagcggcgaatccgtatgggtccatagcaacttcagtccttgcctcc
tcagaagaaagaactcgactgaggggcataaagcagaaaaagagaccaaggcaaatttca
gagcaggagtggaagtttgttaaaaagtctttagaacaggaaagaaaggaaaattcactt
ggaagaaacccaaccagatgcctgaagttccaacagagaaaaagagctaaaagaggggtc
tttagccttgatcctaggactttcatacgctctcctctttcccatgattcttcccccagg
gtgggcttcccgcatgcgcagtgctttccttaccctttggacctgggcatgccaagcatg
catccccacaaagttgcttctccctggggtctgtattcaattaaggtgttgatgttaaca
ggtgtggaccatcaggaaatggtctctctgttgccgaaccatcaccagacattcccggag
cccctctccatgaaatctcagaaacaaccctcaacggaagcaatgtttcctgatgaaaaa
tag

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_6|73_aa
MILAHSNLHLLGSKQGSPAPRPQTSSGQWPVRNQAAQQEKMQQQGIILEAETGPSPDTKP
KDPFILDFQPPEL

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_6|222_bp
atgatcttggctcactccaacctccacctcctgggttcaaaacaagggtccccagccccc
aggccacaaaccagtagcggtcagtggcctgttaggaaccaggccgcacagcaggagaag
atgcagcaacaaggtatcatcttggaagcagagacagggccttcaccagacaccaaaccc
aaagatcccttcatcttggactttcagcctccagaactgtga

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_7|344_aa
MNKIDRPLARLIKKKREKNQIDAIKNDKGGITTDPTEIQTTVRKYYKHLYANKLENLEEM
DKFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELV
PFLLKLFQSIEKEGILPNSFYEASIILIPKQGRDTTKKENFRPISLMNIDAKILNKIRAN
RIQQHIKKLIHHDQVGFIPGMQGWFNIRKSINVIQHINRTKVKNHMIISIDAEKAFDKIQ
QRFIVKTLNKLGIDGTFLKIIRAIYDKPTANIILNGQKLEAFPLKTGTRQGCPLSPLLFN
IVLEVLARAIRQEKEIKGVQLGKEEVKLSLFADDMIIYLENPIV

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_7|1035_bp
atgaacaaaattgatagaccgctagcaagactaataaagaaaaaaagagagaaaaatcaa
atagatgcaataaaaaatgataaaggaggtatcaccaccgatcccacagaaattcaaact
accgtcagaaaatactacaaacacctctatgcaaataaactagaaaatctagaagaaatg
gataagttcctcgacacatacactctcccaagactaaaccaggaagaagttgaatctctg
aatagaccaataacaggatctgaaattgtggcaataatcaatagcttaccaaccaaaaag
agtccaggaccagatggattcacagccgaattctaccagaggtacaaggaggaactggta
ccattccttctgaaactattccaatcaatagaaaaagagggaatcctccctaactcattt
tatgaggccagcatcatcctgataccaaagcagggcagagacacaaccaaaaaagagaat
tttagaccaatatccttgatgaacatagatgcaaaaatcctcaataaaatacgggcaaac
cgaatccagcagcacatcaaaaagcttatccaccatgatcaagtgggcttcatccctggg
atgcaaggctggttcaatatacgcaaatcaataaatgtaatccagcatataaacagaacc
aaagtcaaaaaccacatgattatctcaatagatgcagaaaaggcctttgacaaaattcaa
caacgcttcattgtaaaaactctcaataaattaggtattgatgggacatttcttaaaata
ataagagctatctatgacaaacccacagccaatatcatactgaatgggcaaaaactggaa
gcattccctttgaaaactggcacaagacagggatgccctctctcaccactcctattcaac
atagtgttggaagttctggccagggcaattaggcaggaaaaggaaataaagggtgttcaa
ttaggaaaagaggaagtcaaattgtccctgtttgcagacgacatgattatatatctagaa
aaccccatcgtctaa

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_8|326_aa
MGKKQSRKTGNSKKQSATPPPKERSSSPAMEQSWMENDFDELREEGFRRSNYSKLQEEIQ
TKGKEVENFEKNLGLKELMELKAKARELREECRSLRSQCTQLEERVSVMEEEMNEMKREG
KFREKRIKRNQQSLQEIWDYVKRPNLHLIGVPESDGENGTKLENTLQDIIQENFPNLARQ
ANVQIQEIERTPQRYSSRRATPRHIIVRFTKVEVKEKMLRAAREKVRVTHKGKPIRVTAD
LSAETLQARREWGPIFNILKEKNLQPSISYPAKLSFISEGEIKYFTDKQMLRDFVTTRPA
LKELLKEALNMERNNQYQLLQNHAKM

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_8|981_bp
atggggaaaaaacagagcagaaaaactggaaactctaaaaagcagagtgccactcctcct
ccaaaggaacgcagttcctcaccagcaatggaacaaagctggatggagaatgactttgac
gagttgagagaagaaggcttcagacgatcaaactactccaagctacaggaggaaattcaa
accaaaggcaaagaagttgaaaactttgaaaaaaatttaggcttaaaggagctgatggag
ctgaaagccaaggctcgagaactacgtgaagaatgcagaagcctcaggagccaatgcact
caactggaagaaagggtatcagtgatggaagaggaaatgaatgaaatgaagcgagaaggg
aagtttagagaaaaaagaataaaaagaaaccaacaaagcctccaagaaatatgggactat
gtgaaaagaccaaatctgcatctgattggtgtacctgaaagtgacggggagaatggaacc
aagttggaaaacactctgcaggatattatccaggagaacttccccaatctagcaaggcag
gccaatgttcagattcaggaaatagagagaacgccacaaagatactcctcgagaagagca
actccaagacacataattgtcagattcaccaaagttgaagtgaaggaaaaaatgttaaga
gcagccagagagaaagttcgggttacccacaaagggaagcccatccgagtaacagcggat
ctctcagcagaaactctacaagccagaagagagtgggggccaatattcaacattcttaaa
gaaaagaatttgcaacccagcatttcatatccagccaaactaagcttcataagtgaagga
gaaataaaatactttacagacaagcaaatgctgagagattttgtcaccaccaggcctgcc
ctaaaagagctcctaaaggaagcactaaacatggaaaggaacaaccagtaccagttgctg
caaaatcatgccaaaatgtaa

>gi568815591r:123931864_124132901|GENSCAN_predicted_peptide_9|24_aa
VLEPGEPAVSSPRAQRPENLKSDI

>gi568815591r:123931864_124132901|GENSCAN_predicted_CDS_9|75_bp
gttttagaacctggagaacctgctgtttcaagtcctcgagcccaaaggccagagaacctg
aagtctgatatctaa