GENSCAN 1.0	Date run:  8-Nov-116	Time: 10:37:47

Sequence gi568815591f:66027704_66252354 : 224651 bp : 46.21% C+G : Isochore 2 (43 - 51 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.01 Intr +  10822  10975  154  0  1   91   42   105 0.022   5.85
 1.02 Term +  16135  16160   26  2  2  106   55    19 0.013  -1.21
 1.03 PlyA +  17747  17752    6                               1.05

 2.02 PlyA -  17791  17786    6                               1.05
 2.01 Sngl -  43615  43262  354  1  0   68   49   286 0.811  18.75
 2.00 Prom -  44654  44615   40                              -8.06

 3.00 Prom +  45967  46006   40                             -10.15
 3.01 Init +  48005  48153  149  1  2   69  105   145 0.998  11.86
 3.02 Intr +  48336  48390   55  0  1   67  105    90 0.745   7.58
 3.03 Intr +  54100  54294  195  0  0   56   75   237 0.775  18.81
 3.04 Intr +  54665  54748   84  1  0   93  102   142 0.999  16.12
 3.05 Intr +  55177  55233   57  0  0  106   49    56 0.857   2.58
 3.06 Intr +  55374  55471   98  2  2  109   69   120 0.999  11.01
 3.07 Intr +  58882  58959   78  1  0  125   83    37 0.976   5.57
 3.08 Intr +  59041  59118   78  1  0  123   90   154 0.980  17.77
 3.09 Intr +  59631  59683   53  0  2   89   94    92 0.979   8.45
 3.10 Intr +  60026  60088   63  0  0   93   92   119 0.971  11.49
 3.11 Intr +  61104  61218  115  1  1   26  115   172 0.963  13.21
 3.12 Intr +  61388  61472   85  2  1   62   88    67 0.698   3.92
 3.13 Intr +  61573  61632   60  0  0  121   80    64 0.995   7.83
 3.14 Intr +  61909  61962   54  0  0  111   37    60 0.668   2.38
 3.15 Intr +  64303  64383   81  0  0   98   98   125 0.997  14.33
 3.16 Intr +  64854  64960  107  2  2   67   96   169 0.992  14.61
 3.17 Term +  65065  65209  145  1  1  119   42   252 0.971  21.08
 3.18 PlyA +  65231  65236    6                               1.05

 4.04 PlyA -  66376  66371    6                               1.05
 4.03 Term -  87757  87609  149  2  2   90   41   170 0.911  10.56
 4.02 Intr -  93027  92874  154  0  1  102   42   105 0.890   6.95
 4.01 Init -  98756  98688   69  2  0   63   80     4 0.041  -1.84
 4.00 Prom - 103244 103205   40                              -2.36

 5.00 Prom + 105945 105984   40                              -6.16
 5.01 Init + 113876 114106  231  1  0   63   75   105 0.761   4.96
 5.02 Intr + 117678 117797  120  2  0   59  105   129 0.725  12.39
 5.03 Term + 124505 124654  150  1  0   94   43   208 0.999  14.81
 5.04 PlyA + 126763 126768    6                               1.05

 6.00 Prom + 130705 130744   40                              -5.36
 6.01 Init + 143245 143318   74  0  2   63  105    22 0.069   1.46
 6.02 Intr + 171195 171256   62  0  2   42  111    72 0.013   3.28
 6.03 Intr + 174804 174931  128  1  2  103  101   -50 0.016  -1.80
 6.04 Intr + 177036 177181  146  2  2   98   86    29 0.608   2.78
 6.05 Intr + 177328 177717  390  1  0   92   77   213 0.290  14.44
 6.06 Term + 196608 196737  130  0  1   97   42   117 0.949   5.65
 6.07 PlyA + 197905 197910    6                               1.05

 7.03 PlyA - 200088 200083    6                               1.05
 7.02 Term - 203744 203539  206  0  2   89   36   137 0.622   6.13
 7.01 Init - 204956 204887   70  2  1   76   77    46 0.519   1.51
 7.00 Prom - 208057 208018   40                              -2.76

 8.00 Prom + 208905 208944   40                              -4.06
 8.01 Sngl + 212723 213571  849  1  0   74   48   518 0.899  42.19
 8.02 PlyA + 214054 214059    6                               1.05


Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

S.001 Init -  16758  16692   67  0  1   87   52    93 0.913   4.87


Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_1|59_aa
MWNLQIWRANCIYFLKSAYKEIHEVQARVVQGSTVSATQGSAKDPKEQTSKVLTVPIKL

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_1|180_bp
atgtggaacctgcagatatggagggccaactgcatttattttttaaaatctgcgtataag
gagatccatgaagttcaagctcgtgttgttcaagggtcaactgtatctgcaactcaaggt
tctgctaaagatcctaaggagcagacttccaaagtgttgactgttcccatcaaactctga

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_2|117_aa
MRLRQAPESRKVFIQRDYSSGTGCQFQTMFSMELENQIDRQQFEEIVQTLNNLYAEAEKL
GGQSYLEGCLACLTAYTIFLCLETHYQKLLKKVSKCIQEQNEKIYVPQGLLLTDSIE

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_2|354_bp
atgaggctgcggcaggcaccagagtccagaaaggtgttcattcagcgagactacagcagt
ggcacaggctgccagttccagaccatgttctccatggagctggagaaccagattgatagg
cagcagtttgaagaaatagttcaaactctaaataacctttatgcagaagcagagaagctt
ggtggccaatcatatctcgaaggttgtttggcttgtttaacagcatataccatcttccta
tgcttggaaactcattaccagaagcttctgaagaaagtctccaaatgcattcaagagcag
aatgagaagatctatgttccacaaggccttctcctgacagactccattgagtaa

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_3|518_aa
MEATPTPPGGLLLARPSPGVGTGPAAADAIPARKALASGGRDTIRAARRRPGGPKLPDDE
EPPNMASESGKLWGGRFVGAVDPIMEKFNASIAYDRHLWEVDVQGSKAYSRGLEKAGLLT
KAEMDQILHGLDKVAEEWAQGTFKLNSNDEDIHTANERRLKELIGATAGKLHTGRSRNDQ
VVTDLRLWMRQTCSTLSGLLWELIRTMVDRAEAERDVLFPGYTHLQRAQPIRWSHWILSH
AVALTRDSERLLEVRKRINVLPLGSGAIAGNPLGVDRELLRAELNFGAITLNSMDATSER
DFVAEFLFWASLCMTHLSRMAEDLILYCTKEFSFVQLSDAYSTGSSLMPQKKNPDSLELI
RSKAGRVFGRCAGLLMTLKGLPSTYNKDLQEDKEAVFEVSDTMSAVLQIHQENMGQALSP
DMLATDLAYYLVRKGMPFRQAHEASGKAVFMAETKGVALNQLSLQELQTISPLFSGDVIC
VWDYGHSVEQYGALGGTARSSVDWQIRQVRALLQAQQA

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_3|1557_bp
atggaggcaacgcccaccccgccgggcggcctcctattggcgcggccgtcgccaggggtg
gggacaggaccggcggctgctgacgccatcccggccagaaaagccctggccagtggcggg
cgcgacactatccgtgcggccaggcggagacccggaggaccgaagcttccggacgacgag
gaaccgcccaacatggcctcggagagtgggaagctttggggtggccggtttgtgggtgca
gtggaccccatcatggagaagttcaacgcgtccattgcctacgaccggcacctttgggag
gtggatgttcaaggcagcaaagcctacagcaggggcctggagaaggcagggctcctcacc
aaggccgagatggaccagatactccatggcctagacaaggtggctgaggagtgggcccag
ggcaccttcaaactgaactccaatgatgaggacatccacacagccaatgagcgccgcctg
aaggagctcattggtgcaacggcagggaagctgcacacgggacggagccggaatgaccag
gtggtcacagacctcaggctgtggatgcggcagacctgctccacgctctcgggcctcctc
tgggagctcattaggaccatggtggatcgggcagaggcggaacgtgatgttctcttcccg
gggtacacccatttgcagagggcccagcccatccgctggagccactggattctgagccac
gccgtggcactgacccgagactctgagcggctgctggaggtgcggaagcggatcaatgtc
ctgcccctggggagtggggccattgcaggcaatcccctgggtgtggaccgagagctgctc
cgagcagaactcaactttggggccatcactctcaacagcatggatgccactagtgagcgg
gactttgtggccgagttcctgttctgggcttcgctgtgcatgacccatctcagcaggatg
gccgaggacctcatcctctactgcaccaaggaattcagcttcgtgcagctctcagatgcc
tacagcacgggaagcagcctgatgccccagaagaaaaaccccgacagtttggagctgatc
cggagcaaggctgggcgtgtgtttgggcggtgtgccgggctcctgatgaccctcaaggga
cttcccagcacctacaacaaagacttacaggaggacaaggaagctgtgtttgaagtgtca
gacactatgagtgccgtgctccagattcaccaagagaacatgggacaggctctcagcccc
gacatgctggccactgaccttgcctattacctggtccgcaaagggatgccattccgccag
gcccacgaggcctccgggaaagctgtgttcatggccgagaccaagggggtcgccctcaac
cagctgtcactgcaggagctgcagaccatcagccccctgttctcgggcgacgtgatctgc
gtgtgggactacgggcacagtgtggagcagtatggtgccctgggcggcactgcgcgctcc
agcgtcgactggcagatccgccaggtgcgggcgctactgcaggcacagcaggcctag

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_4|123_aa
MELWEMRLNWMNGNWSCRILKNQMWNLQIWRANCIYFLKSAYKEIHEVQARVVQGSTVSA
TQGSAKDPKEQTSKVFTAPIKFRGQLFRGLSRGLQLQAELYPALIRLSSTYFQGGQTQAF
IAF

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_4|372_bp
atggaactgtgggaaatgagactgaactggatgaatggaaactggtcatgcagaatcctt
aaaaatcagatgtggaacctgcagatatggagggccaactgcatttattttttaaaatct
gcgtataaggagatccatgaagttcaagctcgtgttgttcaagggtcaactgtatctgca
actcaaggttctgctaaagatcctaaggagcagacttccaaagtgtttactgctcccatc
aaattccgagggcagctcttccgagggctctccaggggcctacagctgcaagcagagctc
tacccggccctgattcgtctctcctccacctactttcagggcggacagactcaggccttt
atagccttctaa

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_5|166_aa
MKKGESDQERIEREGVMEAPRAGSFKEGMISSVRWSRTEEQPLDLSVWRHQALEARTLLV
ITWARARVQGVEKQGKKLSQDSGLRAMRVVNAVLSLHRAEKLQLLNHRPVTAVEIQLMVE
ESEERLTEEQIEALLHTVTSILPAEPEAEQKKNTNSNVAMDEEDPA

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_5|501_bp
atgaagaagggagagtcggatcaggaaagaattgaaagagaaggtgtcatggaagccccg
agggcaggcagttttaaggagggaatgatcagcagtgtcagatggagtaggaccgaggag
cagccgctggatttgtccgtgtggaggcaccaggcccttgaagcaagaacacttttggtg
atcacttgggcaagagctagggtgcagggagttgagaagcaagggaagaagctcagtcag
gactcaggacttagggctatgcgagttgtcaacgctgtactttccctccacagagctgag
aagctccagctgctgaaccaccggcctgtgactgctgtggagatccagctgatggtggaa
gagagtgaagagcggctcacggaggagcagattgaagctcttctccacaccgtcaccagc
attctgcctgcagagccagaggctgagcagaagaagaatacaaacagcaatgtggcaatg
gacgaagaggacccagcatag

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_6|309_aa
MRKSPMQARSQEGTAVRIGAKNKPRSFKRTVRCFPQAIDSLMLYAGLIGGGRIFWAVWEV
ISDLHLYFVERAWQGLCTGGGFRITEAMGVSPPPLWLGGTIARLHSRGDEIVFEFVICIC
ALSPRGDDSFSASSGQSQATRAVARATTRPGLRLPGSPLGSAHGKGCGGAGRLRRQTPAP
RRLPDPAPFPAAPPSVGSRPELTNQSSRHIVRSANRSRCVIPPPPRTLAVVAELATAGDA
AEAASVAGRNGAALRGRSRLAAAGAWRLEVNGETRYRLDFSQQAQWYWLLLFATLVGIMN
GYERQGTSD

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_6|930_bp
atgcggaagtcaccgatgcaggcgaggtcacaggaggggactgcagtcaggattggagcc
aagaacaagccccgaagcttcaagagaactgtgaggtgcttcccgcaggccattgactct
ctgatgctgtatgcaggtcttataggtgggggaaggattttctgggcagtgtgggaggtt
atctcagatctccatctctactttgtggaaagagcctggcaggggctgtgcaccggtggt
ggcttccgtattactgaggccatgggcgtcagccccccacctctgtggttgggagggact
attgcacgtctacactctcgtggggatgaaatagtgtttgagttcgttatttgcatttgc
gcgttatctccccgaggagatgacagcttctctgccagcagcgggcaaagccaggccacg
cgcgctgttgctagggcaaccacccggccaggcctgcggctgccgggaagccccctcggg
agcgcgcacgggaagggctgtgggggcgctggccggctgcgacgtcagacccccgcccct
cggcgcctgccggacccagctccattcccagccgcgcctccttcggtgggcagccggccg
gaactcacgaatcagagcagccgacacatcgtccgctcagccaatcgtagcagatgtgtg
atcccgccacctccccggaccctggcggttgtcgctgagttggcgaccgcgggagacgct
gctgaggcggcttcggttgcgggtcggaacggcgctgctctgcggggccggtccaggctg
gcagctgccggcgcttggcggctagaagtaaatggagaaaccagatacagactggacttt
agtcagcaggcacagtggtattggctgttgctgtttgccacgttggttggcatcatgaat
gggtatgagaggcaaggaactagtgattaa

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_7|91_aa
MGRARWLMPVIPALWEAEAGGSQGSCATPASLTSATPCSTAPSPINHPRPAECERTAWDW
QAAPHAAPVRDPLGEASWAPESGGDVENLYV

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_7|276_bp
atgggccgggcgcggtggctcatgcctgtaatcccagcactttgggaggccgaggcaggt
ggatcacaaggctcctgtgccaccccagcttccctgacaagtgccaccccctgctccacg
gcacccagtcccatcaaccacccaaggcctgcggagtgcgagcgcacagcatgggactgg
caggcagctccacatgcagccccggtgcgggatccactgggcgaagccagctgggctcct
gagtctggtggggacgtggagaacctttatgtctag

>gi568815591f:66027704_66252354|GENSCAN_predicted_peptide_8|282_aa
MVGKLKQNLLLACLVISSVTVFYLGQHAMECHHRIEERSQPVKLESTRTTVRTGLDLKAN
KTFAYHKDMPLIFIGGVPRSGTTLMRAMLDAHPDIRCGEETRVIPRILALKQMWSRSSKE
KIRLDEAGVTDEVLDSAMQAFLLEIIVKHGEPAPYLCNKDPFALKSLTYLSRLFPNAKFL
LMVRDGRASVHSMISRKVTIAGFDLNSYRDCLTKWNRAIETMYNQCMEVGYKKCMLVHYE
QLVLHPERWMRTLLKFLQIPWNHSVLHHEEMIGKAGGVSLSK

>gi568815591f:66027704_66252354|GENSCAN_predicted_CDS_8|849_bp
atggttggaaagctgaagcagaacttactattggcatgtctggtgattagttctgtgact
gtgttttacctgggccagcatgccatggaatgccatcaccggatagaggaacgtagccag
ccagtcaaattggagagcacaaggaccactgtgagaactggcctggacctcaaagccaac
aaaacctttgcctatcacaaagatatgcctttaatatttattggaggtgtgcctcggagt
ggaaccacactcatgagggccatgctggacgcacatcctgacattcgctgtggagaggaa
accagggtcattccccgaatcctggccctgaagcagatgtggtcacggtcaagtaaagag
aagatccgcctggatgaggctggtgttactgatgaagtgctggattctgccatgcaagcc
ttcttactagaaattatcgttaagcatggggagccagccccttatttatgtaataaagat
ccttttgccctgaaatctttaacttacctttctaggttattccccaatgccaaatttctc
ctgatggtccgagatggccgggcatcagtacattcaatgatttctcgaaaagttactata
gctggatttgatctgaacagctatagggactgtttgacaaagtggaatcgtgctatagag
accatgtataaccagtgtatggaggttggttataaaaagtgcatgttggttcactatgaa
caacttgtcttacatcctgaacggtggatgagaacactcttaaagttcctccagattcca
tggaaccactcagtattgcaccatgaagagatgattgggaaagctgggggagtgtctctg
tcaaagtga